RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 SENP3-EIF4A1A0A087X0R7 540 aa24.24■■□□□ 1.47
CDC42-204ENST00000411827 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
CDC42-204ENST00000411827 RGS12O14924 1447 aa24.24■■□□□ 1.47
CDC42-204ENST00000411827 NFATC2IPQ8NCF5 419 aa24.23■■□□□ 1.47
CDC42-204ENST00000411827 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
CDC42-204ENST00000411827 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
CDC42-204ENST00000411827 TSPYL4Q9UJ04 414 aa24.22■■□□□ 1.47
CDC42-204ENST00000411827 SOS1Q07889 1333 aaPredicted RBP24.21■■□□□ 1.47
CDC42-204ENST00000411827 LAS1LQ9Y4W2 734 aaKnown RBP24.2■■□□□ 1.46
CDC42-204ENST00000411827 CT47B1P0C2W7 299 aaPredicted RBP24.19■■□□□ 1.46
CDC42-204ENST00000411827 PRIM1P49642 420 aaKnown RBP24.19■■□□□ 1.46
CDC42-204ENST00000411827 TTC5Q8N0Z6 440 aa24.18■■□□□ 1.46
CDC42-204ENST00000411827 MBIPQ9NS73 344 aa24.18■■□□□ 1.46
CDC42-204ENST00000411827 FANCIQ9NVI1 1328 aa24.17■■□□□ 1.46
CDC42-204ENST00000411827 HMGB2P26583 209 aaKnown RBP24.17■■□□□ 1.46
CDC42-204ENST00000411827 DUSP27Q5VZP5 1158 aa24.17■■□□□ 1.46
CDC42-204ENST00000411827 ZNF790Q6PG37 636 aa24.17■■□□□ 1.46
CDC42-204ENST00000411827 SMARCC1Q92922 1105 aaPredicted RBP24.17■■□□□ 1.46
CDC42-204ENST00000411827 CDCA7LQ96GN5 454 aa24.17■■□□□ 1.46
CDC42-204ENST00000411827 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
CDC42-204ENST00000411827 SIPA1L3O60292 1781 aaPredicted RBP24.16■■□□□ 1.46
CDC42-204ENST00000411827 PIGBQ92521 554 aa24.16■■□□□ 1.46
CDC42-204ENST00000411827 SYTL4Q96C24 671 aaPredicted RBP24.16■■□□□ 1.46
CDC42-204ENST00000411827 BCL11BQ9C0K0 894 aaPredicted RBP24.16■■□□□ 1.46
CDC42-204ENST00000411827 BRWD3Q6RI45 1802 aa24.15■■□□□ 1.46
CDC42-204ENST00000411827 ZNF428Q96B54 188 aa24.15■■□□□ 1.46
CDC42-204ENST00000411827 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
CDC42-204ENST00000411827 EP400Q96L91 3159 aa24.14■■□□□ 1.46
CDC42-204ENST00000411827 CENPBP07199 599 aaPredicted RBP24.14■■□□□ 1.45
CDC42-204ENST00000411827 HOXB7P09629 217 aa24.14■■□□□ 1.45
CDC42-204ENST00000411827 DOT1LQ8TEK3 1739 aa24.13■■□□□ 1.45
CDC42-204ENST00000411827 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
CDC42-204ENST00000411827 ACSBG1Q96GR2 724 aa24.12■■□□□ 1.45
CDC42-204ENST00000411827 FMNL2Q96PY5 1086 aa24.12■■□□□ 1.45
CDC42-204ENST00000411827 NHSQ6T4R5 1651 aa24.11■■□□□ 1.45
CDC42-204ENST00000411827 VSIG10Q8N0Z9 540 aa24.11■■□□□ 1.45
CDC42-204ENST00000411827 TSR2Q969E8 191 aaKnown RBP24.11■■□□□ 1.45
CDC42-204ENST00000411827 ITGB4P16144 1822 aa24.11■■□□□ 1.45
CDC42-204ENST00000411827 EIF4A1P60842 406 aaKnown RBP24.1■■□□□ 1.45
CDC42-204ENST00000411827 MIS18AQ9NYP9 233 aa24.1■■□□□ 1.45
CDC42-204ENST00000411827 TEX13AQ9BXU3 409 aaPredicted RBP24.09■■□□□ 1.45
CDC42-204ENST00000411827 ATG3Q9NT62 314 aa24.09■■□□□ 1.45
CDC42-204ENST00000411827 KDM3BQ7LBC6 1761 aa24.08■■□□□ 1.45
CDC42-204ENST00000411827 FAM182BQ5T319 152 aa24.08■■□□□ 1.45
CDC42-204ENST00000411827 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
CDC42-204ENST00000411827 HEG1Q9ULI3 1381 aa24.07■■□□□ 1.44
CDC42-204ENST00000411827 KCNQ2O43526 872 aa24.07■■□□□ 1.44
CDC42-204ENST00000411827 SNRPA1P09661 255 aaKnown RBP24.07■■□□□ 1.44
CDC42-204ENST00000411827 EXOSC9Q06265 439 aaKnown RBP24.07■■□□□ 1.44
CDC42-204ENST00000411827 SLC39A6Q13433 755 aa24.06■■□□□ 1.44
CDC42-204ENST00000411827 ASAP1Q9ULH1 1129 aa24.06■■□□□ 1.44
CDC42-204ENST00000411827 PAPPAQ13219 1627 aa24.06■■□□□ 1.44
CDC42-204ENST00000411827 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
CDC42-204ENST00000411827 TWISTNBQ3B726 338 aaPredicted RBP24.05■■□□□ 1.44
CDC42-204ENST00000411827 CCDC125Q86Z20 511 aa24.05■■□□□ 1.44
CDC42-204ENST00000411827 ZNF496Q96IT1 587 aaPredicted RBP24.05■■□□□ 1.44
CDC42-204ENST00000411827 GIGYF1O75420 1035 aaPredicted RBP24.04■■□□□ 1.44
CDC42-204ENST00000411827 TRIM37O94972 964 aa24.03■■□□□ 1.44
CDC42-204ENST00000411827 PALLDQ8WX93 1383 aa24.03■■□□□ 1.44
CDC42-204ENST00000411827 KCNQ3O43525 872 aa24.02■■□□□ 1.44
CDC42-204ENST00000411827 C8orf58Q8NAV2 365 aa24.02■■□□□ 1.44
CDC42-204ENST00000411827 SRCAPQ6ZRS2 3230 aa24.02■■□□□ 1.44
CDC42-204ENST00000411827 UBR2Q8IWV8 1755 aa24.01■■□□□ 1.43
CDC42-204ENST00000411827 PLSCR1O15162 318 aa24.01■■□□□ 1.43
CDC42-204ENST00000411827 KCPQ6ZWJ8 1503 aa24■■□□□ 1.43
CDC42-204ENST00000411827 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
CDC42-204ENST00000411827 VAMP4O75379 141 aa24■■□□□ 1.43
CDC42-204ENST00000411827 ALDH1L2Q3SY69 923 aa24■■□□□ 1.43
CDC42-204ENST00000411827 CCDC30Q5VVM6 783 aa24■■□□□ 1.43
CDC42-204ENST00000411827 LOC102724428A0A0B4J2F2 783 aa23.99■■□□□ 1.43
CDC42-204ENST00000411827 STARD3NLO95772 234 aa23.99■■□□□ 1.43
CDC42-204ENST00000411827 SIK1P57059 783 aa23.99■■□□□ 1.43
CDC42-204ENST00000411827 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
CDC42-204ENST00000411827 ERBB4Q15303 1308 aa23.99■■□□□ 1.43
CDC42-204ENST00000411827 ZNF831Q5JPB2 1677 aa23.99■■□□□ 1.43
CDC42-204ENST00000411827 BTAF1O14981 1849 aa23.98■■□□□ 1.43
CDC42-204ENST00000411827 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
CDC42-204ENST00000411827 SLC27A3Q5K4L6 730 aa23.98■■□□□ 1.43
CDC42-204ENST00000411827 RCAN3Q9UKA8 241 aa23.97■■□□□ 1.43
CDC42-204ENST00000411827 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
CDC42-204ENST00000411827 TSPYL6Q8N831 410 aa23.96■■□□□ 1.43
CDC42-204ENST00000411827 STK31Q9BXU1 1019 aa23.96■■□□□ 1.43
CDC42-204ENST00000411827 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
CDC42-204ENST00000411827 APBA3O96018 575 aa23.95■■□□□ 1.42
CDC42-204ENST00000411827 BRPF1P55201 1214 aaPredicted RBP23.95■■□□□ 1.42
CDC42-204ENST00000411827 CICQ96RK0 1608 aaPredicted RBP23.95■■□□□ 1.42
CDC42-204ENST00000411827 ATP6V1AP38606 617 aa23.94■■□□□ 1.42
CDC42-204ENST00000411827 KRT24Q2M2I5 525 aa23.94■■□□□ 1.42
CDC42-204ENST00000411827 DBF4Q9UBU7 674 aaPredicted RBP23.94■■□□□ 1.42
CDC42-204ENST00000411827 RARSP54136 660 aaKnown RBP23.93■■□□□ 1.42
CDC42-204ENST00000411827 PTF1AQ7RTS3 328 aa23.93■■□□□ 1.42
CDC42-204ENST00000411827 CCNL1Q9UK58 526 aaPredicted RBP23.92■■□□□ 1.42
CDC42-204ENST00000411827 BAG6P46379 1132 aa23.91■■□□□ 1.42
CDC42-204ENST00000411827 RGPD3A6NKT7 1758 aaPredicted RBP23.91■■□□□ 1.42
CDC42-204ENST00000411827 RGPD4Q7Z3J3 1758 aa23.91■■□□□ 1.42
CDC42-204ENST00000411827 HYPKQ9NX55 129 aa23.9■■□□□ 1.42
CDC42-204ENST00000411827 USP16Q9Y5T5 823 aa23.9■■□□□ 1.42
CDC42-204ENST00000411827 KIF16BQ96L93 1317 aa23.89■■□□□ 1.42
CDC42-204ENST00000411827 CYP19A1P11511 503 aaPredicted RBP23.89■■□□□ 1.41
CDC42-204ENST00000411827 EIF2S2P20042 333 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 978.6 ms