RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
TTC39A-207ENST00000411642 RTF1Q92541 710 aaKnown RBP13.31□□□□□ -0.28
TTC39A-207ENST00000411642 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
TTC39A-207ENST00000411642 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
TTC39A-207ENST00000411642 PROM2Q8N271 834 aa13.3□□□□□ -0.28
TTC39A-207ENST00000411642 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-207ENST00000411642 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
TTC39A-207ENST00000411642 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
TTC39A-207ENST00000411642 CEMIPQ8WUJ3 1361 aa13.3□□□□□ -0.28
TTC39A-207ENST00000411642 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
TTC39A-207ENST00000411642 HTATSF1O43719 755 aaKnown RBP13.29□□□□□ -0.28
TTC39A-207ENST00000411642 TEFQ10587 303 aa13.29□□□□□ -0.28
TTC39A-207ENST00000411642 MCM10Q7L590 875 aa13.29□□□□□ -0.28
TTC39A-207ENST00000411642 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
TTC39A-207ENST00000411642 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-207ENST00000411642 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
TTC39A-207ENST00000411642 DCTN1Q14203 1278 aa13.28□□□□□ -0.28
TTC39A-207ENST00000411642 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
TTC39A-207ENST00000411642 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-207ENST00000411642 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
TTC39A-207ENST00000411642 TJP1Q07157 1748 aa13.27□□□□□ -0.28
TTC39A-207ENST00000411642 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
TTC39A-207ENST00000411642 KCNQ4P56696 695 aa13.27□□□□□ -0.29
TTC39A-207ENST00000411642 RIPK4P57078 832 aa13.27□□□□□ -0.29
TTC39A-207ENST00000411642 NEUROD2Q15784 382 aa13.27□□□□□ -0.29
TTC39A-207ENST00000411642 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
TTC39A-207ENST00000411642 CICQ96RK0 1608 aaPredicted RBP13.27□□□□□ -0.29
TTC39A-207ENST00000411642 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.29
TTC39A-207ENST00000411642 LOC102724428A0A0B4J2F2 783 aa13.26□□□□□ -0.29
TTC39A-207ENST00000411642 C4BP0C0L5 1744 aa13.26□□□□□ -0.29
TTC39A-207ENST00000411642 SIK1P57059 783 aa13.26□□□□□ -0.29
TTC39A-207ENST00000411642 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
TTC39A-207ENST00000411642 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
TTC39A-207ENST00000411642 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 APAF1O14727 1248 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 NBPF14Q5TI25 921 aa13.25□□□□□ -0.29
TTC39A-207ENST00000411642 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
TTC39A-207ENST00000411642 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
TTC39A-207ENST00000411642 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
TTC39A-207ENST00000411642 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
TTC39A-207ENST00000411642 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
TTC39A-207ENST00000411642 MIER1Q8N108 512 aa13.24□□□□□ -0.29
TTC39A-207ENST00000411642 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
TTC39A-207ENST00000411642 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
TTC39A-207ENST00000411642 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
TTC39A-207ENST00000411642 STK32BQ9NY57 414 aa13.23□□□□□ -0.29
TTC39A-207ENST00000411642 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
TTC39A-207ENST00000411642 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
TTC39A-207ENST00000411642 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
TTC39A-207ENST00000411642 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
TTC39A-207ENST00000411642 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
TTC39A-207ENST00000411642 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
TTC39A-207ENST00000411642 SENP3-EIF4A1A0A087X0R7 540 aa13.21□□□□□ -0.29
TTC39A-207ENST00000411642 ITPK1Q13572 414 aa13.21□□□□□ -0.29
TTC39A-207ENST00000411642 TAF7Q15545 349 aaPredicted RBP13.21□□□□□ -0.29
TTC39A-207ENST00000411642 SLC15A2Q16348 729 aa13.21□□□□□ -0.29
TTC39A-207ENST00000411642 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
TTC39A-207ENST00000411642 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.29
TTC39A-207ENST00000411642 KCNQ3O43525 872 aa13.2□□□□□ -0.3
TTC39A-207ENST00000411642 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
TTC39A-207ENST00000411642 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
TTC39A-207ENST00000411642 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
TTC39A-207ENST00000411642 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-207ENST00000411642 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
TTC39A-207ENST00000411642 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
TTC39A-207ENST00000411642 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
TTC39A-207ENST00000411642 AK7Q96M32 723 aa13.18□□□□□ -0.3
TTC39A-207ENST00000411642 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
TTC39A-207ENST00000411642 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
TTC39A-207ENST00000411642 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
TTC39A-207ENST00000411642 DNAJC10Q8IXB1 793 aa13.17□□□□□ -0.3
TTC39A-207ENST00000411642 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
TTC39A-207ENST00000411642 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
TTC39A-207ENST00000411642 CCDC27Q2M243 656 aa13.16□□□□□ -0.3
TTC39A-207ENST00000411642 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-207ENST00000411642 LAS1LQ9Y4W2 734 aaKnown RBP13.16□□□□□ -0.3
TTC39A-207ENST00000411642 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
TTC39A-207ENST00000411642 GNPATO15228 680 aa13.15□□□□□ -0.3
TTC39A-207ENST00000411642 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
TTC39A-207ENST00000411642 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
TTC39A-207ENST00000411642 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
TTC39A-207ENST00000411642 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
TTC39A-207ENST00000411642 PHF14O94880 888 aa13.14□□□□□ -0.31
TTC39A-207ENST00000411642 CYP19A1P11511 503 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-207ENST00000411642 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
TTC39A-207ENST00000411642 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
TTC39A-207ENST00000411642 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
TTC39A-207ENST00000411642 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
TTC39A-207ENST00000411642 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
TTC39A-207ENST00000411642 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-207ENST00000411642 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 CHL1O00533 1208 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 STARD3NLO95772 234 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
TTC39A-207ENST00000411642 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
TTC39A-207ENST00000411642 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms