RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 SCN11AQ9UI33 1791 aa31.28■■■□□ 2.6
R3HCC1-202ENST00000411463 PLEKHF1Q96S99 279 aa31.27■■■□□ 2.6
R3HCC1-202ENST00000411463 IL17REQ8NFR9 667 aa31.27■■■□□ 2.6
R3HCC1-202ENST00000411463 SRCAPQ6ZRS2 3230 aa31.26■■■□□ 2.6
R3HCC1-202ENST00000411463 ANP32CO43423 234 aa31.25■■■□□ 2.59
R3HCC1-202ENST00000411463 MRC1P22897 1456 aa31.25■■■□□ 2.59
R3HCC1-202ENST00000411463 ADAMTS7Q9UKP4 1686 aa31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 ATP6V1AP38606 617 aa31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 WDR43Q15061 677 aaKnown RBP eCLIP31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 RBM42Q9BTD8 480 aaKnown RBP31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 PDGFDQ9GZP0 370 aaPredicted RBP31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 TFCP2L1Q9NZI6 479 aa31.24■■■□□ 2.59
R3HCC1-202ENST00000411463 MAPK8IP3Q9UPT6 1336 aa31.23■■■□□ 2.59
R3HCC1-202ENST00000411463 TEFQ10587 303 aa31.22■■■□□ 2.59
R3HCC1-202ENST00000411463 RTF1Q92541 710 aaKnown RBP31.22■■■□□ 2.59
R3HCC1-202ENST00000411463 PTCD1O75127 700 aaKnown RBP31.21■■■□□ 2.59
R3HCC1-202ENST00000411463 ITPK1Q13572 414 aa31.21■■■□□ 2.59
R3HCC1-202ENST00000411463 CEMIPQ8WUJ3 1361 aa31.2■■■□□ 2.59
R3HCC1-202ENST00000411463 SLC4A9Q96Q91 983 aa31.2■■■□□ 2.58
R3HCC1-202ENST00000411463 HTATSF1O43719 755 aaKnown RBP31.19■■■□□ 2.58
R3HCC1-202ENST00000411463 LINC00116Q8NCU8 138 aa31.18■■■□□ 2.58
R3HCC1-202ENST00000411463 C5P01031 1676 aa31.18■■■□□ 2.58
R3HCC1-202ENST00000411463 SLC39A6Q13433 755 aa31.17■■■□□ 2.58
R3HCC1-202ENST00000411463 NFE2L2Q16236 605 aa31.17■■■□□ 2.58
R3HCC1-202ENST00000411463 MCM10Q7L590 875 aa31.17■■■□□ 2.58
R3HCC1-202ENST00000411463 ADAMTS8Q9UP79 889 aa31.17■■■□□ 2.58
R3HCC1-202ENST00000411463 PNPLA7Q6ZV29 1317 aa31.16■■■□□ 2.58
R3HCC1-202ENST00000411463 AK7Q96M32 723 aa31.15■■■□□ 2.58
R3HCC1-202ENST00000411463 SPON1Q9HCB6 807 aa31.14■■■□□ 2.58
R3HCC1-202ENST00000411463 CASZ1Q86V15 1759 aa31.14■■■□□ 2.58
R3HCC1-202ENST00000411463 ZBTB7AO95365 584 aa31.14■■■□□ 2.57
R3HCC1-202ENST00000411463 DCTN1Q14203 1278 aa31.14■■■□□ 2.57
R3HCC1-202ENST00000411463 C4BP0C0L5 1744 aa31.12■■■□□ 2.57
R3HCC1-202ENST00000411463 TAF1LQ8IZX4 1826 aa31.12■■■□□ 2.57
R3HCC1-202ENST00000411463 CCDC146Q8IYE0 955 aa31.12■■■□□ 2.57
R3HCC1-202ENST00000411463 TTC5Q8N0Z6 440 aa31.12■■■□□ 2.57
R3HCC1-202ENST00000411463 LRP5O75197 1615 aa31.11■■■□□ 2.57
R3HCC1-202ENST00000411463 CCDC184Q52MB2 194 aa31.11■■■□□ 2.57
R3HCC1-202ENST00000411463 VIRMAQ69YN4 1812 aaKnown RBP31.11■■■□□ 2.57
R3HCC1-202ENST00000411463 ZNF831Q5JPB2 1677 aa31.1■■■□□ 2.57
R3HCC1-202ENST00000411463 RUNDC1Q96C34 613 aa31.1■■■□□ 2.57
R3HCC1-202ENST00000411463 MTFR1LQ9H019 292 aa31.1■■■□□ 2.57
R3HCC1-202ENST00000411463 ZNF790Q6PG37 636 aa31.09■■■□□ 2.57
R3HCC1-202ENST00000411463 FLAD1Q8NFF5 587 aa31.09■■■□□ 2.57
R3HCC1-202ENST00000411463 BTBD11A6QL63 1104 aa31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 COL23A1Q86Y22 540 aaPredicted RBP31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 SLC16A10Q8TF71 515 aa31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 ATF5Q9Y2D1 282 aaPredicted RBP31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 GNPATO15228 680 aa31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 MSH5O43196 834 aa31.08■■■□□ 2.57
R3HCC1-202ENST00000411463 TMPOP42166 694 aaKnown RBP31.07■■■□□ 2.56
R3HCC1-202ENST00000411463 RIPK4P57078 832 aa31.07■■■□□ 2.56
R3HCC1-202ENST00000411463 QSER1Q2KHR3 1735 aa31.06■■■□□ 2.56
R3HCC1-202ENST00000411463 KCPQ6ZWJ8 1503 aa31.06■■■□□ 2.56
R3HCC1-202ENST00000411463 RC3H1Q5TC82 1133 aaKnown RBP31.06■■■□□ 2.56
R3HCC1-202ENST00000411463 AMIGO3Q86WK7 504 aa31.06■■■□□ 2.56
R3HCC1-202ENST00000411463 CNTNAP4Q9C0A0 1308 aa31.05■■■□□ 2.56
R3HCC1-202ENST00000411463 VSIG10Q8N0Z9 540 aa31.05■■■□□ 2.56
R3HCC1-202ENST00000411463 MRS2Q9HD23 443 aa31.05■■■□□ 2.56
R3HCC1-202ENST00000411463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.04■■■□□ 2.56
R3HCC1-202ENST00000411463 PHF14O94880 888 aa31.04■■■□□ 2.56
R3HCC1-202ENST00000411463 SSFA2P28290 1259 aa31.04■■■□□ 2.56
R3HCC1-202ENST00000411463 DNAJC10Q8IXB1 793 aa31.04■■■□□ 2.56
R3HCC1-202ENST00000411463 TUBGCP6Q96RT7 1819 aa31.03■■■□□ 2.56
R3HCC1-202ENST00000411463 SIPA1L3O60292 1781 aaPredicted RBP31.03■■■□□ 2.56
R3HCC1-202ENST00000411463 TAF7Q15545 349 aaPredicted RBP31.03■■■□□ 2.56
R3HCC1-202ENST00000411463 ZNF496Q96IT1 587 aaPredicted RBP31.03■■■□□ 2.56
R3HCC1-202ENST00000411463 SMIM5Q71RC9 77 aa31.02■■■□□ 2.56
R3HCC1-202ENST00000411463 RRP7AQ9Y3A4 280 aaKnown RBP31.02■■■□□ 2.56
R3HCC1-202ENST00000411463 CRKLP46109 303 aaKnown RBP31.01■■■□□ 2.56
R3HCC1-202ENST00000411463 THUMPD2Q9BTF0 503 aaKnown RBP31.01■■■□□ 2.56
R3HCC1-202ENST00000411463 RTCBQ9Y3I0 505 aaKnown RBP31.01■■■□□ 2.56
R3HCC1-202ENST00000411463 KCNQ3O43525 872 aa31.01■■■□□ 2.55
R3HCC1-202ENST00000411463 PTGER2P43116 358 aa31.01■■■□□ 2.55
R3HCC1-202ENST00000411463 LMOD3Q0VAK6 560 aa31.01■■■□□ 2.55
R3HCC1-202ENST00000411463 NEUROD2Q15784 382 aa31.01■■■□□ 2.55
R3HCC1-202ENST00000411463 FMNL2Q96PY5 1086 aa31.01■■■□□ 2.55
R3HCC1-202ENST00000411463 RPS6KA4O75676 772 aa30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 PNISRQ8TF01 805 aaKnown RBP30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 PPP1R1BQ9UD71 204 aaPredicted RBP30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 CICQ96RK0 1608 aaPredicted RBP30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 HEG1Q9ULI3 1381 aa30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 COL5A3P25940 1745 aaPredicted RBP30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 DLG5Q8TDM6 1919 aa30.99■■■□□ 2.55
R3HCC1-202ENST00000411463 TJP1Q07157 1748 aa30.98■■■□□ 2.55
R3HCC1-202ENST00000411463 CYP19A1P11511 503 aaPredicted RBP30.98■■■□□ 2.55
R3HCC1-202ENST00000411463 UBR2Q8IWV8 1755 aa30.98■■■□□ 2.55
R3HCC1-202ENST00000411463 SGIP1Q9BQI5 828 aa30.97■■■□□ 2.55
R3HCC1-202ENST00000411463 UBR3Q6ZT12 1888 aa30.97■■■□□ 2.55
R3HCC1-202ENST00000411463 TRAPPC3LQ5T215 181 aa30.96■■■□□ 2.55
R3HCC1-202ENST00000411463 INTS5Q6P9B9 1019 aaKnown RBP30.96■■■□□ 2.55
R3HCC1-202ENST00000411463 CCDC87Q9NVE4 849 aa30.96■■■□□ 2.55
R3HCC1-202ENST00000411463 MIS18AQ9NYP9 233 aa30.96■■■□□ 2.55
R3HCC1-202ENST00000411463 TEX13AQ9BXU3 409 aaPredicted RBP30.95■■■□□ 2.55
R3HCC1-202ENST00000411463 ADRA2BP18089 450 aa30.95■■■□□ 2.54
R3HCC1-202ENST00000411463 STARD3NLO95772 234 aa30.94■■■□□ 2.54
R3HCC1-202ENST00000411463 APAF1O14727 1248 aa30.93■■■□□ 2.54
R3HCC1-202ENST00000411463 POLD1P28340 1107 aa30.93■■■□□ 2.54
R3HCC1-202ENST00000411463 ARHGEF1Q92888 912 aaKnown RBP30.92■■■□□ 2.54
R3HCC1-202ENST00000411463 TRIM35Q9UPQ4 493 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms