RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 TSPYL4Q9UJ04 414 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
RN7SKP54-201ENST00000410704 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
RN7SKP54-201ENST00000410704 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
RN7SKP54-201ENST00000410704 TOGARAM1Q9Y4F4 1720 aa13.11□□□□□ -0.31
RN7SKP54-201ENST00000410704 CHL1O00533 1208 aa13.11□□□□□ -0.31
RN7SKP54-201ENST00000410704 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
RN7SKP54-201ENST00000410704 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
RN7SKP54-201ENST00000410704 PIGBQ92521 554 aa13.1□□□□□ -0.31
RN7SKP54-201ENST00000410704 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
RN7SKP54-201ENST00000410704 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
RN7SKP54-201ENST00000410704 MIS18AQ9NYP9 233 aa13.1□□□□□ -0.31
RN7SKP54-201ENST00000410704 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
RN7SKP54-201ENST00000410704 KCNQ2O43526 872 aa13.09□□□□□ -0.31
RN7SKP54-201ENST00000410704 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
RN7SKP54-201ENST00000410704 SIPA1L3O60292 1781 aaPredicted RBP13.09□□□□□ -0.31
RN7SKP54-201ENST00000410704 NHSQ6T4R5 1651 aa13.08□□□□□ -0.31
RN7SKP54-201ENST00000410704 ZNF790Q6PG37 636 aa13.08□□□□□ -0.32
RN7SKP54-201ENST00000410704 TRMT2AQ8IZ69 625 aaKnown RBP13.08□□□□□ -0.32
RN7SKP54-201ENST00000410704 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP54-201ENST00000410704 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
RN7SKP54-201ENST00000410704 ITGB4P16144 1822 aa13.08□□□□□ -0.32
RN7SKP54-201ENST00000410704 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
RN7SKP54-201ENST00000410704 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
RN7SKP54-201ENST00000410704 TRIM37O94972 964 aa13.06□□□□□ -0.32
RN7SKP54-201ENST00000410704 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
RN7SKP54-201ENST00000410704 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
RN7SKP54-201ENST00000410704 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
RN7SKP54-201ENST00000410704 KDM3BQ7LBC6 1761 aa13.06□□□□□ -0.32
RN7SKP54-201ENST00000410704 KCNQ3O43525 872 aa13.05□□□□□ -0.32
RN7SKP54-201ENST00000410704 EIF4A1P60842 406 aaKnown RBP13.05□□□□□ -0.32
RN7SKP54-201ENST00000410704 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
RN7SKP54-201ENST00000410704 SBF2Q86WG5 1849 aa13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 PAPPAQ13219 1627 aa13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
RN7SKP54-201ENST00000410704 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
RN7SKP54-201ENST00000410704 BTAF1O14981 1849 aa13.02□□□□□ -0.32
RN7SKP54-201ENST00000410704 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 APBA3O96018 575 aa13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 HOXB7P09629 217 aa13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
RN7SKP54-201ENST00000410704 GIGYF1O75420 1035 aaPredicted RBP13.01□□□□□ -0.33
RN7SKP54-201ENST00000410704 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
RN7SKP54-201ENST00000410704 TEX13AQ9BXU3 409 aaPredicted RBP13.01□□□□□ -0.33
RN7SKP54-201ENST00000410704 UBR2Q8IWV8 1755 aa13.01□□□□□ -0.33
RN7SKP54-201ENST00000410704 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
RN7SKP54-201ENST00000410704 SIK1P57059 783 aa13□□□□□ -0.33
RN7SKP54-201ENST00000410704 TSPYL6Q8N831 410 aa13□□□□□ -0.33
RN7SKP54-201ENST00000410704 ZNF428Q96B54 188 aa13□□□□□ -0.33
RN7SKP54-201ENST00000410704 VAMP4O75379 141 aa12.99□□□□□ -0.33
RN7SKP54-201ENST00000410704 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
RN7SKP54-201ENST00000410704 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
RN7SKP54-201ENST00000410704 HDGFL1Q5TGJ6 251 aa12.99□□□□□ -0.33
RN7SKP54-201ENST00000410704 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
RN7SKP54-201ENST00000410704 STARD3NLO95772 234 aa12.98□□□□□ -0.33
RN7SKP54-201ENST00000410704 EIF2S2P20042 333 aaKnown RBP12.98□□□□□ -0.33
RN7SKP54-201ENST00000410704 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
RN7SKP54-201ENST00000410704 STK31Q9BXU1 1019 aa12.98□□□□□ -0.33
RN7SKP54-201ENST00000410704 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP54-201ENST00000410704 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 PLSCR1O15162 318 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 BAG6P46379 1132 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 RCAN3Q9UKA8 241 aa12.97□□□□□ -0.33
RN7SKP54-201ENST00000410704 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.33
RN7SKP54-201ENST00000410704 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
RN7SKP54-201ENST00000410704 SLC4A9Q96Q91 983 aa12.96□□□□□ -0.33
RN7SKP54-201ENST00000410704 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
RN7SKP54-201ENST00000410704 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
RN7SKP54-201ENST00000410704 LAMB4A4D0S4 1761 aa12.95□□□□□ -0.34
RN7SKP54-201ENST00000410704 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
RN7SKP54-201ENST00000410704 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
RN7SKP54-201ENST00000410704 LY75O60449 1722 aa12.95□□□□□ -0.34
RN7SKP54-201ENST00000410704 C5P01031 1676 aa12.95□□□□□ -0.34
RN7SKP54-201ENST00000410704 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
RN7SKP54-201ENST00000410704 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
RN7SKP54-201ENST00000410704 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
RN7SKP54-201ENST00000410704 ITPK1Q13572 414 aa12.94□□□□□ -0.34
RN7SKP54-201ENST00000410704 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms