RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 MTHFSDQ2M296 383 aaKnown RBP29.55■■■□□ 2.32
PMS1-205ENST00000409985 TBC1D9Q6ZT07 1266 aa29.55■■■□□ 2.32
PMS1-205ENST00000409985 FBXO41Q8TF61 875 aa29.55■■■□□ 2.32
PMS1-205ENST00000409985 CIZ1Q9ULV3 898 aaPredicted RBP29.55■■■□□ 2.32
PMS1-205ENST00000409985 AMPHP49418 695 aa29.54■■■□□ 2.32
PMS1-205ENST00000409985 PLEKHM2Q8IWE5 1019 aa29.54■■■□□ 2.32
PMS1-205ENST00000409985 DDIT3P35638 169 aa29.53■■■□□ 2.32
PMS1-205ENST00000409985 CEP85Q6P2H3 762 aa29.53■■■□□ 2.32
PMS1-205ENST00000409985 CCT4P50991 539 aaKnown RBP29.53■■■□□ 2.32
PMS1-205ENST00000409985 EYA1Q99502 592 aa29.53■■■□□ 2.32
PMS1-205ENST00000409985 MCM4P33991 863 aa29.51■■■□□ 2.31
PMS1-205ENST00000409985 ZC3H6P61129 1189 aaKnown RBP29.51■■■□□ 2.31
PMS1-205ENST00000409985 KRT24Q2M2I5 525 aa29.51■■■□□ 2.31
PMS1-205ENST00000409985 TSPYL4Q9UJ04 414 aa29.51■■■□□ 2.31
PMS1-205ENST00000409985 JCADQ9P266 1359 aa29.5■■■□□ 2.31
PMS1-205ENST00000409985 SLC4A2P04920 1241 aa29.5■■■□□ 2.31
PMS1-205ENST00000409985 KIF2CQ99661 725 aa29.5■■■□□ 2.31
PMS1-205ENST00000409985 LTN1O94822 1766 aa29.5■■■□□ 2.31
PMS1-205ENST00000409985 HMMRO75330 724 aa29.49■■■□□ 2.31
PMS1-205ENST00000409985 TTC22Q5TAA0 569 aa29.49■■■□□ 2.31
PMS1-205ENST00000409985 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
PMS1-205ENST00000409985 ARHGEF25Q86VW2 580 aa29.48■■■□□ 2.31
PMS1-205ENST00000409985 CACNA1FO60840 1977 aa29.48■■■□□ 2.31
PMS1-205ENST00000409985 GSPT1P15170 499 aaKnown RBP29.46■■■□□ 2.31
PMS1-205ENST00000409985 HOXC9P31274 260 aa29.45■■■□□ 2.31
PMS1-205ENST00000409985 GNAT3A8MTJ3 354 aa29.44■■■□□ 2.3
PMS1-205ENST00000409985 AXIN2Q9Y2T1 843 aa29.43■■■□□ 2.3
PMS1-205ENST00000409985 COL18A1P39060 1754 aa29.43■■■□□ 2.3
PMS1-205ENST00000409985 LRP6O75581 1613 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 CHRNA2Q15822 529 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 L1TD1Q5T7N2 865 aaKnown RBP29.42■■■□□ 2.3
PMS1-205ENST00000409985 MEIS3Q99687 375 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 STK31Q9BXU1 1019 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 CPDO75976 1380 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 N4BP2Q86UW6 1770 aaPredicted RBP29.42■■■□□ 2.3
PMS1-205ENST00000409985 NUTM2BA6NNL0 878 aaPredicted RBP29.42■■■□□ 2.3
PMS1-205ENST00000409985 DDX11L8A8MPP1 907 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 NUTM2EB1AL46 878 aaPredicted RBP29.42■■■□□ 2.3
PMS1-205ENST00000409985 CCDC30Q5VVM6 783 aa29.42■■■□□ 2.3
PMS1-205ENST00000409985 NUTM2AQ8IVF1 878 aaPredicted RBP29.42■■■□□ 2.3
PMS1-205ENST00000409985 ZBTB7CA1YPR0 619 aa29.41■■■□□ 2.3
PMS1-205ENST00000409985 OSBPL3Q9H4L5 887 aa29.41■■■□□ 2.3
PMS1-205ENST00000409985 FAM208AQ9UK61 1670 aaKnown RBP29.41■■■□□ 2.3
PMS1-205ENST00000409985 MAP3K5Q99683 1374 aa29.4■■■□□ 2.3
PMS1-205ENST00000409985 PXDNLA1KZ92 1463 aa29.4■■■□□ 2.3
PMS1-205ENST00000409985 RGPD5Q99666 1765 aa29.39■■■□□ 2.3
PMS1-205ENST00000409985 HSP90AB1P08238 724 aaKnown RBP29.39■■■□□ 2.3
PMS1-205ENST00000409985 PTMSP20962 102 aa29.39■■■□□ 2.3
PMS1-205ENST00000409985 K7ELQ4 463 aaPredicted RBP29.38■■■□□ 2.29
PMS1-205ENST00000409985 ADAMTS2O95450 1211 aa29.38■■■□□ 2.29
PMS1-205ENST00000409985 CASC1Q6TDU7 716 aa29.38■■■□□ 2.29
PMS1-205ENST00000409985 GNAI3P08754 354 aa29.37■■■□□ 2.29
PMS1-205ENST00000409985 RABEP1Q15276 862 aa29.37■■■□□ 2.29
PMS1-205ENST00000409985 SPRYD3Q8NCJ5 442 aa29.37■■■□□ 2.29
PMS1-205ENST00000409985 GNAI2P04899 355 aa29.36■■■□□ 2.29
PMS1-205ENST00000409985 CHMP4AQ9BY43 222 aa29.36■■■□□ 2.29
PMS1-205ENST00000409985 LMO7Q8WWI1 1683 aa29.36■■■□□ 2.29
PMS1-205ENST00000409985 IP6K1Q92551 441 aa29.36■■■□□ 2.29
PMS1-205ENST00000409985 MIS18AQ9NYP9 233 aa29.36■■■□□ 2.29
PMS1-205ENST00000409985 SPATA31A6Q5VVP1 1343 aa29.35■■■□□ 2.29
PMS1-205ENST00000409985 TAF7Q15545 349 aaPredicted RBP29.35■■■□□ 2.29
PMS1-205ENST00000409985 G2E3Q7L622 706 aa29.35■■■□□ 2.29
PMS1-205ENST00000409985 IL27Q8NEV9 243 aa29.35■■■□□ 2.29
PMS1-205ENST00000409985 PRDM11Q9NQV5 511 aa29.35■■■□□ 2.29
PMS1-205ENST00000409985 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
PMS1-205ENST00000409985 RAB3GAP1Q15042 981 aa29.34■■■□□ 2.29
PMS1-205ENST00000409985 USP26Q9BXU7 913 aa29.34■■■□□ 2.29
PMS1-205ENST00000409985 FLIIQ13045 1269 aa29.32■■■□□ 2.28
PMS1-205ENST00000409985 C16orf71Q8IYS4 520 aaPredicted RBP29.31■■■□□ 2.28
PMS1-205ENST00000409985 BRPF3Q9ULD4 1205 aa29.31■■■□□ 2.28
PMS1-205ENST00000409985 ISY1Q9ULR0 285 aaKnown RBP29.31■■■□□ 2.28
PMS1-205ENST00000409985 SDSP20132 328 aa29.31■■■□□ 2.28
PMS1-205ENST00000409985 GBP4Q96PP9 640 aa29.31■■■□□ 2.28
PMS1-205ENST00000409985 TRAK2O60296 914 aa29.3■■■□□ 2.28
PMS1-205ENST00000409985 IL17REQ8NFR9 667 aa29.3■■■□□ 2.28
PMS1-205ENST00000409985 CLEC17AQ6ZS10 378 aa29.29■■■□□ 2.28
PMS1-205ENST00000409985 CEMIPQ8WUJ3 1361 aa29.29■■■□□ 2.28
PMS1-205ENST00000409985 REC8O95072 547 aa29.29■■■□□ 2.28
PMS1-205ENST00000409985 FSD2A1L4K1 749 aa29.28■■■□□ 2.28
PMS1-205ENST00000409985 HOXB7P09629 217 aa29.28■■■□□ 2.28
PMS1-205ENST00000409985 SLC4A10Q6U841 1118 aa29.28■■■□□ 2.28
PMS1-205ENST00000409985 COL14A1Q05707 1796 aaKnown RBP29.27■■■□□ 2.28
PMS1-205ENST00000409985 F6X3S4 739 aa29.27■■■□□ 2.28
PMS1-205ENST00000409985 ATP8B2P98198 1209 aa29.27■■■□□ 2.28
PMS1-205ENST00000409985 SKOR2Q2VWA4 1001 aaPredicted RBP29.27■■■□□ 2.28
PMS1-205ENST00000409985 LTV1Q96GA3 475 aaPredicted RBP29.27■■■□□ 2.28
PMS1-205ENST00000409985 ABCC6O95255 1503 aa29.26■■■□□ 2.27
PMS1-205ENST00000409985 PLCH1Q4KWH8 1693 aa29.26■■■□□ 2.27
PMS1-205ENST00000409985 TNPO1Q92973 898 aaKnown RBP29.25■■■□□ 2.27
PMS1-205ENST00000409985 RGPD2P0DJD1 1756 aa29.25■■■□□ 2.27
PMS1-205ENST00000409985 SALL3Q9BXA9 1300 aa29.25■■■□□ 2.27
PMS1-205ENST00000409985 HSP90AA1P07900 732 aaKnown RBP29.25■■■□□ 2.27
PMS1-205ENST00000409985 PDE1AP54750 535 aa29.25■■■□□ 2.27
PMS1-205ENST00000409985 FKBP5Q13451 457 aaPredicted RBP29.25■■■□□ 2.27
PMS1-205ENST00000409985 OTUD7AQ8TE49 926 aaPredicted RBP29.25■■■□□ 2.27
PMS1-205ENST00000409985 ERBB3P21860 1342 aa29.24■■■□□ 2.27
PMS1-205ENST00000409985 CD2BP2O95400 341 aaKnown RBP29.24■■■□□ 2.27
PMS1-205ENST00000409985 BTG4Q9NY30 223 aa29.24■■■□□ 2.27
PMS1-205ENST00000409985 COL5A2P05997 1499 aaPredicted RBP29.24■■■□□ 2.27
PMS1-205ENST00000409985 SMARCA5O60264 1052 aaPredicted RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms