RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 SF3B2Q13435 895 aaKnown RBP26.94■■□□□ 1.9
C4orf48-202ENST00000409860 KAT6BQ8WYB5 2073 aa26.94■■□□□ 1.9
C4orf48-202ENST00000409860 BTBD11A6QL63 1104 aa26.93■■□□□ 1.9
C4orf48-202ENST00000409860 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
C4orf48-202ENST00000409860 CCDC125Q86Z20 511 aa26.92■■□□□ 1.9
C4orf48-202ENST00000409860 SMARCC1Q92922 1105 aaPredicted RBP26.92■■□□□ 1.9
C4orf48-202ENST00000409860 ITGB4P16144 1822 aa26.91■■□□□ 1.9
C4orf48-202ENST00000409860 BABAM1Q9NWV8 329 aa26.91■■□□□ 1.9
C4orf48-202ENST00000409860 IL16Q14005 1332 aa26.9■■□□□ 1.9
C4orf48-202ENST00000409860 ZNF521Q96K83 1311 aa26.9■■□□□ 1.9
C4orf48-202ENST00000409860 VIRMAQ69YN4 1812 aaKnown RBP26.9■■□□□ 1.9
C4orf48-202ENST00000409860 APBA3O96018 575 aa26.9■■□□□ 1.9
C4orf48-202ENST00000409860 IFT57Q9NWB7 429 aa26.9■■□□□ 1.9
C4orf48-202ENST00000409860 LAS1LQ9Y4W2 734 aaKnown RBP26.9■■□□□ 1.9
C4orf48-202ENST00000409860 GNAI1P63096 354 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 TTC5Q8N0Z6 440 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 CFAP44Q96MT7 982 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 ATG3Q9NT62 314 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 TSPYL4Q9UJ04 414 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 ASAP1Q9ULH1 1129 aa26.89■■□□□ 1.9
C4orf48-202ENST00000409860 SLC39A6Q13433 755 aa26.88■■□□□ 1.89
C4orf48-202ENST00000409860 PALLDQ8WX93 1383 aa26.87■■□□□ 1.89
C4orf48-202ENST00000409860 ZNF790Q6PG37 636 aa26.87■■□□□ 1.89
C4orf48-202ENST00000409860 MIS18AQ9NYP9 233 aa26.87■■□□□ 1.89
C4orf48-202ENST00000409860 BTAF1O14981 1849 aa26.87■■□□□ 1.89
C4orf48-202ENST00000409860 SIPA1L3O60292 1781 aaPredicted RBP26.86■■□□□ 1.89
C4orf48-202ENST00000409860 CHL1O00533 1208 aa26.86■■□□□ 1.89
C4orf48-202ENST00000409860 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
C4orf48-202ENST00000409860 EP400Q96L91 3159 aa26.86■■□□□ 1.89
C4orf48-202ENST00000409860 ZBED9Q6R2W3 1325 aa26.86■■□□□ 1.89
C4orf48-202ENST00000409860 TNS1Q9HBL0 1735 aaKnown RBP26.85■■□□□ 1.89
C4orf48-202ENST00000409860 ZNF853P0CG23 659 aa26.85■■□□□ 1.89
C4orf48-202ENST00000409860 BAG6P46379 1132 aa26.85■■□□□ 1.89
C4orf48-202ENST00000409860 GOLGA2Q08379 1002 aa26.85■■□□□ 1.89
C4orf48-202ENST00000409860 PLSCR1O15162 318 aa26.84■■□□□ 1.89
C4orf48-202ENST00000409860 YTHDC1Q96MU7 727 aaKnown RBP26.83■■□□□ 1.89
C4orf48-202ENST00000409860 KCNQ3O43525 872 aa26.82■■□□□ 1.88
C4orf48-202ENST00000409860 MYH16Q9H6N6 1097 aa26.82■■□□□ 1.88
C4orf48-202ENST00000409860 MBIPQ9NS73 344 aa26.82■■□□□ 1.88
C4orf48-202ENST00000409860 PAPPAQ13219 1627 aa26.82■■□□□ 1.88
C4orf48-202ENST00000409860 PTCD1O75127 700 aaKnown RBP26.81■■□□□ 1.88
C4orf48-202ENST00000409860 FMNL2Q96PY5 1086 aa26.81■■□□□ 1.88
C4orf48-202ENST00000409860 RBM42Q9BTD8 480 aaKnown RBP26.81■■□□□ 1.88
C4orf48-202ENST00000409860 E9PSI1 815 aa26.8■■□□□ 1.88
C4orf48-202ENST00000409860 LOC102724428A0A0B4J2F2 783 aa26.79■■□□□ 1.88
C4orf48-202ENST00000409860 SIK1P57059 783 aa26.79■■□□□ 1.88
C4orf48-202ENST00000409860 ZNF496Q96IT1 587 aaPredicted RBP26.79■■□□□ 1.88
C4orf48-202ENST00000409860 KCPQ6ZWJ8 1503 aa26.78■■□□□ 1.88
C4orf48-202ENST00000409860 KDM3BQ7LBC6 1761 aa26.77■■□□□ 1.88
C4orf48-202ENST00000409860 FANCIQ9NVI1 1328 aa26.77■■□□□ 1.88
C4orf48-202ENST00000409860 EIF4A1P60842 406 aaKnown RBP26.77■■□□□ 1.88
C4orf48-202ENST00000409860 EN1Q05925 392 aaPredicted RBP26.77■■□□□ 1.88
C4orf48-202ENST00000409860 DEFB132Q7Z7B7 95 aa26.77■■□□□ 1.88
C4orf48-202ENST00000409860 TSR2Q969E8 191 aaKnown RBP26.77■■□□□ 1.88
C4orf48-202ENST00000409860 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
C4orf48-202ENST00000409860 CCNL1Q9UK58 526 aaPredicted RBP26.77■■□□□ 1.88
C4orf48-202ENST00000409860 HEG1Q9ULI3 1381 aa26.76■■□□□ 1.87
C4orf48-202ENST00000409860 TXNRD1Q16881 649 aa26.76■■□□□ 1.87
C4orf48-202ENST00000409860 SLC27A3Q5K4L6 730 aa26.76■■□□□ 1.87
C4orf48-202ENST00000409860 CAMKK2Q96RR4 588 aa26.76■■□□□ 1.87
C4orf48-202ENST00000409860 ATP6V1AP38606 617 aa26.75■■□□□ 1.87
C4orf48-202ENST00000409860 SLFN5Q08AF3 891 aa26.75■■□□□ 1.87
C4orf48-202ENST00000409860 VSIG10Q8N0Z9 540 aa26.75■■□□□ 1.87
C4orf48-202ENST00000409860 CDCA7LQ96GN5 454 aa26.74■■□□□ 1.87
C4orf48-202ENST00000409860 RGPD3A6NKT7 1758 aaPredicted RBP26.74■■□□□ 1.87
C4orf48-202ENST00000409860 RGPD4Q7Z3J3 1758 aa26.74■■□□□ 1.87
C4orf48-202ENST00000409860 UBR2Q8IWV8 1755 aa26.74■■□□□ 1.87
C4orf48-202ENST00000409860 SNRPA1P09661 255 aaKnown RBP26.73■■□□□ 1.87
C4orf48-202ENST00000409860 HMGB2P26583 209 aaKnown RBP26.73■■□□□ 1.87
C4orf48-202ENST00000409860 EZH2Q15910 746 aaKnown RBP26.73■■□□□ 1.87
C4orf48-202ENST00000409860 SLC4A9Q96Q91 983 aa26.72■■□□□ 1.87
C4orf48-202ENST00000409860 LY75O60449 1722 aa26.71■■□□□ 1.87
C4orf48-202ENST00000409860 TEX13AQ9BXU3 409 aaPredicted RBP26.71■■□□□ 1.87
C4orf48-202ENST00000409860 PROM2Q8N271 834 aa26.7■■□□□ 1.86
C4orf48-202ENST00000409860 GIGYF1O75420 1035 aaPredicted RBP26.69■■□□□ 1.86
C4orf48-202ENST00000409860 KCNQ4P56696 695 aa26.69■■□□□ 1.86
C4orf48-202ENST00000409860 DNAJC10Q8IXB1 793 aa26.69■■□□□ 1.86
C4orf48-202ENST00000409860 ITPK1Q13572 414 aa26.68■■□□□ 1.86
C4orf48-202ENST00000409860 KRT24Q2M2I5 525 aa26.68■■□□□ 1.86
C4orf48-202ENST00000409860 LRRC4BQ9NT99 713 aa26.68■■□□□ 1.86
C4orf48-202ENST00000409860 HOXB7P09629 217 aa26.67■■□□□ 1.86
C4orf48-202ENST00000409860 DUSP27Q5VZP5 1158 aa26.67■■□□□ 1.86
C4orf48-202ENST00000409860 TRMT2AQ8IZ69 625 aaKnown RBP26.67■■□□□ 1.86
C4orf48-202ENST00000409860 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
C4orf48-202ENST00000409860 STARD3NLO95772 234 aa26.66■■□□□ 1.86
C4orf48-202ENST00000409860 EXOSC9Q06265 439 aaKnown RBP26.66■■□□□ 1.86
C4orf48-202ENST00000409860 SOS1Q07889 1333 aaPredicted RBP26.65■■□□□ 1.86
C4orf48-202ENST00000409860 C8orf58Q8NAV2 365 aa26.65■■□□□ 1.86
C4orf48-202ENST00000409860 LINC00116Q8NCU8 138 aa26.65■■□□□ 1.86
C4orf48-202ENST00000409860 PRAMEF22A3QJZ6 481 aa26.64■■□□□ 1.86
C4orf48-202ENST00000409860 SOCS7O14512 581 aa26.64■■□□□ 1.86
C4orf48-202ENST00000409860 CICQ96RK0 1608 aaPredicted RBP26.64■■□□□ 1.85
C4orf48-202ENST00000409860 ELL2O00472 640 aaPredicted RBP26.63■■□□□ 1.85
C4orf48-202ENST00000409860 TWISTNBQ3B726 338 aaPredicted RBP26.63■■□□□ 1.85
C4orf48-202ENST00000409860 TJP1Q07157 1748 aa26.62■■□□□ 1.85
C4orf48-202ENST00000409860 CYP19A1P11511 503 aaPredicted RBP26.62■■□□□ 1.85
C4orf48-202ENST00000409860 TSPYL6Q8N831 410 aa26.62■■□□□ 1.85
C4orf48-202ENST00000409860 CHMP4AQ9BY43 222 aa26.62■■□□□ 1.85
C4orf48-202ENST00000409860 USP16Q9Y5T5 823 aa26.62■■□□□ 1.85
C4orf48-202ENST00000409860 RREB1Q92766 1687 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms