RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 KDRP35968 1356 aa18.61■□□□□ 0.57
LYSMD4-204ENST00000409796 GNAI2P04899 355 aa18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 EYA1Q99502 592 aa18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 TRIM44Q96DX7 344 aaPredicted RBP18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 LMBRD1Q9NUN5 540 aa18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 RGPD8O14715 1765 aaPredicted RBP18.6■□□□□ 0.57
LYSMD4-204ENST00000409796 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
LYSMD4-204ENST00000409796 ADAMTSL3P82987 1691 aa18.59■□□□□ 0.57
LYSMD4-204ENST00000409796 IGSF1Q8N6C5 1336 aa18.58■□□□□ 0.57
LYSMD4-204ENST00000409796 STK31Q9BXU1 1019 aa18.58■□□□□ 0.57
LYSMD4-204ENST00000409796 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.56
LYSMD4-204ENST00000409796 FAM208AQ9UK61 1670 aaKnown RBP18.58■□□□□ 0.56
LYSMD4-204ENST00000409796 AMPHP49418 695 aa18.58■□□□□ 0.56
LYSMD4-204ENST00000409796 NASPP49321 788 aaPredicted RBP18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 ZDHHC9Q9Y397 364 aa18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 FLIIQ13045 1269 aa18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 CAVIN1Q6NZI2 390 aaKnown RBP18.57■□□□□ 0.56
LYSMD4-204ENST00000409796 LRRC37A3O60309 1634 aa18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 NECTIN2Q92692 538 aa18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 PNMA6EA0A0J9YXQ4 647 aa18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 FKBP5Q13451 457 aaPredicted RBP18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 NGDNQ8NEJ9 315 aaKnown RBP18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
LYSMD4-204ENST00000409796 ZNF445P59923 1031 aa18.55■□□□□ 0.56
LYSMD4-204ENST00000409796 CCDC173Q0VFZ6 552 aa18.55■□□□□ 0.56
LYSMD4-204ENST00000409796 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
LYSMD4-204ENST00000409796 PPP1R9BQ96SB3 815 aa18.55■□□□□ 0.56
LYSMD4-204ENST00000409796 ESYT1Q9BSJ8 1104 aa18.55■□□□□ 0.56
LYSMD4-204ENST00000409796 CACNA1FO60840 1977 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 GNAI3P08754 354 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 NEK4P51957 841 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 CCDC30Q5VVM6 783 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 PRPF40AO75400 957 aaKnown RBP18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 MX1P20591 662 aa18.54■□□□□ 0.56
LYSMD4-204ENST00000409796 HTATSF1O43719 755 aaKnown RBP18.53■□□□□ 0.56
LYSMD4-204ENST00000409796 CHAMP1Q96JM3 812 aa18.53■□□□□ 0.56
LYSMD4-204ENST00000409796 DIP2AQ14689 1571 aa18.52■□□□□ 0.56
LYSMD4-204ENST00000409796 GNAT3A8MTJ3 354 aa18.52■□□□□ 0.56
LYSMD4-204ENST00000409796 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
LYSMD4-204ENST00000409796 GPT2Q8TD30 523 aa18.52■□□□□ 0.55
LYSMD4-204ENST00000409796 PALD1Q9ULE6 856 aa18.52■□□□□ 0.55
LYSMD4-204ENST00000409796 RILPL2Q969X0 211 aa18.51■□□□□ 0.55
LYSMD4-204ENST00000409796 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
LYSMD4-204ENST00000409796 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
LYSMD4-204ENST00000409796 CHMLP26374 656 aa18.51■□□□□ 0.55
LYSMD4-204ENST00000409796 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
LYSMD4-204ENST00000409796 TRIM6-TRIM34B2RNG4 842 aa18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 NLRP6P59044 892 aa18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 RBM27Q9P2N5 1060 aaKnown RBP18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 FOXD4L5Q5VV16 416 aaPredicted RBP18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 IL17REQ8NFR9 667 aa18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 FOXD4L4Q8WXT5 416 aaPredicted RBP18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 ANP32BQ92688 251 aaKnown RBP18.5■□□□□ 0.55
LYSMD4-204ENST00000409796 NWD1Q149M9 1564 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 HOXC9P31274 260 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 RBSNQ9H1K0 784 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 ANO2Q9NQ90 1003 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 STAP2Q9UGK3 403 aa18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
LYSMD4-204ENST00000409796 MCCP23508 829 aa18.48■□□□□ 0.55
LYSMD4-204ENST00000409796 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
LYSMD4-204ENST00000409796 USP44Q9H0E7 712 aa18.48■□□□□ 0.55
LYSMD4-204ENST00000409796 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
LYSMD4-204ENST00000409796 MCM2P49736 904 aa18.47■□□□□ 0.55
LYSMD4-204ENST00000409796 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
LYSMD4-204ENST00000409796 CUL4AQ13619 759 aa18.47■□□□□ 0.55
LYSMD4-204ENST00000409796 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
LYSMD4-204ENST00000409796 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 SRCIN1Q9C0H9 1055 aa18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 NSFL1CQ9UNZ2 370 aaKnown RBP18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 ANAPC15P60006 121 aa18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 IL1RAPL2Q9NP60 686 aa18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 PXDNLA1KZ92 1463 aa18.46■□□□□ 0.55
LYSMD4-204ENST00000409796 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.54
LYSMD4-204ENST00000409796 TMEM63CQ9P1W3 806 aa18.46■□□□□ 0.54
LYSMD4-204ENST00000409796 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
LYSMD4-204ENST00000409796 BRD1O95696 1058 aa18.45■□□□□ 0.54
LYSMD4-204ENST00000409796 FBXO41Q8TF61 875 aa18.45■□□□□ 0.54
LYSMD4-204ENST00000409796 PHAXQ9H814 394 aaKnown RBP18.45■□□□□ 0.54
LYSMD4-204ENST00000409796 SLIT1O75093 1534 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 ZSCAN30Q86W11 494 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 IL25Q9H293 177 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 ARHGAP23Q9P227 1491 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
LYSMD4-204ENST00000409796 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
LYSMD4-204ENST00000409796 UPF3BQ9BZI7 483 aaKnown RBP18.43■□□□□ 0.54
LYSMD4-204ENST00000409796 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms