RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 KDM3BQ7LBC6 1761 aa21.79■■□□□ 1.08
SUMO1-208ENST00000409627 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
SUMO1-208ENST00000409627 EP400Q96L91 3159 aa21.78■■□□□ 1.08
SUMO1-208ENST00000409627 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
SUMO1-208ENST00000409627 NFATC2IPQ8NCF5 419 aa21.78■■□□□ 1.08
SUMO1-208ENST00000409627 PIGBQ92521 554 aa21.78■■□□□ 1.08
SUMO1-208ENST00000409627 PTF1AQ7RTS3 328 aa21.77■■□□□ 1.08
SUMO1-208ENST00000409627 UBR2Q8IWV8 1755 aa21.76■■□□□ 1.07
SUMO1-208ENST00000409627 LY75O60449 1722 aa21.76■■□□□ 1.07
SUMO1-208ENST00000409627 CALD1Q05682 793 aaKnown RBP21.76■■□□□ 1.07
SUMO1-208ENST00000409627 SALL2Q9Y467 1007 aaPredicted RBP21.76■■□□□ 1.07
SUMO1-208ENST00000409627 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
SUMO1-208ENST00000409627 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
SUMO1-208ENST00000409627 ZNF521Q96K83 1311 aa21.75■■□□□ 1.07
SUMO1-208ENST00000409627 CCDC125Q86Z20 511 aa21.73■■□□□ 1.07
SUMO1-208ENST00000409627 WDR63Q8IWG1 891 aa21.73■■□□□ 1.07
SUMO1-208ENST00000409627 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
SUMO1-208ENST00000409627 BABAM1Q9NWV8 329 aa21.72■■□□□ 1.07
SUMO1-208ENST00000409627 IL16Q14005 1332 aa21.72■■□□□ 1.07
SUMO1-208ENST00000409627 ZNF831Q5JPB2 1677 aa21.72■■□□□ 1.07
SUMO1-208ENST00000409627 SMARCC1Q92922 1105 aaPredicted RBP21.71■■□□□ 1.07
SUMO1-208ENST00000409627 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
SUMO1-208ENST00000409627 IFT57Q9NWB7 429 aa21.71■■□□□ 1.07
SUMO1-208ENST00000409627 KCPQ6ZWJ8 1503 aa21.7■■□□□ 1.07
SUMO1-208ENST00000409627 CICQ96RK0 1608 aaPredicted RBP21.7■■□□□ 1.06
SUMO1-208ENST00000409627 SF3B2Q13435 895 aaKnown RBP21.7■■□□□ 1.06
SUMO1-208ENST00000409627 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
SUMO1-208ENST00000409627 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
SUMO1-208ENST00000409627 PALLDQ8WX93 1383 aa21.7■■□□□ 1.06
SUMO1-208ENST00000409627 APBA3O96018 575 aa21.69■■□□□ 1.06
SUMO1-208ENST00000409627 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
SUMO1-208ENST00000409627 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
SUMO1-208ENST00000409627 CHL1O00533 1208 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 PLSCR1O15162 318 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 GNAI1P63096 354 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 SLC39A6Q13433 755 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 ZNF790Q6PG37 636 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
SUMO1-208ENST00000409627 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
SUMO1-208ENST00000409627 TSPYL4Q9UJ04 414 aa21.67■■□□□ 1.06
SUMO1-208ENST00000409627 RREB1Q92766 1687 aa21.66■■□□□ 1.06
SUMO1-208ENST00000409627 MIS18AQ9NYP9 233 aa21.66■■□□□ 1.06
SUMO1-208ENST00000409627 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
SUMO1-208ENST00000409627 BAG6P46379 1132 aa21.65■■□□□ 1.06
SUMO1-208ENST00000409627 GOLGA2Q08379 1002 aa21.65■■□□□ 1.06
SUMO1-208ENST00000409627 TJP1Q07157 1748 aa21.65■■□□□ 1.06
SUMO1-208ENST00000409627 TAF1LQ8IZX4 1826 aa21.64■■□□□ 1.06
SUMO1-208ENST00000409627 KCNQ3O43525 872 aa21.64■■□□□ 1.05
SUMO1-208ENST00000409627 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
SUMO1-208ENST00000409627 LAMB4A4D0S4 1761 aa21.63■■□□□ 1.05
SUMO1-208ENST00000409627 COL5A3P25940 1745 aaPredicted RBP21.63■■□□□ 1.05
SUMO1-208ENST00000409627 C5P01031 1676 aa21.63■■□□□ 1.05
SUMO1-208ENST00000409627 LOC102724428A0A0B4J2F2 783 aa21.62■■□□□ 1.05
SUMO1-208ENST00000409627 SIK1P57059 783 aa21.62■■□□□ 1.05
SUMO1-208ENST00000409627 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
SUMO1-208ENST00000409627 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
SUMO1-208ENST00000409627 E9PSI1 815 aa21.61■■□□□ 1.05
SUMO1-208ENST00000409627 PTCD1O75127 700 aaKnown RBP21.61■■□□□ 1.05
SUMO1-208ENST00000409627 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
SUMO1-208ENST00000409627 SLC27A3Q5K4L6 730 aa21.61■■□□□ 1.05
SUMO1-208ENST00000409627 ZNF496Q96IT1 587 aaPredicted RBP21.61■■□□□ 1.05
SUMO1-208ENST00000409627 CAMKK2Q96RR4 588 aa21.61■■□□□ 1.05
SUMO1-208ENST00000409627 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
SUMO1-208ENST00000409627 MYH16Q9H6N6 1097 aa21.61■■□□□ 1.05
SUMO1-208ENST00000409627 HEG1Q9ULI3 1381 aa21.61■■□□□ 1.05
SUMO1-208ENST00000409627 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
SUMO1-208ENST00000409627 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
SUMO1-208ENST00000409627 EN1Q05925 392 aaPredicted RBP21.6■■□□□ 1.05
SUMO1-208ENST00000409627 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
SUMO1-208ENST00000409627 DEFB132Q7Z7B7 95 aa21.6■■□□□ 1.05
SUMO1-208ENST00000409627 VSIG10Q8N0Z9 540 aa21.6■■□□□ 1.05
SUMO1-208ENST00000409627 TXNRD1Q16881 649 aa21.59■■□□□ 1.05
SUMO1-208ENST00000409627 TSR2Q969E8 191 aaKnown RBP21.59■■□□□ 1.05
SUMO1-208ENST00000409627 SLC4A9Q96Q91 983 aa21.59■■□□□ 1.05
SUMO1-208ENST00000409627 CCNL1Q9UK58 526 aaPredicted RBP21.59■■□□□ 1.05
SUMO1-208ENST00000409627 EZH2Q15910 746 aaKnown RBP21.58■■□□□ 1.05
SUMO1-208ENST00000409627 PROM2Q8N271 834 aa21.58■■□□□ 1.05
SUMO1-208ENST00000409627 ATP6V1AP38606 617 aa21.57■■□□□ 1.04
SUMO1-208ENST00000409627 CDCA7LQ96GN5 454 aa21.57■■□□□ 1.04
SUMO1-208ENST00000409627 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
SUMO1-208ENST00000409627 TRMT2AQ8IZ69 625 aaKnown RBP21.56■■□□□ 1.04
SUMO1-208ENST00000409627 C4BP0C0L5 1744 aa21.55■■□□□ 1.04
SUMO1-208ENST00000409627 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
SUMO1-208ENST00000409627 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
SUMO1-208ENST00000409627 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
SUMO1-208ENST00000409627 LRRC4BQ9NT99 713 aa21.55■■□□□ 1.04
SUMO1-208ENST00000409627 GIGYF1O75420 1035 aaPredicted RBP21.54■■□□□ 1.04
SUMO1-208ENST00000409627 ITPK1Q13572 414 aa21.54■■□□□ 1.04
SUMO1-208ENST00000409627 HOXB7P09629 217 aa21.53■■□□□ 1.04
SUMO1-208ENST00000409627 DNAJC10Q8IXB1 793 aa21.53■■□□□ 1.04
SUMO1-208ENST00000409627 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
SUMO1-208ENST00000409627 KCNQ4P56696 695 aa21.52■■□□□ 1.04
SUMO1-208ENST00000409627 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
SUMO1-208ENST00000409627 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.04
SUMO1-208ENST00000409627 MYH14Q7Z406 1995 aaKnown RBP21.51■■□□□ 1.03
SUMO1-208ENST00000409627 PRAMEF22A3QJZ6 481 aa21.51■■□□□ 1.03
SUMO1-208ENST00000409627 SOCS7O14512 581 aa21.51■■□□□ 1.03
SUMO1-208ENST00000409627 C8orf58Q8NAV2 365 aa21.51■■□□□ 1.03
SUMO1-208ENST00000409627 LINC00116Q8NCU8 138 aa21.51■■□□□ 1.03
SUMO1-208ENST00000409627 EXOSC9Q06265 439 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms