RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
CHRNA1-204ENST00000409323 KCNQ3O43525 872 aa18.43■□□□□ 0.54
CHRNA1-204ENST00000409323 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
CHRNA1-204ENST00000409323 ERVV-2B6SEH9 535 aa18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 TSR2Q969E8 191 aaKnown RBP18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 MRC1P22897 1456 aa18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 NHSQ6T4R5 1651 aa18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 ILDR2Q71H61 639 aa18.42■□□□□ 0.54
CHRNA1-204ENST00000409323 BTAF1O14981 1849 aa18.41■□□□□ 0.54
CHRNA1-204ENST00000409323 BTBD11A6QL63 1104 aa18.41■□□□□ 0.54
CHRNA1-204ENST00000409323 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CHRNA1-204ENST00000409323 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
CHRNA1-204ENST00000409323 TSPYL4Q9UJ04 414 aa18.4■□□□□ 0.54
CHRNA1-204ENST00000409323 BCL9O00512 1426 aa18.4■□□□□ 0.54
CHRNA1-204ENST00000409323 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
CHRNA1-204ENST00000409323 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
CHRNA1-204ENST00000409323 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
CHRNA1-204ENST00000409323 MBIPQ9NS73 344 aa18.39■□□□□ 0.53
CHRNA1-204ENST00000409323 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
CHRNA1-204ENST00000409323 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
CHRNA1-204ENST00000409323 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 ZNF853P0CG23 659 aa18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 CFAP44Q96MT7 982 aa18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
CHRNA1-204ENST00000409323 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
CHRNA1-204ENST00000409323 CHL1O00533 1208 aa18.36■□□□□ 0.53
CHRNA1-204ENST00000409323 KCNQ4P56696 695 aa18.36■□□□□ 0.53
CHRNA1-204ENST00000409323 GNAI1P63096 354 aa18.36■□□□□ 0.53
CHRNA1-204ENST00000409323 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
CHRNA1-204ENST00000409323 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
CHRNA1-204ENST00000409323 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
CHRNA1-204ENST00000409323 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
CHRNA1-204ENST00000409323 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
CHRNA1-204ENST00000409323 ELL2O00472 640 aaPredicted RBP18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 TTC5Q8N0Z6 440 aa18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 RBM42Q9BTD8 480 aaKnown RBP18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 TNS1Q9HBL0 1735 aaKnown RBP18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 IL16Q14005 1332 aa18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 ZNF496Q96IT1 587 aaPredicted RBP18.34■□□□□ 0.53
CHRNA1-204ENST00000409323 E9PSI1 815 aa18.33■□□□□ 0.52
CHRNA1-204ENST00000409323 APBA3O96018 575 aa18.33■□□□□ 0.52
CHRNA1-204ENST00000409323 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
CHRNA1-204ENST00000409323 KCPQ6ZWJ8 1503 aa18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 DUSP27Q5VZP5 1158 aa18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
CHRNA1-204ENST00000409323 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
CHRNA1-204ENST00000409323 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
CHRNA1-204ENST00000409323 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
CHRNA1-204ENST00000409323 C5P01031 1676 aa18.3■□□□□ 0.52
CHRNA1-204ENST00000409323 DEFB132Q7Z7B7 95 aa18.29■□□□□ 0.52
CHRNA1-204ENST00000409323 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
CHRNA1-204ENST00000409323 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
CHRNA1-204ENST00000409323 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
CHRNA1-204ENST00000409323 TCERG1O14776 1098 aaKnown RBP18.27■□□□□ 0.52
CHRNA1-204ENST00000409323 SIK1P57059 783 aa18.27■□□□□ 0.52
CHRNA1-204ENST00000409323 EN1Q05925 392 aaPredicted RBP18.27■□□□□ 0.52
CHRNA1-204ENST00000409323 LY75O60449 1722 aa18.27■□□□□ 0.51
CHRNA1-204ENST00000409323 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
CHRNA1-204ENST00000409323 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
CHRNA1-204ENST00000409323 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
CHRNA1-204ENST00000409323 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
CHRNA1-204ENST00000409323 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
CHRNA1-204ENST00000409323 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 PIP4K2AP48426 406 aaPredicted RBP18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 ITPK1Q13572 414 aa18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 TJP1Q07157 1748 aa18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 GIGYF1O75420 1035 aaPredicted RBP18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
CHRNA1-204ENST00000409323 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
CHRNA1-204ENST00000409323 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
CHRNA1-204ENST00000409323 PROM2Q8N271 834 aa18.24■□□□□ 0.51
CHRNA1-204ENST00000409323 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHRNA1-204ENST00000409323 LRRC4BQ9NT99 713 aa18.24■□□□□ 0.51
CHRNA1-204ENST00000409323 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
CHRNA1-204ENST00000409323 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
CHRNA1-204ENST00000409323 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 VAMP4O75379 141 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 ANXA1P04083 346 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 BAG6P46379 1132 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
CHRNA1-204ENST00000409323 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.5
CHRNA1-204ENST00000409323 LAMB4A4D0S4 1761 aa18.2■□□□□ 0.5
CHRNA1-204ENST00000409323 PLSCR1O15162 318 aa18.2■□□□□ 0.5
CHRNA1-204ENST00000409323 A1BGP04217 495 aa18.2■□□□□ 0.5
CHRNA1-204ENST00000409323 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
CHRNA1-204ENST00000409323 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
CHRNA1-204ENST00000409323 CAMKK2Q96RR4 588 aa18.19■□□□□ 0.5
CHRNA1-204ENST00000409323 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
CHRNA1-204ENST00000409323 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms