RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 AKT1S1Q96B36 256 aa19.07■□□□□ 0.64
COPS7B-205ENST00000409295 MAP3K5Q99683 1374 aa19.06■□□□□ 0.64
COPS7B-205ENST00000409295 MAPK8IP3Q9UPT6 1336 aa19.06■□□□□ 0.64
COPS7B-205ENST00000409295 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
COPS7B-205ENST00000409295 SPON1Q9HCB6 807 aa19.06■□□□□ 0.64
COPS7B-205ENST00000409295 MSH5O43196 834 aa19.04■□□□□ 0.64
COPS7B-205ENST00000409295 HTATSF1O43719 755 aaKnown RBP19.04■□□□□ 0.64
COPS7B-205ENST00000409295 PTCD1O75127 700 aaKnown RBP19.04■□□□□ 0.64
COPS7B-205ENST00000409295 FLAD1Q8NFF5 587 aa19.04■□□□□ 0.64
COPS7B-205ENST00000409295 IL17REQ8NFR9 667 aa19.04■□□□□ 0.64
COPS7B-205ENST00000409295 AK7Q96M32 723 aa19.04■□□□□ 0.64
COPS7B-205ENST00000409295 TOGARAM1Q9Y4F4 1720 aa19.03■□□□□ 0.64
COPS7B-205ENST00000409295 ITGB4P16144 1822 aa19.02■□□□□ 0.64
COPS7B-205ENST00000409295 TTC5Q8N0Z6 440 aa19.02■□□□□ 0.64
COPS7B-205ENST00000409295 SLC16A10Q8TF71 515 aa19.02■□□□□ 0.64
COPS7B-205ENST00000409295 ZBTB7AO95365 584 aa19.01■□□□□ 0.63
COPS7B-205ENST00000409295 PLEKHF1Q96S99 279 aa19.01■□□□□ 0.63
COPS7B-205ENST00000409295 PPP1R1BQ9UD71 204 aaPredicted RBP19.01■□□□□ 0.63
COPS7B-205ENST00000409295 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
COPS7B-205ENST00000409295 SLC39A6Q13433 755 aa19■□□□□ 0.63
COPS7B-205ENST00000409295 NFE2L2Q16236 605 aa19■□□□□ 0.63
COPS7B-205ENST00000409295 PDGFDQ9GZP0 370 aaPredicted RBP19■□□□□ 0.63
COPS7B-205ENST00000409295 MTFR1LQ9H019 292 aa19■□□□□ 0.63
COPS7B-205ENST00000409295 ITPK1Q13572 414 aa18.99■□□□□ 0.63
COPS7B-205ENST00000409295 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
COPS7B-205ENST00000409295 LY75O60449 1722 aa18.99■□□□□ 0.63
COPS7B-205ENST00000409295 MCM10Q7L590 875 aa18.98■□□□□ 0.63
COPS7B-205ENST00000409295 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
COPS7B-205ENST00000409295 PNPLA7Q6ZV29 1317 aa18.98■□□□□ 0.63
COPS7B-205ENST00000409295 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
COPS7B-205ENST00000409295 RC3H1Q5TC82 1133 aaKnown RBP18.97■□□□□ 0.63
COPS7B-205ENST00000409295 GNPATO15228 680 aa18.96■□□□□ 0.63
COPS7B-205ENST00000409295 COL23A1Q86Y22 540 aaPredicted RBP18.96■□□□□ 0.63
COPS7B-205ENST00000409295 RUNDC1Q96C34 613 aa18.96■□□□□ 0.63
COPS7B-205ENST00000409295 SLC4A9Q96Q91 983 aa18.96■□□□□ 0.63
COPS7B-205ENST00000409295 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
COPS7B-205ENST00000409295 PHF14O94880 888 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 SSFA2P28290 1259 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 RIPK4P57078 832 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
COPS7B-205ENST00000409295 ZNF790Q6PG37 636 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
COPS7B-205ENST00000409295 CEMIPQ8WUJ3 1361 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 SCN11AQ9UI33 1791 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 PAPPAQ13219 1627 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 POLD1P28340 1107 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 TRAPPC3LQ5T215 181 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 CCDC146Q8IYE0 955 aa18.94■□□□□ 0.62
COPS7B-205ENST00000409295 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
COPS7B-205ENST00000409295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.93■□□□□ 0.62
COPS7B-205ENST00000409295 STARD3NLO95772 234 aa18.93■□□□□ 0.62
COPS7B-205ENST00000409295 PNISRQ8TF01 805 aaKnown RBP18.93■□□□□ 0.62
COPS7B-205ENST00000409295 FMNL2Q96PY5 1086 aa18.93■□□□□ 0.62
COPS7B-205ENST00000409295 MRC1P22897 1456 aa18.92■□□□□ 0.62
COPS7B-205ENST00000409295 RPS6KA4O75676 772 aa18.92■□□□□ 0.62
COPS7B-205ENST00000409295 TMPOP42166 694 aaKnown RBP18.92■□□□□ 0.62
COPS7B-205ENST00000409295 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
COPS7B-205ENST00000409295 CNTNAP4Q9C0A0 1308 aa18.92■□□□□ 0.62
COPS7B-205ENST00000409295 ADRA2BP18089 450 aa18.91■□□□□ 0.62
COPS7B-205ENST00000409295 CRKLP46109 303 aaKnown RBP18.91■□□□□ 0.62
COPS7B-205ENST00000409295 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
COPS7B-205ENST00000409295 MRS2Q9HD23 443 aa18.91■□□□□ 0.62
COPS7B-205ENST00000409295 ZNF496Q96IT1 587 aaPredicted RBP18.9■□□□□ 0.62
COPS7B-205ENST00000409295 RFC4P35249 363 aa18.89■□□□□ 0.61
COPS7B-205ENST00000409295 PTGER2P43116 358 aa18.89■□□□□ 0.61
COPS7B-205ENST00000409295 ARXQ96QS3 562 aa18.89■□□□□ 0.61
COPS7B-205ENST00000409295 CCDC87Q9NVE4 849 aa18.89■□□□□ 0.61
COPS7B-205ENST00000409295 C5P01031 1676 aa18.89■□□□□ 0.61
COPS7B-205ENST00000409295 CYP19A1P11511 503 aaPredicted RBP18.88■□□□□ 0.61
COPS7B-205ENST00000409295 SMIM5Q71RC9 77 aa18.88■□□□□ 0.61
COPS7B-205ENST00000409295 RRP7AQ9Y3A4 280 aaKnown RBP18.88■□□□□ 0.61
COPS7B-205ENST00000409295 LRP5O75197 1615 aa18.88■□□□□ 0.61
COPS7B-205ENST00000409295 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
COPS7B-205ENST00000409295 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
COPS7B-205ENST00000409295 KCNQ3O43525 872 aa18.87■□□□□ 0.61
COPS7B-205ENST00000409295 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
COPS7B-205ENST00000409295 ARHGEF1Q92888 912 aaKnown RBP18.87■□□□□ 0.61
COPS7B-205ENST00000409295 CASZ1Q86V15 1759 aa18.86■□□□□ 0.61
COPS7B-205ENST00000409295 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
COPS7B-205ENST00000409295 SNRPA1P09661 255 aaKnown RBP18.86■□□□□ 0.61
COPS7B-205ENST00000409295 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
COPS7B-205ENST00000409295 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
COPS7B-205ENST00000409295 INTS5Q6P9B9 1019 aaKnown RBP18.86■□□□□ 0.61
COPS7B-205ENST00000409295 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
COPS7B-205ENST00000409295 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
COPS7B-205ENST00000409295 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
COPS7B-205ENST00000409295 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
COPS7B-205ENST00000409295 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
COPS7B-205ENST00000409295 TAF1LQ8IZX4 1826 aa18.84■□□□□ 0.61
COPS7B-205ENST00000409295 APAF1O14727 1248 aa18.84■□□□□ 0.61
COPS7B-205ENST00000409295 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
COPS7B-205ENST00000409295 NLGN1Q8N2Q7 840 aa18.84■□□□□ 0.61
COPS7B-205ENST00000409295 ZNF831Q5JPB2 1677 aa18.84■□□□□ 0.61
COPS7B-205ENST00000409295 ZPR1O75312 459 aa18.83■□□□□ 0.6
COPS7B-205ENST00000409295 BABAM1Q9NWV8 329 aa18.83■□□□□ 0.6
COPS7B-205ENST00000409295 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
COPS7B-205ENST00000409295 QSER1Q2KHR3 1735 aa18.83■□□□□ 0.6
COPS7B-205ENST00000409295 A0A087WZG4 1122 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 300.5 ms