RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 TEFQ10587 303 aa17.02■□□□□ 0.32
LIMS2-203ENST00000409254 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
LIMS2-203ENST00000409254 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.32
LIMS2-203ENST00000409254 GNAI1P63096 354 aa17.01■□□□□ 0.31
LIMS2-203ENST00000409254 NEUROD2Q15784 382 aa17.01■□□□□ 0.31
LIMS2-203ENST00000409254 E9PSI1 815 aa17■□□□□ 0.31
LIMS2-203ENST00000409254 GOLGA2Q08379 1002 aa17■□□□□ 0.31
LIMS2-203ENST00000409254 MPRIPQ6WCQ1 1025 aa17■□□□□ 0.31
LIMS2-203ENST00000409254 CFAP44Q96MT7 982 aa17■□□□□ 0.31
LIMS2-203ENST00000409254 SOS1Q07889 1333 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-203ENST00000409254 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
LIMS2-203ENST00000409254 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
LIMS2-203ENST00000409254 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
LIMS2-203ENST00000409254 MCM10Q7L590 875 aa16.99■□□□□ 0.31
LIMS2-203ENST00000409254 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
LIMS2-203ENST00000409254 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
LIMS2-203ENST00000409254 CHL1O00533 1208 aa16.97■□□□□ 0.31
LIMS2-203ENST00000409254 CABP4P57796 275 aa16.97■□□□□ 0.31
LIMS2-203ENST00000409254 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
LIMS2-203ENST00000409254 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
LIMS2-203ENST00000409254 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
LIMS2-203ENST00000409254 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
LIMS2-203ENST00000409254 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
LIMS2-203ENST00000409254 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
LIMS2-203ENST00000409254 BCL11BQ9C0K0 894 aaPredicted RBP16.95■□□□□ 0.3
LIMS2-203ENST00000409254 C5P01031 1676 aa16.94■□□□□ 0.3
LIMS2-203ENST00000409254 TJP1Q07157 1748 aa16.94■□□□□ 0.3
LIMS2-203ENST00000409254 SLFN5Q08AF3 891 aa16.94■□□□□ 0.3
LIMS2-203ENST00000409254 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
LIMS2-203ENST00000409254 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
LIMS2-203ENST00000409254 HEG1Q9ULI3 1381 aa16.93■□□□□ 0.3
LIMS2-203ENST00000409254 HOXB7P09629 217 aa16.93■□□□□ 0.3
LIMS2-203ENST00000409254 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
LIMS2-203ENST00000409254 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
LIMS2-203ENST00000409254 RREB1Q92766 1687 aa16.93■□□□□ 0.3
LIMS2-203ENST00000409254 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
LIMS2-203ENST00000409254 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
LIMS2-203ENST00000409254 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
LIMS2-203ENST00000409254 PIGBQ92521 554 aa16.92■□□□□ 0.3
LIMS2-203ENST00000409254 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
LIMS2-203ENST00000409254 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
LIMS2-203ENST00000409254 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
LIMS2-203ENST00000409254 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
LIMS2-203ENST00000409254 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
LIMS2-203ENST00000409254 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
LIMS2-203ENST00000409254 DUSP27Q5VZP5 1158 aa16.9■□□□□ 0.3
LIMS2-203ENST00000409254 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
LIMS2-203ENST00000409254 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
LIMS2-203ENST00000409254 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
LIMS2-203ENST00000409254 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
LIMS2-203ENST00000409254 FMNL2Q96PY5 1086 aa16.88■□□□□ 0.29
LIMS2-203ENST00000409254 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
LIMS2-203ENST00000409254 PLSCR1O15162 318 aa16.87■□□□□ 0.29
LIMS2-203ENST00000409254 SYTL4Q96C24 671 aaPredicted RBP16.87■□□□□ 0.29
LIMS2-203ENST00000409254 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
LIMS2-203ENST00000409254 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
LIMS2-203ENST00000409254 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
LIMS2-203ENST00000409254 EIF4A1P60842 406 aaKnown RBP16.86■□□□□ 0.29
LIMS2-203ENST00000409254 YTHDC1Q96MU7 727 aaKnown RBP16.86■□□□□ 0.29
LIMS2-203ENST00000409254 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
LIMS2-203ENST00000409254 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
LIMS2-203ENST00000409254 KCNQ2O43526 872 aa16.85■□□□□ 0.29
LIMS2-203ENST00000409254 ERBB4Q15303 1308 aa16.85■□□□□ 0.29
LIMS2-203ENST00000409254 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 FAM182BQ5T319 152 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 LAS1LQ9Y4W2 734 aaKnown RBP16.84■□□□□ 0.29
LIMS2-203ENST00000409254 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 UBR3Q6ZT12 1888 aa16.84■□□□□ 0.29
LIMS2-203ENST00000409254 TRIM37O94972 964 aa16.83■□□□□ 0.28
LIMS2-203ENST00000409254 SNRPA1P09661 255 aaKnown RBP16.83■□□□□ 0.28
LIMS2-203ENST00000409254 C4BP0C0L5 1744 aa16.83■□□□□ 0.28
LIMS2-203ENST00000409254 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-203ENST00000409254 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
LIMS2-203ENST00000409254 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
LIMS2-203ENST00000409254 LOC102724428A0A0B4J2F2 783 aa16.82■□□□□ 0.28
LIMS2-203ENST00000409254 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
LIMS2-203ENST00000409254 SIK1P57059 783 aa16.82■□□□□ 0.28
LIMS2-203ENST00000409254 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
LIMS2-203ENST00000409254 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
LIMS2-203ENST00000409254 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
LIMS2-203ENST00000409254 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-203ENST00000409254 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
LIMS2-203ENST00000409254 EXOSC9Q06265 439 aaKnown RBP16.79■□□□□ 0.28
LIMS2-203ENST00000409254 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
LIMS2-203ENST00000409254 MIS18AQ9NYP9 233 aa16.79■□□□□ 0.28
LIMS2-203ENST00000409254 CNTNAP4Q9C0A0 1308 aa16.78■□□□□ 0.28
LIMS2-203ENST00000409254 KCNQ3O43525 872 aa16.78■□□□□ 0.28
LIMS2-203ENST00000409254 STARD3NLO95772 234 aa16.78■□□□□ 0.28
LIMS2-203ENST00000409254 BAG6P46379 1132 aa16.78■□□□□ 0.28
LIMS2-203ENST00000409254 BRPF1P55201 1214 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-203ENST00000409254 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
LIMS2-203ENST00000409254 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
LIMS2-203ENST00000409254 PTCD1O75127 700 aaKnown RBP16.77■□□□□ 0.28
LIMS2-203ENST00000409254 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
LIMS2-203ENST00000409254 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
LIMS2-203ENST00000409254 VAMP4O75379 141 aa16.76■□□□□ 0.27
LIMS2-203ENST00000409254 APBA3O96018 575 aa16.76■□□□□ 0.27
LIMS2-203ENST00000409254 RC3H1Q5TC82 1133 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms