RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 MIER1Q8N108 512 aa27.57■■■□□ 2
C4orf48-201ENST00000409248 PHACTR3Q96KR7 559 aa27.57■■■□□ 2
C4orf48-201ENST00000409248 PNNQ9H307 717 aaKnown RBP27.57■■■□□ 2
C4orf48-201ENST00000409248 ASAP1Q9ULH1 1129 aa27.57■■■□□ 2
C4orf48-201ENST00000409248 ZNF831Q5JPB2 1677 aa27.56■■■□□ 2
C4orf48-201ENST00000409248 ATG3Q9NT62 314 aa27.56■■■□□ 2
C4orf48-201ENST00000409248 CCER2I3L3R5 266 aa27.55■■■□□ 2
C4orf48-201ENST00000409248 KCNQ4P56696 695 aa27.55■■■□□ 2
C4orf48-201ENST00000409248 CCDC184Q52MB2 194 aa27.55■■■□□ 2
C4orf48-201ENST00000409248 SLC52A2Q9HAB3 445 aa27.55■■■□□ 2
C4orf48-201ENST00000409248 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 SIK1P57059 783 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 ZNF827Q17R98 1081 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 NFATC2IPQ8NCF5 419 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 TUBGCP6Q96RT7 1819 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 LGR6Q9HBX8 967 aa27.54■■■□□ 2
C4orf48-201ENST00000409248 C4BP0C0L5 1744 aa27.53■■■□□ 2
C4orf48-201ENST00000409248 WDR43Q15061 677 aaKnown RBP eCLIP27.53■■■□□ 2
C4orf48-201ENST00000409248 AKT1S1Q96B36 256 aa27.53■■■□□ 2
C4orf48-201ENST00000409248 MAPK8IP3Q9UPT6 1336 aa27.52■■■□□ 2
C4orf48-201ENST00000409248 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
C4orf48-201ENST00000409248 CICQ96RK0 1608 aaPredicted RBP27.49■■□□□ 1.99
C4orf48-201ENST00000409248 TEFQ10587 303 aa27.49■■□□□ 1.99
C4orf48-201ENST00000409248 TFCP2L1Q9NZI6 479 aa27.49■■□□□ 1.99
C4orf48-201ENST00000409248 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
C4orf48-201ENST00000409248 DLG5Q8TDM6 1919 aa27.48■■□□□ 1.99
C4orf48-201ENST00000409248 ATP6V1AP38606 617 aa27.48■■□□□ 1.99
C4orf48-201ENST00000409248 RTF1Q92541 710 aaKnown RBP27.48■■□□□ 1.99
C4orf48-201ENST00000409248 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
C4orf48-201ENST00000409248 RBM42Q9BTD8 480 aaKnown RBP27.47■■□□□ 1.99
C4orf48-201ENST00000409248 COL5A3P25940 1745 aaPredicted RBP27.47■■□□□ 1.99
C4orf48-201ENST00000409248 IL17REQ8NFR9 667 aa27.46■■□□□ 1.99
C4orf48-201ENST00000409248 UBR2Q8IWV8 1755 aa27.45■■□□□ 1.99
C4orf48-201ENST00000409248 HTATSF1O43719 755 aaKnown RBP27.45■■□□□ 1.98
C4orf48-201ENST00000409248 AK7Q96M32 723 aa27.45■■□□□ 1.98
C4orf48-201ENST00000409248 PNISRQ8TF01 805 aaKnown RBP27.44■■□□□ 1.98
C4orf48-201ENST00000409248 UBR3Q6ZT12 1888 aa27.43■■□□□ 1.98
C4orf48-201ENST00000409248 PTCD1O75127 700 aaKnown RBP27.43■■□□□ 1.98
C4orf48-201ENST00000409248 ITPK1Q13572 414 aa27.43■■□□□ 1.98
C4orf48-201ENST00000409248 NFE2L2Q16236 605 aa27.43■■□□□ 1.98
C4orf48-201ENST00000409248 SPON1Q9HCB6 807 aa27.43■■□□□ 1.98
C4orf48-201ENST00000409248 TJP1Q07157 1748 aa27.43■■□□□ 1.98
C4orf48-201ENST00000409248 PNPLA7Q6ZV29 1317 aa27.42■■□□□ 1.98
C4orf48-201ENST00000409248 KCPQ6ZWJ8 1503 aa27.42■■□□□ 1.98
C4orf48-201ENST00000409248 LINC00116Q8NCU8 138 aa27.42■■□□□ 1.98
C4orf48-201ENST00000409248 PDGFDQ9GZP0 370 aaPredicted RBP27.42■■□□□ 1.98
C4orf48-201ENST00000409248 ADAMTS8Q9UP79 889 aa27.41■■□□□ 1.98
C4orf48-201ENST00000409248 TTC5Q8N0Z6 440 aa27.4■■□□□ 1.98
C4orf48-201ENST00000409248 MTFR1LQ9H019 292 aa27.4■■□□□ 1.98
C4orf48-201ENST00000409248 ZBTB7AO95365 584 aa27.39■■□□□ 1.98
C4orf48-201ENST00000409248 SLC39A6Q13433 755 aa27.39■■□□□ 1.98
C4orf48-201ENST00000409248 MCM10Q7L590 875 aa27.39■■□□□ 1.98
C4orf48-201ENST00000409248 FLAD1Q8NFF5 587 aa27.39■■□□□ 1.98
C4orf48-201ENST00000409248 SLC4A9Q96Q91 983 aa27.39■■□□□ 1.98
C4orf48-201ENST00000409248 SLC16A10Q8TF71 515 aa27.38■■□□□ 1.97
C4orf48-201ENST00000409248 CNTNAP4Q9C0A0 1308 aa27.37■■□□□ 1.97
C4orf48-201ENST00000409248 FAM9BQ8IZU0 186 aa27.36■■□□□ 1.97
C4orf48-201ENST00000409248 RUNDC1Q96C34 613 aa27.36■■□□□ 1.97
C4orf48-201ENST00000409248 GNPATO15228 680 aa27.35■■□□□ 1.97
C4orf48-201ENST00000409248 SSFA2P28290 1259 aa27.35■■□□□ 1.97
C4orf48-201ENST00000409248 BTBD11A6QL63 1104 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 MSH5O43196 834 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 LMOD3Q0VAK6 560 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 DCTN1Q14203 1278 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 ZNF790Q6PG37 636 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 CCDC146Q8IYE0 955 aa27.34■■□□□ 1.97
C4orf48-201ENST00000409248 RC3H1Q5TC82 1133 aaKnown RBP27.33■■□□□ 1.97
C4orf48-201ENST00000409248 VSIG10Q8N0Z9 540 aa27.33■■□□□ 1.97
C4orf48-201ENST00000409248 COL24A1Q17RW2 1714 aa27.33■■□□□ 1.96
C4orf48-201ENST00000409248 COL23A1Q86Y22 540 aaPredicted RBP27.32■■□□□ 1.96
C4orf48-201ENST00000409248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.31■■□□□ 1.96
C4orf48-201ENST00000409248 PHF14O94880 888 aa27.31■■□□□ 1.96
C4orf48-201ENST00000409248 TMPOP42166 694 aaKnown RBP27.31■■□□□ 1.96
C4orf48-201ENST00000409248 PPP1R1BQ9UD71 204 aaPredicted RBP27.31■■□□□ 1.96
C4orf48-201ENST00000409248 ATF5Q9Y2D1 282 aaPredicted RBP27.31■■□□□ 1.96
C4orf48-201ENST00000409248 MYH14Q7Z406 1995 aaKnown RBP27.31■■□□□ 1.96
C4orf48-201ENST00000409248 SRCAPQ6ZRS2 3230 aa27.3■■□□□ 1.96
C4orf48-201ENST00000409248 RIPK4P57078 832 aa27.3■■□□□ 1.96
C4orf48-201ENST00000409248 RTCBQ9Y3I0 505 aaKnown RBP27.3■■□□□ 1.96
C4orf48-201ENST00000409248 CRKLP46109 303 aaKnown RBP27.29■■□□□ 1.96
C4orf48-201ENST00000409248 DNAJC10Q8IXB1 793 aa27.29■■□□□ 1.96
C4orf48-201ENST00000409248 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
C4orf48-201ENST00000409248 HEG1Q9ULI3 1381 aa27.29■■□□□ 1.96
C4orf48-201ENST00000409248 KDM3BQ7LBC6 1761 aa27.29■■□□□ 1.96
C4orf48-201ENST00000409248 ADRA2BP18089 450 aa27.28■■□□□ 1.96
C4orf48-201ENST00000409248 TAF7Q15545 349 aaPredicted RBP27.28■■□□□ 1.96
C4orf48-201ENST00000409248 ZNF496Q96IT1 587 aaPredicted RBP27.28■■□□□ 1.96
C4orf48-201ENST00000409248 PTGER2P43116 358 aa27.27■■□□□ 1.96
C4orf48-201ENST00000409248 AMIGO3Q86WK7 504 aa27.27■■□□□ 1.96
C4orf48-201ENST00000409248 C4AP0C0L4 1744 aa27.27■■□□□ 1.96
C4orf48-201ENST00000409248 RPS6KA4O75676 772 aa27.25■■□□□ 1.95
C4orf48-201ENST00000409248 POLD1P28340 1107 aa27.25■■□□□ 1.95
C4orf48-201ENST00000409248 TEX13AQ9BXU3 409 aaPredicted RBP27.25■■□□□ 1.95
C4orf48-201ENST00000409248 CCDC87Q9NVE4 849 aa27.25■■□□□ 1.95
C4orf48-201ENST00000409248 RRP7AQ9Y3A4 280 aaKnown RBP27.25■■□□□ 1.95
C4orf48-201ENST00000409248 STARD3NLO95772 234 aa27.24■■□□□ 1.95
C4orf48-201ENST00000409248 CYP19A1P11511 503 aaPredicted RBP27.24■■□□□ 1.95
C4orf48-201ENST00000409248 SGIP1Q9BQI5 828 aa27.24■■□□□ 1.95
C4orf48-201ENST00000409248 THUMPD2Q9BTF0 503 aaKnown RBP27.24■■□□□ 1.95
C4orf48-201ENST00000409248 NEUROD2Q15784 382 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms