RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
SMPD4-202ENST00000409031 ABCC5O15440 1437 aa20.68■□□□□ 0.9
SMPD4-202ENST00000409031 SKILP12757 684 aa20.68■□□□□ 0.9
SMPD4-202ENST00000409031 KIF1BPQ96EK5 621 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 IL16Q14005 1332 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 RAB11FIP3O75154 756 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 ANAPC15P60006 121 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 TTC5Q8N0Z6 440 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 PIBF1Q8WXW3 757 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 PPP1R9BQ96SB3 815 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 ARFGAP3Q9NP61 516 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 ATP2B1P20020 1258 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 HDGFL1Q5TGJ6 251 aa20.67■□□□□ 0.9
SMPD4-202ENST00000409031 LUC7LQ9NQ29 371 aaKnown RBP20.67■□□□□ 0.9
SMPD4-202ENST00000409031 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
SMPD4-202ENST00000409031 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
SMPD4-202ENST00000409031 SMARCC1Q92922 1105 aaPredicted RBP20.66■□□□□ 0.9
SMPD4-202ENST00000409031 SRRTQ9BXP5 876 aaKnown RBP20.66■□□□□ 0.9
SMPD4-202ENST00000409031 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
SMPD4-202ENST00000409031 KDM4AO75164 1064 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 SULT6B1Q6IMI4 303 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 ARHGAP45Q92619 1136 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 EID1Q9Y6B2 187 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 ERLIN2O94905 339 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 GJB2P29033 226 aa20.65■□□□□ 0.9
SMPD4-202ENST00000409031 TXLNAP40222 546 aa20.64■□□□□ 0.9
SMPD4-202ENST00000409031 FSD2A1L4K1 749 aa20.64■□□□□ 0.89
SMPD4-202ENST00000409031 MICALCLQ6ZW33 695 aa20.64■□□□□ 0.89
SMPD4-202ENST00000409031 TMC6Q7Z403 805 aa20.64■□□□□ 0.89
SMPD4-202ENST00000409031 LRRFIP2Q9Y608 721 aaKnown RBP20.64■□□□□ 0.89
SMPD4-202ENST00000409031 EPRSP07814 1512 aaKnown RBP20.64■□□□□ 0.89
SMPD4-202ENST00000409031 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
SMPD4-202ENST00000409031 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
SMPD4-202ENST00000409031 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
SMPD4-202ENST00000409031 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
SMPD4-202ENST00000409031 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
SMPD4-202ENST00000409031 SDSP20132 328 aa20.62■□□□□ 0.89
SMPD4-202ENST00000409031 TFIP11Q9UBB9 837 aaKnown RBP20.62■□□□□ 0.89
SMPD4-202ENST00000409031 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
SMPD4-202ENST00000409031 AACSQ86V21 672 aa20.62■□□□□ 0.89
SMPD4-202ENST00000409031 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
SMPD4-202ENST00000409031 MNAT1P51948 309 aa20.62■□□□□ 0.89
SMPD4-202ENST00000409031 INTS4Q96HW7 963 aaKnown RBP20.62■□□□□ 0.89
SMPD4-202ENST00000409031 CDKL5O76039 1030 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 AIMP1Q12904 312 aaKnown RBP20.61■□□□□ 0.89
SMPD4-202ENST00000409031 CNPY2Q9Y2B0 182 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 STIM1Q13586 685 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 IPO4Q8TEX9 1081 aaKnown RBP20.61■□□□□ 0.89
SMPD4-202ENST00000409031 RASSF4Q9H2L5 321 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 ODF2Q5BJF6 829 aa20.61■□□□□ 0.89
SMPD4-202ENST00000409031 ANO6Q4KMQ2 910 aa20.6■□□□□ 0.89
SMPD4-202ENST00000409031 PLCD4Q9BRC7 762 aa20.6■□□□□ 0.89
SMPD4-202ENST00000409031 THUMPD2Q9BTF0 503 aaKnown RBP20.6■□□□□ 0.89
SMPD4-202ENST00000409031 RLBP1P12271 317 aa20.6■□□□□ 0.89
SMPD4-202ENST00000409031 TRIM22Q8IYM9 498 aa20.6■□□□□ 0.89
SMPD4-202ENST00000409031 FSIP1Q8NA03 581 aa20.59■□□□□ 0.89
SMPD4-202ENST00000409031 GNG11P61952 73 aa20.59■□□□□ 0.89
SMPD4-202ENST00000409031 PTGS1P23219 599 aa20.58■□□□□ 0.89
SMPD4-202ENST00000409031 TRIM34Q9BYJ4 488 aa20.58■□□□□ 0.89
SMPD4-202ENST00000409031 RIOK3O14730 519 aaKnown RBP20.58■□□□□ 0.89
SMPD4-202ENST00000409031 U2AF2P26368 475 aaKnown RBP eCLIP20.58■□□□□ 0.89
SMPD4-202ENST00000409031 EPS15P42566 896 aa20.58■□□□□ 0.89
SMPD4-202ENST00000409031 KIAA1328Q86T90 577 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 PTPRKQ15262 1439 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.88
SMPD4-202ENST00000409031 ERO1AQ96HE7 468 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 CABP1Q9NZU7 370 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 V9GYY5 206 aaPredicted RBP20.58■□□□□ 0.88
SMPD4-202ENST00000409031 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.88
SMPD4-202ENST00000409031 INSRP06213 1382 aa20.57■□□□□ 0.88
SMPD4-202ENST00000409031 FAM177BA6PVY3 158 aa20.57■□□□□ 0.88
SMPD4-202ENST00000409031 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD4-202ENST00000409031 DNAI1Q9UI46 699 aa20.57■□□□□ 0.88
SMPD4-202ENST00000409031 ZGPATQ8N5A5 531 aaKnown RBP20.57■□□□□ 0.88
SMPD4-202ENST00000409031 PRAM1Q96QH2 718 aa20.57■□□□□ 0.88
SMPD4-202ENST00000409031 CCDC141Q6ZP82 1450 aa20.57■□□□□ 0.88
SMPD4-202ENST00000409031 PTPRCP08575 1304 aa20.56■□□□□ 0.88
SMPD4-202ENST00000409031 F13A1P00488 732 aa20.56■□□□□ 0.88
SMPD4-202ENST00000409031 IMMTQ16891 758 aaKnown RBP20.56■□□□□ 0.88
SMPD4-202ENST00000409031 ARHGAP5Q13017 1502 aa20.56■□□□□ 0.88
SMPD4-202ENST00000409031 TYRO3Q06418 890 aa20.56■□□□□ 0.88
SMPD4-202ENST00000409031 VPS53Q5VIR6 699 aa20.55■□□□□ 0.88
SMPD4-202ENST00000409031 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
SMPD4-202ENST00000409031 ZRSR2Q15696 482 aaKnown RBP20.55■□□□□ 0.88
SMPD4-202ENST00000409031 ZSCAN16Q9H4T2 348 aaPredicted RBP20.55■□□□□ 0.88
SMPD4-202ENST00000409031 DACT1Q9NYF0 836 aa20.55■□□□□ 0.88
SMPD4-202ENST00000409031 UTP14CQ5TAP6 766 aaKnown RBP20.55■□□□□ 0.88
SMPD4-202ENST00000409031 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 HMGB1P09429 215 aaKnown RBP20.54■□□□□ 0.88
SMPD4-202ENST00000409031 CAPN2P17655 700 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 AMOTL1Q8IY63 956 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 ZBTB40Q9NUA8 1239 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 RSPH14Q9UHP6 348 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
SMPD4-202ENST00000409031 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
SMPD4-202ENST00000409031 CCDC12Q8WUD4 166 aaPredicted RBP20.54■□□□□ 0.88
SMPD4-202ENST00000409031 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms