RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PRKCSHP14314 528 aaPredicted RBP20.43■□□□□ 0.86
COL23A1-202ENST00000407622 HMMRO75330 724 aa20.42■□□□□ 0.86
COL23A1-202ENST00000407622 FLIIQ13045 1269 aa20.42■□□□□ 0.86
COL23A1-202ENST00000407622 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.42■□□□□ 0.86
COL23A1-202ENST00000407622 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
COL23A1-202ENST00000407622 STK31Q9BXU1 1019 aa20.42■□□□□ 0.86
COL23A1-202ENST00000407622 RRAGDQ9NQL2 400 aaPredicted RBP20.42■□□□□ 0.86
COL23A1-202ENST00000407622 GNAT3A8MTJ3 354 aa20.41■□□□□ 0.86
COL23A1-202ENST00000407622 PDE1AP54750 535 aa20.41■□□□□ 0.86
COL23A1-202ENST00000407622 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
COL23A1-202ENST00000407622 GNAI2P04899 355 aa20.41■□□□□ 0.86
COL23A1-202ENST00000407622 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
COL23A1-202ENST00000407622 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
COL23A1-202ENST00000407622 PNMA6EA0A0J9YXQ4 647 aa20.4■□□□□ 0.86
COL23A1-202ENST00000407622 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
COL23A1-202ENST00000407622 GAS2L3Q86XJ1 694 aa20.39■□□□□ 0.85
COL23A1-202ENST00000407622 ABTB2Q8N961 1025 aa20.38■□□□□ 0.85
COL23A1-202ENST00000407622 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
COL23A1-202ENST00000407622 CCDC30Q5VVM6 783 aa20.38■□□□□ 0.85
COL23A1-202ENST00000407622 CASC1Q6TDU7 716 aa20.38■□□□□ 0.85
COL23A1-202ENST00000407622 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
COL23A1-202ENST00000407622 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
COL23A1-202ENST00000407622 SALL3Q9BXA9 1300 aa20.37■□□□□ 0.85
COL23A1-202ENST00000407622 PKP1Q13835 747 aa20.37■□□□□ 0.85
COL23A1-202ENST00000407622 GRPEL1Q9HAV7 217 aa20.37■□□□□ 0.85
COL23A1-202ENST00000407622 MRE11P49959 708 aa20.37■□□□□ 0.85
COL23A1-202ENST00000407622 TUBGCP6Q96RT7 1819 aa20.36■□□□□ 0.85
COL23A1-202ENST00000407622 ERC2O15083 957 aa20.35■□□□□ 0.85
COL23A1-202ENST00000407622 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
COL23A1-202ENST00000407622 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
COL23A1-202ENST00000407622 LRRFIP2Q9Y608 721 aaKnown RBP20.35■□□□□ 0.85
COL23A1-202ENST00000407622 ZGPATQ8N5A5 531 aaKnown RBP20.35■□□□□ 0.85
COL23A1-202ENST00000407622 REC8O95072 547 aa20.34■□□□□ 0.85
COL23A1-202ENST00000407622 CLEC17AQ6ZS10 378 aa20.34■□□□□ 0.85
COL23A1-202ENST00000407622 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
COL23A1-202ENST00000407622 ATP8B2P98198 1209 aa20.33■□□□□ 0.85
COL23A1-202ENST00000407622 TAF7Q15545 349 aaPredicted RBP20.33■□□□□ 0.85
COL23A1-202ENST00000407622 LRRCC1Q9C099 1032 aa20.33■□□□□ 0.85
COL23A1-202ENST00000407622 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
COL23A1-202ENST00000407622 USP54Q70EL1 1684 aa20.33■□□□□ 0.84
COL23A1-202ENST00000407622 C19orf44Q9H6X5 657 aa20.33■□□□□ 0.84
COL23A1-202ENST00000407622 CACNA1FO60840 1977 aa20.32■□□□□ 0.84
COL23A1-202ENST00000407622 GNAI3P08754 354 aa20.32■□□□□ 0.84
COL23A1-202ENST00000407622 SKOR2Q2VWA4 1001 aaPredicted RBP20.32■□□□□ 0.84
COL23A1-202ENST00000407622 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
COL23A1-202ENST00000407622 LTN1O94822 1766 aa20.32■□□□□ 0.84
COL23A1-202ENST00000407622 STRCQ7RTU9 1775 aa20.32■□□□□ 0.84
COL23A1-202ENST00000407622 CYP2E1P05181 493 aaPredicted RBP20.32■□□□□ 0.84
COL23A1-202ENST00000407622 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
COL23A1-202ENST00000407622 MX1P20591 662 aa20.31■□□□□ 0.84
COL23A1-202ENST00000407622 ESCO1Q5FWF5 840 aa20.31■□□□□ 0.84
COL23A1-202ENST00000407622 STRCP1A6NGW2 1772 aa20.31■□□□□ 0.84
COL23A1-202ENST00000407622 N4BP2Q86UW6 1770 aaPredicted RBP20.31■□□□□ 0.84
COL23A1-202ENST00000407622 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
COL23A1-202ENST00000407622 ST18O60284 1047 aa20.3■□□□□ 0.84
COL23A1-202ENST00000407622 HDGFL1Q5TGJ6 251 aa20.3■□□□□ 0.84
COL23A1-202ENST00000407622 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
COL23A1-202ENST00000407622 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
COL23A1-202ENST00000407622 ESYT1Q9BSJ8 1104 aa20.29■□□□□ 0.84
COL23A1-202ENST00000407622 LGR6Q9HBX8 967 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 PTMSP20962 102 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 NBPF6Q5VWK0 638 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 NBPF4Q96M43 638 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 PALD1Q9ULE6 856 aa20.28■□□□□ 0.84
COL23A1-202ENST00000407622 CHAMP1Q96JM3 812 aa20.27■□□□□ 0.84
COL23A1-202ENST00000407622 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
COL23A1-202ENST00000407622 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
COL23A1-202ENST00000407622 ZDHHC9Q9Y397 364 aa20.27■□□□□ 0.84
COL23A1-202ENST00000407622 DDX49Q9Y6V7 483 aaKnown RBP20.27■□□□□ 0.84
COL23A1-202ENST00000407622 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.84
COL23A1-202ENST00000407622 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
COL23A1-202ENST00000407622 NUCB2P80303 420 aa20.27■□□□□ 0.84
COL23A1-202ENST00000407622 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 TRIM6-TRIM34B2RNG4 842 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
COL23A1-202ENST00000407622 CHMLP26374 656 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 CEMIPQ8WUJ3 1361 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 ZBTB7CA1YPR0 619 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 KCNQ3O43525 872 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 KLHL40Q2TBA0 621 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 IL25Q9H293 177 aa20.26■□□□□ 0.83
COL23A1-202ENST00000407622 NEK4P51957 841 aa20.25■□□□□ 0.83
COL23A1-202ENST00000407622 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
COL23A1-202ENST00000407622 NFAT5O94916 1531 aa20.25■□□□□ 0.83
COL23A1-202ENST00000407622 IP6K1Q92551 441 aa20.25■□□□□ 0.83
COL23A1-202ENST00000407622 STAP2Q9UGK3 403 aa20.25■□□□□ 0.83
COL23A1-202ENST00000407622 SOS1Q07889 1333 aaPredicted RBP20.24■□□□□ 0.83
COL23A1-202ENST00000407622 PSME1Q06323 249 aa20.24■□□□□ 0.83
COL23A1-202ENST00000407622 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
COL23A1-202ENST00000407622 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
COL23A1-202ENST00000407622 LMBRD1Q9NUN5 540 aa20.24■□□□□ 0.83
COL23A1-202ENST00000407622 ANXA1P04083 346 aa20.24■□□□□ 0.83
COL23A1-202ENST00000407622 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
COL23A1-202ENST00000407622 LRRC59Q96AG4 307 aaKnown RBP20.24■□□□□ 0.83
COL23A1-202ENST00000407622 ANO2Q9NQ90 1003 aa20.24■□□□□ 0.83
COL23A1-202ENST00000407622 C1orf167Q5SNV9 1468 aa20.23■□□□□ 0.83
COL23A1-202ENST00000407622 ATF3P18847 181 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms