RNA–Protein interactions for RNA: ENST00000406936.7

COMMD6-205, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD6, Length 1,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-205ENST00000406936 MEGF6O75095 1541 aa11.95□□□□□ -0.5
COMMD6-205ENST00000406936 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
COMMD6-205ENST00000406936 ZNF526Q8TF50 670 aaPredicted RBP11.94□□□□□ -0.5
COMMD6-205ENST00000406936 SYTL4Q96C24 671 aaPredicted RBP11.94□□□□□ -0.5
COMMD6-205ENST00000406936 CCNL1Q9UK58 526 aaPredicted RBP11.94□□□□□ -0.5
COMMD6-205ENST00000406936 C4BP0C0L5 1744 aa11.94□□□□□ -0.5
COMMD6-205ENST00000406936 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
COMMD6-205ENST00000406936 EDC4Q6P2E9 1401 aaKnown RBP11.93□□□□□ -0.5
COMMD6-205ENST00000406936 KIF3CO14782 793 aa11.93□□□□□ -0.5
COMMD6-205ENST00000406936 IP6K1Q92551 441 aa11.93□□□□□ -0.5
COMMD6-205ENST00000406936 KIF13BQ9NQT8 1826 aa11.92□□□□□ -0.5
COMMD6-205ENST00000406936 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
COMMD6-205ENST00000406936 WDR90Q96KV7 1748 aa11.92□□□□□ -0.5
COMMD6-205ENST00000406936 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
COMMD6-205ENST00000406936 ROCK2O75116 1388 aaKnown RBP11.9□□□□□ -0.5
COMMD6-205ENST00000406936 USP47Q96K76 1375 aa11.9□□□□□ -0.5
COMMD6-205ENST00000406936 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
COMMD6-205ENST00000406936 TIE1P35590 1138 aa11.89□□□□□ -0.51
COMMD6-205ENST00000406936 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
COMMD6-205ENST00000406936 SLAIN1Q8ND83 568 aa11.89□□□□□ -0.51
COMMD6-205ENST00000406936 ZCRB1Q8TBF4 217 aaKnown RBP11.89□□□□□ -0.51
COMMD6-205ENST00000406936 LTV1Q96GA3 475 aaPredicted RBP11.89□□□□□ -0.51
COMMD6-205ENST00000406936 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
COMMD6-205ENST00000406936 N4BP2Q86UW6 1770 aaPredicted RBP11.89□□□□□ -0.51
COMMD6-205ENST00000406936 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
COMMD6-205ENST00000406936 A0A1W2PP64 1363 aa11.89□□□□□ -0.51
COMMD6-205ENST00000406936 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
COMMD6-205ENST00000406936 MAP3K19Q56UN5 1328 aa11.88□□□□□ -0.51
COMMD6-205ENST00000406936 SNPHO15079 494 aa11.87□□□□□ -0.51
COMMD6-205ENST00000406936 APLP1P51693 650 aa11.87□□□□□ -0.51
COMMD6-205ENST00000406936 SLC12A5Q9H2X9 1139 aa11.87□□□□□ -0.51
COMMD6-205ENST00000406936 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
COMMD6-205ENST00000406936 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
COMMD6-205ENST00000406936 PKD1L3Q7Z443 1732 aa11.87□□□□□ -0.51
COMMD6-205ENST00000406936 HOXC9P31274 260 aa11.86□□□□□ -0.51
COMMD6-205ENST00000406936 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
COMMD6-205ENST00000406936 PALLDQ8WX93 1383 aa11.86□□□□□ -0.51
COMMD6-205ENST00000406936 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
COMMD6-205ENST00000406936 FBLN1P23142 703 aa11.85□□□□□ -0.51
COMMD6-205ENST00000406936 IER5LQ5T953 404 aa11.85□□□□□ -0.51
COMMD6-205ENST00000406936 SMIM5Q71RC9 77 aa11.85□□□□□ -0.51
COMMD6-205ENST00000406936 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
COMMD6-205ENST00000406936 ARFGEF1Q9Y6D6 1849 aa11.84□□□□□ -0.51
COMMD6-205ENST00000406936 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
COMMD6-205ENST00000406936 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
COMMD6-205ENST00000406936 TOMM70O94826 608 aa11.83□□□□□ -0.52
COMMD6-205ENST00000406936 NBPF6Q5VWK0 638 aa11.83□□□□□ -0.52
COMMD6-205ENST00000406936 NBPF4Q96M43 638 aa11.83□□□□□ -0.52
COMMD6-205ENST00000406936 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
COMMD6-205ENST00000406936 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
COMMD6-205ENST00000406936 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
COMMD6-205ENST00000406936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
COMMD6-205ENST00000406936 AMPHP49418 695 aa11.82□□□□□ -0.52
COMMD6-205ENST00000406936 COL13A1Q5TAT6 717 aaPredicted RBP11.82□□□□□ -0.52
COMMD6-205ENST00000406936 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
COMMD6-205ENST00000406936 NSD3Q9BZ95 1437 aa11.82□□□□□ -0.52
COMMD6-205ENST00000406936 SBF1O95248 1867 aa11.81□□□□□ -0.52
COMMD6-205ENST00000406936 PHF14O94880 888 aa11.81□□□□□ -0.52
COMMD6-205ENST00000406936 AK7Q96M32 723 aa11.81□□□□□ -0.52
COMMD6-205ENST00000406936 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
COMMD6-205ENST00000406936 NMRK2Q9NPI5 230 aa11.81□□□□□ -0.52
COMMD6-205ENST00000406936 KIF20BQ96Q89 1820 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 CYP27B1O15528 508 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
COMMD6-205ENST00000406936 MPRIPQ6WCQ1 1025 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
COMMD6-205ENST00000406936 SSFA2P28290 1259 aa11.79□□□□□ -0.52
COMMD6-205ENST00000406936 COG3Q96JB2 828 aa11.79□□□□□ -0.52
COMMD6-205ENST00000406936 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
COMMD6-205ENST00000406936 C10orf71Q711Q0 1435 aa11.79□□□□□ -0.52
COMMD6-205ENST00000406936 HTRA3P83110 453 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 KLRG1Q96E93 195 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 C4AP0C0L4 1744 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 COL5A3P25940 1745 aaPredicted RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 PIGBQ92521 554 aa11.78□□□□□ -0.52
COMMD6-205ENST00000406936 COLQQ9Y215 455 aaPredicted RBP11.78□□□□□ -0.52
COMMD6-205ENST00000406936 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.52
COMMD6-205ENST00000406936 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.53
COMMD6-205ENST00000406936 MYH14Q7Z406 1995 aaKnown RBP11.77□□□□□ -0.53
COMMD6-205ENST00000406936 NCAPD2Q15021 1401 aa11.77□□□□□ -0.53
COMMD6-205ENST00000406936 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
COMMD6-205ENST00000406936 MMP10P09238 476 aa11.76□□□□□ -0.53
COMMD6-205ENST00000406936 ITPK1Q13572 414 aa11.76□□□□□ -0.53
COMMD6-205ENST00000406936 CARD11Q9BXL7 1154 aa11.76□□□□□ -0.53
COMMD6-205ENST00000406936 INSRP06213 1382 aa11.76□□□□□ -0.53
COMMD6-205ENST00000406936 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
COMMD6-205ENST00000406936 SIK1P57059 783 aa11.75□□□□□ -0.53
COMMD6-205ENST00000406936 A0A0G2JLW4 131 aa11.75□□□□□ -0.53
COMMD6-205ENST00000406936 TGFB2P61812 414 aa11.75□□□□□ -0.53
COMMD6-205ENST00000406936 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms