RNA–Protein interactions for RNA: ENST00000406772.5

GGA1-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2 BASIC

Gene GGA1, Length 3,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-206ENST00000406772 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
GGA1-206ENST00000406772 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
GGA1-206ENST00000406772 NUTM2GQ5VZR2 741 aa17.82■□□□□ 0.44
GGA1-206ENST00000406772 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
GGA1-206ENST00000406772 IL25Q9H293 177 aa17.82■□□□□ 0.44
GGA1-206ENST00000406772 CHMLP26374 656 aa17.81■□□□□ 0.44
GGA1-206ENST00000406772 EIF4A2Q14240 407 aaKnown RBP17.81■□□□□ 0.44
GGA1-206ENST00000406772 CCDC83Q8IWF9 413 aa17.81■□□□□ 0.44
GGA1-206ENST00000406772 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
GGA1-206ENST00000406772 C14orf37Q86TY3 774 aa17.8■□□□□ 0.44
GGA1-206ENST00000406772 MROH1Q8NDA8 1641 aa17.8■□□□□ 0.44
GGA1-206ENST00000406772 FAM173BQ6P4H8 233 aa17.8■□□□□ 0.44
GGA1-206ENST00000406772 TAOK2Q9UL54 1235 aa17.8■□□□□ 0.44
GGA1-206ENST00000406772 HAP1P54257 671 aaPredicted RBP17.79■□□□□ 0.44
GGA1-206ENST00000406772 CHAF1AQ13111 956 aaPredicted RBP17.79■□□□□ 0.44
GGA1-206ENST00000406772 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
GGA1-206ENST00000406772 ZNF592Q92610 1267 aa17.79■□□□□ 0.44
GGA1-206ENST00000406772 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
GGA1-206ENST00000406772 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
GGA1-206ENST00000406772 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 PNPLA6Q8IY17 1366 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 MCM5P33992 734 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 MCM2P49736 904 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 PIK3R4Q99570 1358 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 DNM1Q05193 864 aaKnown RBP17.78■□□□□ 0.44
GGA1-206ENST00000406772 KIF3AQ9Y496 699 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
GGA1-206ENST00000406772 FOSBP53539 338 aa17.77■□□□□ 0.44
GGA1-206ENST00000406772 CCDC183Q5T5S1 534 aa17.77■□□□□ 0.44
GGA1-206ENST00000406772 NECAB1Q8N987 351 aa17.77■□□□□ 0.44
GGA1-206ENST00000406772 CASTP20810 708 aaKnown RBP17.77■□□□□ 0.44
GGA1-206ENST00000406772 CKAP2LQ8IYA6 745 aa17.77■□□□□ 0.44
GGA1-206ENST00000406772 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
GGA1-206ENST00000406772 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.43
GGA1-206ENST00000406772 FBXW7Q969H0 707 aa17.77■□□□□ 0.43
GGA1-206ENST00000406772 TERF1P54274 439 aa17.76■□□□□ 0.43
GGA1-206ENST00000406772 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
GGA1-206ENST00000406772 UBTFL1P0CB47 393 aaPredicted RBP17.76■□□□□ 0.43
GGA1-206ENST00000406772 INO80Q9ULG1 1556 aaPredicted RBP17.76■□□□□ 0.43
GGA1-206ENST00000406772 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
GGA1-206ENST00000406772 ANXA1P04083 346 aa17.76■□□□□ 0.43
GGA1-206ENST00000406772 MYRIPQ8NFW9 859 aa17.76■□□□□ 0.43
GGA1-206ENST00000406772 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 CHL1O00533 1208 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 STX6O43752 255 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
GGA1-206ENST00000406772 AK2P54819 239 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 FLIIQ13045 1269 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 SYT1P21579 422 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 CCDC94Q9BW85 323 aaPredicted RBP17.75■□□□□ 0.43
GGA1-206ENST00000406772 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
GGA1-206ENST00000406772 AMPHP49418 695 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 PRDM4Q9UKN5 801 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 ABCC3O15438 1527 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 MTERF4Q7Z6M4 381 aaKnown RBP17.74■□□□□ 0.43
GGA1-206ENST00000406772 C16orf45Q96MC5 204 aaPredicted RBP17.74■□□□□ 0.43
GGA1-206ENST00000406772 ZC3H13Q5T200 1668 aaKnown RBP17.74■□□□□ 0.43
GGA1-206ENST00000406772 STK3Q13188 491 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 PIBF1Q8WXW3 757 aa17.74■□□□□ 0.43
GGA1-206ENST00000406772 JAKMIP1Q96N16 626 aaKnown RBP17.74■□□□□ 0.43
GGA1-206ENST00000406772 PTPRCP08575 1304 aa17.73■□□□□ 0.43
GGA1-206ENST00000406772 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■■□□ 17.3
GGA1-206ENST00000406772 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
GGA1-206ENST00000406772 PDCL2Q8N4E4 241 aa17.73■□□□□ 0.43
GGA1-206ENST00000406772 TFIP11Q9UBB9 837 aaKnown RBP17.73■□□□□ 0.43
GGA1-206ENST00000406772 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
GGA1-206ENST00000406772 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
GGA1-206ENST00000406772 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
GGA1-206ENST00000406772 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
GGA1-206ENST00000406772 LARGE1O95461 756 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 PRPF40BQ6NWY9 871 aaKnown RBP17.72■□□□□ 0.43
GGA1-206ENST00000406772 BCL2L12Q9HB09 334 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 GJB2P29033 226 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 NPHP1O15259 732 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 GNAI3P08754 354 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 HMGN5P82970 282 aaKnown RBP17.72■□□□□ 0.43
GGA1-206ENST00000406772 CUL4AQ13619 759 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 ZNF710Q8N1W2 664 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
GGA1-206ENST00000406772 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
GGA1-206ENST00000406772 PPLO60437 1756 aa17.71■□□□□ 0.43
GGA1-206ENST00000406772 RIOK3O14730 519 aaKnown RBP17.71■□□□□ 0.43
GGA1-206ENST00000406772 PTGS1P23219 599 aa17.71■□□□□ 0.43
GGA1-206ENST00000406772 CEBPZQ03701 1054 aaKnown RBP17.71■□□□□ 0.43
GGA1-206ENST00000406772 ATP2B3Q16720 1220 aa17.71■□□□□ 0.43
GGA1-206ENST00000406772 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
GGA1-206ENST00000406772 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.42
GGA1-206ENST00000406772 ARHGEF28Q8N1W1 1705 aaKnown RBP17.71■□□□□ 0.42
GGA1-206ENST00000406772 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 KDM4AO75164 1064 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 LUZP1Q86V48 1076 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 FAM184AQ8NB25 1140 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 USHBP1Q8N6Y0 703 aa17.7■□□□□ 0.42
GGA1-206ENST00000406772 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms