RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
CGREF1-205ENST00000404694 PTGER2P43116 358 aa22.06■■□□□ 1.12
CGREF1-205ENST00000404694 MIER1Q8N108 512 aa22.06■■□□□ 1.12
CGREF1-205ENST00000404694 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
CGREF1-205ENST00000404694 ZNF831Q5JPB2 1677 aa22.06■■□□□ 1.12
CGREF1-205ENST00000404694 NUDCQ9Y266 331 aa22.05■■□□□ 1.12
CGREF1-205ENST00000404694 MRC1P22897 1456 aa22.05■■□□□ 1.12
CGREF1-205ENST00000404694 UBR3Q6ZT12 1888 aa22.04■■□□□ 1.12
CGREF1-205ENST00000404694 COL24A1Q17RW2 1714 aa22.04■■□□□ 1.12
CGREF1-205ENST00000404694 NFATC2IPQ8NCF5 419 aa22.03■■□□□ 1.12
CGREF1-205ENST00000404694 SLC16A10Q8TF71 515 aa22.03■■□□□ 1.12
CGREF1-205ENST00000404694 SGIP1Q9BQI5 828 aa22.03■■□□□ 1.12
CGREF1-205ENST00000404694 RSPH6AQ9H0K4 717 aa22.03■■□□□ 1.12
CGREF1-205ENST00000404694 ATP6V1AP38606 617 aa22.02■■□□□ 1.12
CGREF1-205ENST00000404694 ITPK1Q13572 414 aa22.02■■□□□ 1.12
CGREF1-205ENST00000404694 LINC00116Q8NCU8 138 aa22.02■■□□□ 1.12
CGREF1-205ENST00000404694 LGR6Q9HBX8 967 aa22.02■■□□□ 1.12
CGREF1-205ENST00000404694 COL5A3P25940 1745 aaPredicted RBP22.02■■□□□ 1.12
CGREF1-205ENST00000404694 RNMTO43148 476 aaKnown RBP22.01■■□□□ 1.11
CGREF1-205ENST00000404694 U2AF1L5P0DN76 240 aaPredicted RBP22■■□□□ 1.11
CGREF1-205ENST00000404694 PRKAR2BP31323 418 aa22■■□□□ 1.11
CGREF1-205ENST00000404694 U2AF1Q01081 240 aaKnown RBP eCLIP22■■□□□ 1.11
CGREF1-205ENST00000404694 COL23A1Q86Y22 540 aaPredicted RBP22■■□□□ 1.11
CGREF1-205ENST00000404694 GAS2L2Q8NHY3 880 aa22■■□□□ 1.11
CGREF1-205ENST00000404694 AK7Q96M32 723 aa22■■□□□ 1.11
CGREF1-205ENST00000404694 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
CGREF1-205ENST00000404694 SLC52A2Q9HAB3 445 aa22■■□□□ 1.11
CGREF1-205ENST00000404694 RBM42Q9BTD8 480 aaKnown RBP21.99■■□□□ 1.11
CGREF1-205ENST00000404694 MAP3K5Q99683 1374 aa21.99■■□□□ 1.11
CGREF1-205ENST00000404694 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
CGREF1-205ENST00000404694 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
CGREF1-205ENST00000404694 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
CGREF1-205ENST00000404694 RALBP1Q15311 655 aa21.98■■□□□ 1.11
CGREF1-205ENST00000404694 AMIGO3Q86WK7 504 aa21.98■■□□□ 1.11
CGREF1-205ENST00000404694 PHACTR3Q96KR7 559 aa21.98■■□□□ 1.11
CGREF1-205ENST00000404694 TJP1Q07157 1748 aa21.97■■□□□ 1.11
CGREF1-205ENST00000404694 MSH5O43196 834 aa21.97■■□□□ 1.11
CGREF1-205ENST00000404694 FCHSD2O94868 740 aa21.97■■□□□ 1.11
CGREF1-205ENST00000404694 FLAD1Q8NFF5 587 aa21.97■■□□□ 1.11
CGREF1-205ENST00000404694 GNAT3A8MTJ3 354 aa21.96■■□□□ 1.11
CGREF1-205ENST00000404694 PTCD1O75127 700 aaKnown RBP21.96■■□□□ 1.11
CGREF1-205ENST00000404694 SIPA1L3O60292 1781 aaPredicted RBP21.95■■□□□ 1.1
CGREF1-205ENST00000404694 GNPATO15228 680 aa21.94■■□□□ 1.1
CGREF1-205ENST00000404694 PHF14O94880 888 aa21.94■■□□□ 1.1
CGREF1-205ENST00000404694 SSFA2P28290 1259 aa21.94■■□□□ 1.1
CGREF1-205ENST00000404694 SMIM5Q71RC9 77 aa21.94■■□□□ 1.1
CGREF1-205ENST00000404694 ARXQ96QS3 562 aa21.94■■□□□ 1.1
CGREF1-205ENST00000404694 UBR2Q8IWV8 1755 aa21.93■■□□□ 1.1
CGREF1-205ENST00000404694 KCPQ6ZWJ8 1503 aa21.93■■□□□ 1.1
CGREF1-205ENST00000404694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.93■■□□□ 1.1
CGREF1-205ENST00000404694 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
CGREF1-205ENST00000404694 POLD1P28340 1107 aa21.92■■□□□ 1.1
CGREF1-205ENST00000404694 IL17REQ8NFR9 667 aa21.92■■□□□ 1.1
CGREF1-205ENST00000404694 FHDC1Q9C0D6 1143 aaPredicted RBP21.92■■□□□ 1.1
CGREF1-205ENST00000404694 CNTNAP4Q9C0A0 1308 aa21.91■■□□□ 1.1
CGREF1-205ENST00000404694 SLC39A6Q13433 755 aa21.91■■□□□ 1.1
CGREF1-205ENST00000404694 CEMIPQ8WUJ3 1361 aa21.91■■□□□ 1.1
CGREF1-205ENST00000404694 MYBBP1AQ9BQG0 1328 aaKnown RBP21.91■■□□□ 1.1
CGREF1-205ENST00000404694 MSL1Q68DK7 614 aa21.9■■□□□ 1.1
CGREF1-205ENST00000404694 TEFQ10587 303 aa21.89■■□□□ 1.1
CGREF1-205ENST00000404694 RC3H1Q5TC82 1133 aaKnown RBP21.89■■□□□ 1.1
CGREF1-205ENST00000404694 SYT17Q9BSW7 474 aa21.88■■□□□ 1.09
CGREF1-205ENST00000404694 RTCBQ9Y3I0 505 aaKnown RBP21.88■■□□□ 1.09
CGREF1-205ENST00000404694 C4AP0C0L4 1744 aa21.88■■□□□ 1.09
CGREF1-205ENST00000404694 DLG5Q8TDM6 1919 aa21.88■■□□□ 1.09
CGREF1-205ENST00000404694 CRKLP46109 303 aaKnown RBP21.87■■□□□ 1.09
CGREF1-205ENST00000404694 RPS6KA4O75676 772 aa21.85■■□□□ 1.09
CGREF1-205ENST00000404694 DNAJC10Q8IXB1 793 aa21.85■■□□□ 1.09
CGREF1-205ENST00000404694 PLEKHF1Q96S99 279 aa21.85■■□□□ 1.09
CGREF1-205ENST00000404694 NEFMP07197 916 aa21.84■■□□□ 1.09
CGREF1-205ENST00000404694 ADRA2BP18089 450 aa21.84■■□□□ 1.09
CGREF1-205ENST00000404694 TTC5Q8N0Z6 440 aa21.84■■□□□ 1.09
CGREF1-205ENST00000404694 RTF1Q92541 710 aaKnown RBP21.84■■□□□ 1.09
CGREF1-205ENST00000404694 TRAPPC3LQ5T215 181 aa21.83■■□□□ 1.08
CGREF1-205ENST00000404694 ZNF790Q6PG37 636 aa21.83■■□□□ 1.08
CGREF1-205ENST00000404694 MCM10Q7L590 875 aa21.83■■□□□ 1.08
CGREF1-205ENST00000404694 VSIG10Q8N0Z9 540 aa21.83■■□□□ 1.08
CGREF1-205ENST00000404694 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
CGREF1-205ENST00000404694 KLHL34Q8N239 644 aa21.82■■□□□ 1.08
CGREF1-205ENST00000404694 ARHGEF1Q92888 912 aaKnown RBP21.82■■□□□ 1.08
CGREF1-205ENST00000404694 GOLGB1Q14789 3259 aaKnown RBP21.82■■□□□ 1.08
CGREF1-205ENST00000404694 UTRNP46939 3433 aa21.81■■□□□ 1.08
CGREF1-205ENST00000404694 DCTN1Q14203 1278 aa21.81■■□□□ 1.08
CGREF1-205ENST00000404694 INTS5Q6P9B9 1019 aaKnown RBP21.81■■□□□ 1.08
CGREF1-205ENST00000404694 CYP19A1P11511 503 aaPredicted RBP21.8■■□□□ 1.08
CGREF1-205ENST00000404694 ZNF496Q96IT1 587 aaPredicted RBP21.8■■□□□ 1.08
CGREF1-205ENST00000404694 PNNQ9H307 717 aaKnown RBP21.8■■□□□ 1.08
CGREF1-205ENST00000404694 CCDC87Q9NVE4 849 aa21.8■■□□□ 1.08
CGREF1-205ENST00000404694 HEG1Q9ULI3 1381 aa21.8■■□□□ 1.08
CGREF1-205ENST00000404694 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
CGREF1-205ENST00000404694 RFC4P35249 363 aa21.79■■□□□ 1.08
CGREF1-205ENST00000404694 MAPK8IP3Q9UPT6 1336 aa21.79■■□□□ 1.08
CGREF1-205ENST00000404694 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
CGREF1-205ENST00000404694 DCAF8L1A6NGE4 600 aa21.77■■□□□ 1.08
CGREF1-205ENST00000404694 KCNQ3O43525 872 aa21.76■■□□□ 1.07
CGREF1-205ENST00000404694 GYS1P13807 737 aa21.76■■□□□ 1.07
CGREF1-205ENST00000404694 NLGN2Q8NFZ4 835 aa21.76■■□□□ 1.07
CGREF1-205ENST00000404694 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
CGREF1-205ENST00000404694 ZBTB1Q9Y2K1 713 aa21.76■■□□□ 1.07
CGREF1-205ENST00000404694 SOS1Q07889 1333 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 809.4 ms