RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 SLC27A3Q5K4L6 730 aa19.34■□□□□ 0.69
CDPF1-203ENST00000404583 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
CDPF1-203ENST00000404583 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
CDPF1-203ENST00000404583 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.68
CDPF1-203ENST00000404583 CCDC146Q8IYE0 955 aa19.33■□□□□ 0.68
CDPF1-203ENST00000404583 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.68
CDPF1-203ENST00000404583 NFE2L2Q16236 605 aa19.31■□□□□ 0.68
CDPF1-203ENST00000404583 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
CDPF1-203ENST00000404583 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
CDPF1-203ENST00000404583 DCTN1Q14203 1278 aa19.3■□□□□ 0.68
CDPF1-203ENST00000404583 MCM10Q7L590 875 aa19.3■□□□□ 0.68
CDPF1-203ENST00000404583 MRC1P22897 1456 aa19.3■□□□□ 0.68
CDPF1-203ENST00000404583 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
CDPF1-203ENST00000404583 SIK1P57059 783 aa19.29■□□□□ 0.68
CDPF1-203ENST00000404583 TEFQ10587 303 aa19.29■□□□□ 0.68
CDPF1-203ENST00000404583 PAPPAQ13219 1627 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
CDPF1-203ENST00000404583 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 CEMIPQ8WUJ3 1361 aa19.28■□□□□ 0.68
CDPF1-203ENST00000404583 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
CDPF1-203ENST00000404583 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
CDPF1-203ENST00000404583 SLC15A2Q16348 729 aa19.27■□□□□ 0.68
CDPF1-203ENST00000404583 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
CDPF1-203ENST00000404583 ATP6V1AP38606 617 aa19.26■□□□□ 0.67
CDPF1-203ENST00000404583 TMPOP42166 694 aaKnown RBP19.26■□□□□ 0.67
CDPF1-203ENST00000404583 ZNF827Q17R98 1081 aa19.26■□□□□ 0.67
CDPF1-203ENST00000404583 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
CDPF1-203ENST00000404583 C5P01031 1676 aa19.26■□□□□ 0.67
CDPF1-203ENST00000404583 RIPK4P57078 832 aa19.25■□□□□ 0.67
CDPF1-203ENST00000404583 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
CDPF1-203ENST00000404583 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
CDPF1-203ENST00000404583 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
CDPF1-203ENST00000404583 NEUROD2Q15784 382 aa19.25■□□□□ 0.67
CDPF1-203ENST00000404583 ITPK1Q13572 414 aa19.24■□□□□ 0.67
CDPF1-203ENST00000404583 LINC00116Q8NCU8 138 aa19.23■□□□□ 0.67
CDPF1-203ENST00000404583 THUMPD2Q9BTF0 503 aaKnown RBP19.23■□□□□ 0.67
CDPF1-203ENST00000404583 PDGFDQ9GZP0 370 aaPredicted RBP19.23■□□□□ 0.67
CDPF1-203ENST00000404583 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
CDPF1-203ENST00000404583 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
CDPF1-203ENST00000404583 TUBGCP6Q96RT7 1819 aa19.22■□□□□ 0.67
CDPF1-203ENST00000404583 C4BP0C0L5 1744 aa19.21■□□□□ 0.67
CDPF1-203ENST00000404583 CASZ1Q86V15 1759 aa19.21■□□□□ 0.67
CDPF1-203ENST00000404583 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
CDPF1-203ENST00000404583 ZNF831Q5JPB2 1677 aa19.21■□□□□ 0.67
CDPF1-203ENST00000404583 APAF1O14727 1248 aa19.2■□□□□ 0.66
CDPF1-203ENST00000404583 HMGB2P26583 209 aaKnown RBP19.2■□□□□ 0.66
CDPF1-203ENST00000404583 ZNF790Q6PG37 636 aa19.2■□□□□ 0.66
CDPF1-203ENST00000404583 TTC5Q8N0Z6 440 aa19.2■□□□□ 0.66
CDPF1-203ENST00000404583 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
CDPF1-203ENST00000404583 KCPQ6ZWJ8 1503 aa19.2■□□□□ 0.66
CDPF1-203ENST00000404583 KCNQ3O43525 872 aa19.19■□□□□ 0.66
CDPF1-203ENST00000404583 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
CDPF1-203ENST00000404583 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
CDPF1-203ENST00000404583 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
CDPF1-203ENST00000404583 TRIM35Q9UPQ4 493 aa19.18■□□□□ 0.66
CDPF1-203ENST00000404583 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
CDPF1-203ENST00000404583 TJP1Q07157 1748 aa19.18■□□□□ 0.66
CDPF1-203ENST00000404583 QSER1Q2KHR3 1735 aa19.18■□□□□ 0.66
CDPF1-203ENST00000404583 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
CDPF1-203ENST00000404583 AK7Q96M32 723 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 SENP3-EIF4A1A0A087X0R7 540 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 MYH14Q7Z406 1995 aaKnown RBP19.17■□□□□ 0.66
CDPF1-203ENST00000404583 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 SPON1Q9HCB6 807 aa19.17■□□□□ 0.66
CDPF1-203ENST00000404583 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
CDPF1-203ENST00000404583 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
CDPF1-203ENST00000404583 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
CDPF1-203ENST00000404583 ZBTB7AO95365 584 aa19.15■□□□□ 0.66
CDPF1-203ENST00000404583 VSIG10Q8N0Z9 540 aa19.15■□□□□ 0.66
CDPF1-203ENST00000404583 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
CDPF1-203ENST00000404583 GNPATO15228 680 aa19.14■□□□□ 0.65
CDPF1-203ENST00000404583 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.65
CDPF1-203ENST00000404583 HEG1Q9ULI3 1381 aa19.13■□□□□ 0.65
CDPF1-203ENST00000404583 RC3H1Q5TC82 1133 aaKnown RBP19.13■□□□□ 0.65
CDPF1-203ENST00000404583 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
CDPF1-203ENST00000404583 KDM3BQ7LBC6 1761 aa19.13■□□□□ 0.65
CDPF1-203ENST00000404583 CNTNAP4Q9C0A0 1308 aa19.12■□□□□ 0.65
CDPF1-203ENST00000404583 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
CDPF1-203ENST00000404583 MSH5O43196 834 aa19.12■□□□□ 0.65
CDPF1-203ENST00000404583 PHF14O94880 888 aa19.12■□□□□ 0.65
CDPF1-203ENST00000404583 CRKLP46109 303 aaKnown RBP19.12■□□□□ 0.65
CDPF1-203ENST00000404583 MIER1Q8N108 512 aa19.12■□□□□ 0.65
CDPF1-203ENST00000404583 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
CDPF1-203ENST00000404583 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
CDPF1-203ENST00000404583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.1■□□□□ 0.65
CDPF1-203ENST00000404583 INTS5Q6P9B9 1019 aaKnown RBP19.1■□□□□ 0.65
CDPF1-203ENST00000404583 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
CDPF1-203ENST00000404583 TSPYL4Q9UJ04 414 aa19.1■□□□□ 0.65
CDPF1-203ENST00000404583 RTCBQ9Y3I0 505 aaKnown RBP19.1■□□□□ 0.65
CDPF1-203ENST00000404583 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
CDPF1-203ENST00000404583 RPS6KA4O75676 772 aa19.09■□□□□ 0.65
CDPF1-203ENST00000404583 SSFA2P28290 1259 aa19.09■□□□□ 0.65
CDPF1-203ENST00000404583 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
CDPF1-203ENST00000404583 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms