RNA–Protein interactions for RNA: ENST00000404574.5

SMTN-204, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-204ENST00000404574 RBM6P78332 1123 aaKnown RBP25.46■■□□□ 1.67
SMTN-204ENST00000404574 SEPT12Q8IYM1 358 aa25.46■■□□□ 1.67
SMTN-204ENST00000404574 MARCH10Q8NA82 808 aaPredicted RBP25.46■■□□□ 1.67
SMTN-204ENST00000404574 CT47B1P0C2W7 299 aaPredicted RBP25.46■■□□□ 1.67
SMTN-204ENST00000404574 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.66
SMTN-204ENST00000404574 VIRMAQ69YN4 1812 aaKnown RBP25.45■■□□□ 1.66
SMTN-204ENST00000404574 MRC1P22897 1456 aa25.44■■□□□ 1.66
SMTN-204ENST00000404574 TMOD3Q9NYL9 352 aa25.43■■□□□ 1.66
SMTN-204ENST00000404574 ILDR1Q86SU0 546 aaPredicted RBP25.42■■□□□ 1.66
SMTN-204ENST00000404574 RXRBP28702 533 aa25.41■■□□□ 1.66
SMTN-204ENST00000404574 ELL2O00472 640 aaPredicted RBP25.4■■□□□ 1.66
SMTN-204ENST00000404574 TWISTNBQ3B726 338 aaPredicted RBP25.4■■□□□ 1.66
SMTN-204ENST00000404574 C8orf58Q8NAV2 365 aa25.4■■□□□ 1.66
SMTN-204ENST00000404574 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
SMTN-204ENST00000404574 TTC5Q8N0Z6 440 aa25.39■■□□□ 1.65
SMTN-204ENST00000404574 TSPYL6Q8N831 410 aa25.39■■□□□ 1.65
SMTN-204ENST00000404574 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.65
SMTN-204ENST00000404574 SUPT16HQ9Y5B9 1047 aaKnown RBP25.39■■□□□ 1.65
SMTN-204ENST00000404574 SIPA1L3O60292 1781 aaPredicted RBP25.38■■□□□ 1.65
SMTN-204ENST00000404574 ZNF428Q96B54 188 aa25.38■■□□□ 1.65
SMTN-204ENST00000404574 RGS17Q9UGC6 210 aaPredicted RBP25.38■■□□□ 1.65
SMTN-204ENST00000404574 EIF4A1P60842 406 aaKnown RBP25.37■■□□□ 1.65
SMTN-204ENST00000404574 SLC39A6Q13433 755 aa25.37■■□□□ 1.65
SMTN-204ENST00000404574 KCNQ3O43525 872 aa25.37■■□□□ 1.65
SMTN-204ENST00000404574 VAMP4O75379 141 aa25.37■■□□□ 1.65
SMTN-204ENST00000404574 PRIM1P49642 420 aaKnown RBP25.37■■□□□ 1.65
SMTN-204ENST00000404574 KRT24Q2M2I5 525 aa25.37■■□□□ 1.65
SMTN-204ENST00000404574 GTF3C3Q9Y5Q9 886 aa25.36■■□□□ 1.65
SMTN-204ENST00000404574 PIGBQ92521 554 aa25.35■■□□□ 1.65
SMTN-204ENST00000404574 ACSBG1Q96GR2 724 aa25.35■■□□□ 1.65
SMTN-204ENST00000404574 TOGARAM1Q9Y4F4 1720 aa25.35■■□□□ 1.65
SMTN-204ENST00000404574 RARSP54136 660 aaKnown RBP25.34■■□□□ 1.65
SMTN-204ENST00000404574 SOS1Q07889 1333 aaPredicted RBP25.34■■□□□ 1.65
SMTN-204ENST00000404574 KDM3BQ7LBC6 1761 aa25.34■■□□□ 1.65
SMTN-204ENST00000404574 POTEAQ6S8J7 498 aa25.33■■□□□ 1.65
SMTN-204ENST00000404574 KRT27Q7Z3Y8 459 aa25.33■■□□□ 1.65
SMTN-204ENST00000404574 BCL9O00512 1426 aa25.32■■□□□ 1.64
SMTN-204ENST00000404574 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
SMTN-204ENST00000404574 CHMP4AQ9BY43 222 aa25.32■■□□□ 1.64
SMTN-204ENST00000404574 HOXB7P09629 217 aa25.31■■□□□ 1.64
SMTN-204ENST00000404574 ALDH1L2Q3SY69 923 aa25.31■■□□□ 1.64
SMTN-204ENST00000404574 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
SMTN-204ENST00000404574 KAT6BQ8WYB5 2073 aa25.3■■□□□ 1.64
SMTN-204ENST00000404574 BCAR3O75815 825 aa25.3■■□□□ 1.64
SMTN-204ENST00000404574 SMC4Q9NTJ3 1288 aa25.3■■□□□ 1.64
SMTN-204ENST00000404574 DOT1LQ8TEK3 1739 aa25.3■■□□□ 1.64
SMTN-204ENST00000404574 ZNF496Q96IT1 587 aaPredicted RBP25.29■■□□□ 1.64
SMTN-204ENST00000404574 BCL2L13Q9BXK5 485 aa25.29■■□□□ 1.64
SMTN-204ENST00000404574 GIGYF1O75420 1035 aaPredicted RBP25.29■■□□□ 1.64
SMTN-204ENST00000404574 SSH1Q8WYL5 1049 aa25.29■■□□□ 1.64
SMTN-204ENST00000404574 ASAP1Q9ULH1 1129 aa25.29■■□□□ 1.64
SMTN-204ENST00000404574 ITGB4P16144 1822 aa25.28■■□□□ 1.64
SMTN-204ENST00000404574 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.28■■□□□ 1.64
SMTN-204ENST00000404574 HEG1Q9ULI3 1381 aa25.28■■□□□ 1.64
SMTN-204ENST00000404574 CCDC30Q5VVM6 783 aa25.27■■□□□ 1.64
SMTN-204ENST00000404574 ATG3Q9NT62 314 aa25.27■■□□□ 1.64
SMTN-204ENST00000404574 KCNQ2O43526 872 aa25.26■■□□□ 1.63
SMTN-204ENST00000404574 PTCD1O75127 700 aaKnown RBP25.26■■□□□ 1.63
SMTN-204ENST00000404574 FAM196AQ6ZSG2 479 aa25.26■■□□□ 1.63
SMTN-204ENST00000404574 SNRPA1P09661 255 aaKnown RBP25.26■■□□□ 1.63
SMTN-204ENST00000404574 RRP1P56182 461 aaKnown RBP25.26■■□□□ 1.63
SMTN-204ENST00000404574 HDGFL1Q5TGJ6 251 aa25.26■■□□□ 1.63
SMTN-204ENST00000404574 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
SMTN-204ENST00000404574 NEFLP07196 543 aa25.24■■□□□ 1.63
SMTN-204ENST00000404574 EIF2S2P20042 333 aaKnown RBP25.24■■□□□ 1.63
SMTN-204ENST00000404574 STK31Q9BXU1 1019 aa25.24■■□□□ 1.63
SMTN-204ENST00000404574 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
SMTN-204ENST00000404574 CANXP27824 592 aaKnown RBP25.23■■□□□ 1.63
SMTN-204ENST00000404574 NECTIN2Q92692 538 aa25.23■■□□□ 1.63
SMTN-204ENST00000404574 FRAT1Q92837 279 aaPredicted RBP25.23■■□□□ 1.63
SMTN-204ENST00000404574 RBM42Q9BTD8 480 aaKnown RBP25.23■■□□□ 1.63
SMTN-204ENST00000404574 RGS12O14924 1447 aa25.22■■□□□ 1.63
SMTN-204ENST00000404574 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
SMTN-204ENST00000404574 BRWD3Q6RI45 1802 aa25.22■■□□□ 1.63
SMTN-204ENST00000404574 SMARCC1Q92922 1105 aaPredicted RBP25.22■■□□□ 1.63
SMTN-204ENST00000404574 KIF16BQ96L93 1317 aa25.21■■□□□ 1.63
SMTN-204ENST00000404574 PLIN1O60240 522 aa25.21■■□□□ 1.63
SMTN-204ENST00000404574 BRPF1P55201 1214 aaPredicted RBP25.21■■□□□ 1.63
SMTN-204ENST00000404574 MRPL50Q8N5N7 158 aaKnown RBP25.21■■□□□ 1.63
SMTN-204ENST00000404574 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.63
SMTN-204ENST00000404574 KCPQ6ZWJ8 1503 aa25.2■■□□□ 1.62
SMTN-204ENST00000404574 SLC4A2P04920 1241 aa25.2■■□□□ 1.62
SMTN-204ENST00000404574 VSIG10Q8N0Z9 540 aa25.2■■□□□ 1.62
SMTN-204ENST00000404574 IPO8O15397 1037 aaKnown RBP25.19■■□□□ 1.62
SMTN-204ENST00000404574 TEX13AQ9BXU3 409 aaPredicted RBP25.18■■□□□ 1.62
SMTN-204ENST00000404574 UBR2Q8IWV8 1755 aa25.18■■□□□ 1.62
SMTN-204ENST00000404574 BCL11BQ9C0K0 894 aaPredicted RBP25.17■■□□□ 1.62
SMTN-204ENST00000404574 NOB1Q9ULX3 412 aaKnown RBP25.17■■□□□ 1.62
SMTN-204ENST00000404574 USP16Q9Y5T5 823 aa25.17■■□□□ 1.62
SMTN-204ENST00000404574 ZKSCAN2Q63HK3 967 aa25.17■■□□□ 1.62
SMTN-204ENST00000404574 DBF4Q9UBU7 674 aaPredicted RBP25.17■■□□□ 1.62
SMTN-204ENST00000404574 NHSQ6T4R5 1651 aa25.16■■□□□ 1.62
SMTN-204ENST00000404574 PALLDQ8WX93 1383 aa25.16■■□□□ 1.62
SMTN-204ENST00000404574 PTF1AQ7RTS3 328 aa25.15■■□□□ 1.62
SMTN-204ENST00000404574 CHPF2Q9P2E5 772 aa25.15■■□□□ 1.62
SMTN-204ENST00000404574 LOC102724428A0A0B4J2F2 783 aa25.13■■□□□ 1.61
SMTN-204ENST00000404574 STARD3NLO95772 234 aa25.13■■□□□ 1.61
SMTN-204ENST00000404574 SIK1P57059 783 aa25.13■■□□□ 1.61
SMTN-204ENST00000404574 IRX6P78412 446 aaPredicted RBP25.13■■□□□ 1.61
SMTN-204ENST00000404574 ARHGAP45Q92619 1136 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms