RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P19-201ENST00000403971 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
HMGB3P19-201ENST00000403971 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
HMGB3P19-201ENST00000403971 M0R2N6 131 aa9.08□□□□□ -0.96
HMGB3P19-201ENST00000403971 SCNN1AP37088 669 aa9.08□□□□□ -0.96
HMGB3P19-201ENST00000403971 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
HMGB3P19-201ENST00000403971 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
HMGB3P19-201ENST00000403971 BACH1O14867 736 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 ATP2B4P23634 1241 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 EPHA4P54764 986 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 CLN3Q13286 438 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 SLC4A9Q96Q91 983 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 HRH3Q9Y5N1 445 aa9.07□□□□□ -0.96
HMGB3P19-201ENST00000403971 NRG2O14511 850 aaPredicted RBP9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 BRD1O95696 1058 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 AVPP01185 164 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 SSFA2P28290 1259 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 OCLNQ16625 522 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 PURBQ96QR8 312 aaKnown RBP9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 USP3Q9Y6I4 520 aa9.06□□□□□ -0.96
HMGB3P19-201ENST00000403971 A6NJY4 79 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 BMP1P13497 986 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 SMTNP53814 917 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 TLR1Q15399 786 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 PKDCCQ504Y2 493 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 INSM2Q96T92 566 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P19-201ENST00000403971 CENPCQ03188 943 aa9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 NLRP3Q96P20 1036 aa9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 CXXC1Q9P0U4 656 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P19-201ENST00000403971 C21orf2O43822 256 aa9.03□□□□□ -0.96
HMGB3P19-201ENST00000403971 DGAT1O75907 488 aa9.03□□□□□ -0.96
HMGB3P19-201ENST00000403971 WEE1P30291 646 aa9.03□□□□□ -0.96
HMGB3P19-201ENST00000403971 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
HMGB3P19-201ENST00000403971 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P19-201ENST00000403971 SPINT1O43278 529 aa9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 BMP2P12643 396 aa9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 CTSOP43234 321 aaPredicted RBP9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 FOXK2Q01167 660 aa9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 FKBP5Q13451 457 aaPredicted RBP9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 MTFR1Q15390 333 aa9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 MRPL14Q6P1L8 145 aaKnown RBP9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 SLC9A9Q8IVB4 645 aa9.02□□□□□ -0.97
HMGB3P19-201ENST00000403971 ATAD2Q6PL18 1390 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 ST8SIA5O15466 376 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 UPP2O95045 317 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 CAPN12Q6ZSI9 719 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 CHMP7Q8WUX9 453 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 MKNK1Q9BUB5 465 aa9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 IQSEC3Q9UPP2 1182 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P19-201ENST00000403971 IGFBP4P22692 258 aa9□□□□□ -0.97
HMGB3P19-201ENST00000403971 KCNA1Q09470 495 aa9□□□□□ -0.97
HMGB3P19-201ENST00000403971 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
HMGB3P19-201ENST00000403971 B4GALNT3Q6L9W6 998 aa9□□□□□ -0.97
HMGB3P19-201ENST00000403971 ZBTB7CA1YPR0 619 aa8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 CDK2AP1O14519 115 aa8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 AXIN1O15169 862 aa8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 PPP1R12BO60237 982 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 CTC1Q2NKJ3 1217 aa8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 ZSCAN10Q96SZ4 725 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 IVNS1ABPQ9Y6Y0 642 aa8.99□□□□□ -0.97
HMGB3P19-201ENST00000403971 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 TAS1R3Q7RTX0 852 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 GRIP2Q9C0E4 1043 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 DACH1Q9UI36 760 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
HMGB3P19-201ENST00000403971 RNF144AP50876 292 aaPredicted RBP8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 SCARF1Q14162 830 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 PPARGC1BQ86YN6 1023 aaKnown RBP8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 ZNF295-AS1Q8N0V1 137 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 C1orf216Q8TAB5 229 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 ZDHHC1Q8WTX9 485 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 SEPT3Q9UH03 358 aa8.97□□□□□ -0.97
HMGB3P19-201ENST00000403971 SERPINB4P48594 390 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 LAPTM4AQ15012 233 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 ZFP42Q96MM3 310 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 IRX2Q9BZI1 471 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 CABP1Q9NZU7 370 aa8.96□□□□□ -0.98
HMGB3P19-201ENST00000403971 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 FOXO3O43524 673 aa8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 GPC1P35052 558 aa8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 PSMA6P60900 246 aaKnown RBP8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms