RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 TOGARAM1Q9Y4F4 1720 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 DCTN1Q14203 1278 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 FAM9BQ8IZU0 186 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
VPREB1-202ENST00000403807 CCNL1Q9UK58 526 aaPredicted RBP18.03■□□□□ 0.48
VPREB1-202ENST00000403807 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
VPREB1-202ENST00000403807 ITGB4P16144 1822 aa18.02■□□□□ 0.48
VPREB1-202ENST00000403807 APAF1O14727 1248 aa18.02■□□□□ 0.48
VPREB1-202ENST00000403807 MIER1Q8N108 512 aa18.02■□□□□ 0.48
VPREB1-202ENST00000403807 LOC102724428A0A0B4J2F2 783 aa18.01■□□□□ 0.47
VPREB1-202ENST00000403807 SIK1P57059 783 aa18.01■□□□□ 0.47
VPREB1-202ENST00000403807 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
VPREB1-202ENST00000403807 LRRC4BQ9NT99 713 aa18.01■□□□□ 0.47
VPREB1-202ENST00000403807 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
VPREB1-202ENST00000403807 BTBD11A6QL63 1104 aa18■□□□□ 0.47
VPREB1-202ENST00000403807 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
VPREB1-202ENST00000403807 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
VPREB1-202ENST00000403807 RGPD3A6NKT7 1758 aaPredicted RBP17.99■□□□□ 0.47
VPREB1-202ENST00000403807 RGPD4Q7Z3J3 1758 aa17.99■□□□□ 0.47
VPREB1-202ENST00000403807 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
VPREB1-202ENST00000403807 KCNQ4P56696 695 aa17.99■□□□□ 0.47
VPREB1-202ENST00000403807 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
VPREB1-202ENST00000403807 PTCD1O75127 700 aaKnown RBP17.98■□□□□ 0.47
VPREB1-202ENST00000403807 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
VPREB1-202ENST00000403807 MRC1P22897 1456 aa17.98■□□□□ 0.47
VPREB1-202ENST00000403807 ADAMTS7Q9UKP4 1686 aa17.98■□□□□ 0.47
VPREB1-202ENST00000403807 ZNF790Q6PG37 636 aa17.97■□□□□ 0.47
VPREB1-202ENST00000403807 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
VPREB1-202ENST00000403807 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
VPREB1-202ENST00000403807 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
VPREB1-202ENST00000403807 RREB1Q92766 1687 aa17.95■□□□□ 0.46
VPREB1-202ENST00000403807 PSDA5PKW4 1024 aaPredicted RBP17.94■□□□□ 0.46
VPREB1-202ENST00000403807 R3HDM1Q15032 1099 aaKnown RBP17.94■□□□□ 0.46
VPREB1-202ENST00000403807 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
VPREB1-202ENST00000403807 VSIG10Q8N0Z9 540 aa17.94■□□□□ 0.46
VPREB1-202ENST00000403807 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
VPREB1-202ENST00000403807 LY75O60449 1722 aa17.94■□□□□ 0.46
VPREB1-202ENST00000403807 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
VPREB1-202ENST00000403807 ITPK1Q13572 414 aa17.93■□□□□ 0.46
VPREB1-202ENST00000403807 AKT1S1Q96B36 256 aa17.93■□□□□ 0.46
VPREB1-202ENST00000403807 FMNL2Q96PY5 1086 aa17.93■□□□□ 0.46
VPREB1-202ENST00000403807 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
VPREB1-202ENST00000403807 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
VPREB1-202ENST00000403807 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
VPREB1-202ENST00000403807 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
VPREB1-202ENST00000403807 KCNQ3O43525 872 aa17.92■□□□□ 0.46
VPREB1-202ENST00000403807 CCDC27Q2M243 656 aa17.92■□□□□ 0.46
VPREB1-202ENST00000403807 TFCP2L1Q9NZI6 479 aa17.92■□□□□ 0.46
VPREB1-202ENST00000403807 NUP188Q5SRE5 1749 aa17.92■□□□□ 0.46
VPREB1-202ENST00000403807 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
VPREB1-202ENST00000403807 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
VPREB1-202ENST00000403807 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
VPREB1-202ENST00000403807 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
VPREB1-202ENST00000403807 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
VPREB1-202ENST00000403807 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
VPREB1-202ENST00000403807 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
VPREB1-202ENST00000403807 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
VPREB1-202ENST00000403807 AK7Q96M32 723 aa17.9■□□□□ 0.46
VPREB1-202ENST00000403807 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
VPREB1-202ENST00000403807 RC3H1Q5TC82 1133 aaKnown RBP17.89■□□□□ 0.45
VPREB1-202ENST00000403807 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.45
VPREB1-202ENST00000403807 SALL2Q9Y467 1007 aaPredicted RBP17.89■□□□□ 0.45
VPREB1-202ENST00000403807 HEG1Q9ULI3 1381 aa17.89■□□□□ 0.45
VPREB1-202ENST00000403807 CHL1O00533 1208 aa17.88■□□□□ 0.45
VPREB1-202ENST00000403807 SNRPA1P09661 255 aaKnown RBP17.88■□□□□ 0.45
VPREB1-202ENST00000403807 WWC1Q8IX03 1113 aa17.88■□□□□ 0.45
VPREB1-202ENST00000403807 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
VPREB1-202ENST00000403807 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
VPREB1-202ENST00000403807 STARD3NLO95772 234 aa17.87■□□□□ 0.45
VPREB1-202ENST00000403807 GNAI1P63096 354 aa17.87■□□□□ 0.45
VPREB1-202ENST00000403807 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
VPREB1-202ENST00000403807 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
VPREB1-202ENST00000403807 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
VPREB1-202ENST00000403807 CNTNAP4Q9C0A0 1308 aa17.86■□□□□ 0.45
VPREB1-202ENST00000403807 GNPATO15228 680 aa17.85■□□□□ 0.45
VPREB1-202ENST00000403807 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
VPREB1-202ENST00000403807 CRKLP46109 303 aaKnown RBP17.85■□□□□ 0.45
VPREB1-202ENST00000403807 PAPPAQ13219 1627 aa17.85■□□□□ 0.45
VPREB1-202ENST00000403807 WDR63Q8IWG1 891 aa17.85■□□□□ 0.45
VPREB1-202ENST00000403807 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
VPREB1-202ENST00000403807 RTCBQ9Y3I0 505 aaKnown RBP17.85■□□□□ 0.45
VPREB1-202ENST00000403807 ZNF831Q5JPB2 1677 aa17.84■□□□□ 0.45
VPREB1-202ENST00000403807 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
VPREB1-202ENST00000403807 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
VPREB1-202ENST00000403807 PNPLA7Q6ZV29 1317 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 MSH5O43196 834 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
VPREB1-202ENST00000403807 SSFA2P28290 1259 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 TRAPPC3LQ5T215 181 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 INTS5Q6P9B9 1019 aaKnown RBP17.83■□□□□ 0.44
VPREB1-202ENST00000403807 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 USP16Q9Y5T5 823 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 C5P01031 1676 aa17.83■□□□□ 0.44
VPREB1-202ENST00000403807 IL16Q14005 1332 aa17.82■□□□□ 0.44
VPREB1-202ENST00000403807 C4BP0C0L5 1744 aa17.82■□□□□ 0.44
VPREB1-202ENST00000403807 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
VPREB1-202ENST00000403807 SLC16A10Q8TF71 515 aa17.82■□□□□ 0.44
VPREB1-202ENST00000403807 MBIPQ9NS73 344 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms