RNA–Protein interactions for RNA: ENST00000402580.7

XRCC6-203, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-203ENST00000402580 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
XRCC6-203ENST00000402580 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
XRCC6-203ENST00000402580 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
XRCC6-203ENST00000402580 ZNF530Q6P9A1 599 aaPredicted RBP13.57□□□□□ -0.24
XRCC6-203ENST00000402580 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
XRCC6-203ENST00000402580 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 AKAP4Q5JQC9 854 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 MPRIPQ6WCQ1 1025 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
XRCC6-203ENST00000402580 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
XRCC6-203ENST00000402580 MRC1P22897 1456 aa13.56□□□□□ -0.24
XRCC6-203ENST00000402580 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
XRCC6-203ENST00000402580 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
XRCC6-203ENST00000402580 FLAD1Q8NFF5 587 aa13.56□□□□□ -0.24
XRCC6-203ENST00000402580 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 UBR3Q6ZT12 1888 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 PTGER2P43116 358 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 BCL11AQ9H165 835 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
XRCC6-203ENST00000402580 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
XRCC6-203ENST00000402580 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
XRCC6-203ENST00000402580 LOC102724428A0A0B4J2F2 783 aa13.52□□□□□ -0.24
XRCC6-203ENST00000402580 SIK1P57059 783 aa13.52□□□□□ -0.24
XRCC6-203ENST00000402580 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.24
XRCC6-203ENST00000402580 CABP4P57796 275 aa13.52□□□□□ -0.25
XRCC6-203ENST00000402580 PDGFDQ9GZP0 370 aaPredicted RBP13.52□□□□□ -0.25
XRCC6-203ENST00000402580 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.25
XRCC6-203ENST00000402580 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
XRCC6-203ENST00000402580 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
XRCC6-203ENST00000402580 HMOX1P09601 288 aa13.51□□□□□ -0.25
XRCC6-203ENST00000402580 RALBP1Q15311 655 aa13.51□□□□□ -0.25
XRCC6-203ENST00000402580 RC3H1Q5TC82 1133 aaKnown RBP13.51□□□□□ -0.25
XRCC6-203ENST00000402580 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
XRCC6-203ENST00000402580 FCHSD2O94868 740 aa13.5□□□□□ -0.25
XRCC6-203ENST00000402580 MTHFSDQ2M296 383 aaKnown RBP13.5□□□□□ -0.25
XRCC6-203ENST00000402580 RNMTO43148 476 aaKnown RBP13.49□□□□□ -0.25
XRCC6-203ENST00000402580 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 PPP1R1BQ9UD71 204 aaPredicted RBP13.49□□□□□ -0.25
XRCC6-203ENST00000402580 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
XRCC6-203ENST00000402580 SSFA2P28290 1259 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 KCNQ4P56696 695 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
XRCC6-203ENST00000402580 TJP1Q07157 1748 aa13.48□□□□□ -0.25
XRCC6-203ENST00000402580 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
XRCC6-203ENST00000402580 PNISRQ8TF01 805 aaKnown RBP13.48□□□□□ -0.25
XRCC6-203ENST00000402580 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
XRCC6-203ENST00000402580 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
XRCC6-203ENST00000402580 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
XRCC6-203ENST00000402580 AK7Q96M32 723 aa13.47□□□□□ -0.25
XRCC6-203ENST00000402580 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
XRCC6-203ENST00000402580 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
XRCC6-203ENST00000402580 ITPK1Q13572 414 aa13.47□□□□□ -0.25
XRCC6-203ENST00000402580 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
XRCC6-203ENST00000402580 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
XRCC6-203ENST00000402580 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
XRCC6-203ENST00000402580 ADRA2BP18089 450 aa13.46□□□□□ -0.25
XRCC6-203ENST00000402580 ARXQ96QS3 562 aa13.46□□□□□ -0.25
XRCC6-203ENST00000402580 POLD1P28340 1107 aa13.46□□□□□ -0.26
XRCC6-203ENST00000402580 CCDC136Q96JN2 1154 aa13.46□□□□□ -0.26
XRCC6-203ENST00000402580 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.26
XRCC6-203ENST00000402580 LGR6Q9HBX8 967 aa13.46□□□□□ -0.26
XRCC6-203ENST00000402580 KCPQ6ZWJ8 1503 aa13.45□□□□□ -0.26
XRCC6-203ENST00000402580 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
XRCC6-203ENST00000402580 PRKAR2BP31323 418 aa13.44□□□□□ -0.26
XRCC6-203ENST00000402580 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
XRCC6-203ENST00000402580 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
XRCC6-203ENST00000402580 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.26
XRCC6-203ENST00000402580 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
XRCC6-203ENST00000402580 MYBBP1AQ9BQG0 1328 aaKnown RBP13.43□□□□□ -0.26
XRCC6-203ENST00000402580 RPS6KA4O75676 772 aa13.43□□□□□ -0.26
XRCC6-203ENST00000402580 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
XRCC6-203ENST00000402580 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
XRCC6-203ENST00000402580 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
XRCC6-203ENST00000402580 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
XRCC6-203ENST00000402580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
XRCC6-203ENST00000402580 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
XRCC6-203ENST00000402580 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
XRCC6-203ENST00000402580 SYT17Q9BSW7 474 aa13.41□□□□□ -0.26
XRCC6-203ENST00000402580 C4AP0C0L4 1744 aa13.41□□□□□ -0.26
XRCC6-203ENST00000402580 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
XRCC6-203ENST00000402580 GNPATO15228 680 aa13.4□□□□□ -0.26
XRCC6-203ENST00000402580 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.26
XRCC6-203ENST00000402580 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
XRCC6-203ENST00000402580 TEFQ10587 303 aa13.4□□□□□ -0.26
XRCC6-203ENST00000402580 PLEKHF1Q96S99 279 aa13.4□□□□□ -0.26
XRCC6-203ENST00000402580 NEFMP07197 916 aa13.39□□□□□ -0.27
XRCC6-203ENST00000402580 TRAPPC3LQ5T215 181 aa13.39□□□□□ -0.27
XRCC6-203ENST00000402580 AMIGO3Q86WK7 504 aa13.39□□□□□ -0.27
XRCC6-203ENST00000402580 TEX13AQ9BXU3 409 aaPredicted RBP13.39□□□□□ -0.27
XRCC6-203ENST00000402580 PTCD1O75127 700 aaKnown RBP13.39□□□□□ -0.27
XRCC6-203ENST00000402580 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
XRCC6-203ENST00000402580 KIF13BQ9NQT8 1826 aa13.38□□□□□ -0.27
XRCC6-203ENST00000402580 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
XRCC6-203ENST00000402580 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms