RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SIK1P57059 783 aa25.55■■□□□ 1.68
RTN4-207ENST00000402434 ZNF827Q17R98 1081 aa25.55■■□□□ 1.68
RTN4-207ENST00000402434 MRC1P22897 1456 aa25.55■■□□□ 1.68
RTN4-207ENST00000402434 IL17REQ8NFR9 667 aa25.54■■□□□ 1.68
RTN4-207ENST00000402434 PNNQ9H307 717 aaKnown RBP25.53■■□□□ 1.68
RTN4-207ENST00000402434 VIRMAQ69YN4 1812 aaKnown RBP25.52■■□□□ 1.68
RTN4-207ENST00000402434 CEMIPQ8WUJ3 1361 aa25.51■■□□□ 1.67
RTN4-207ENST00000402434 NEFMP07197 916 aa25.5■■□□□ 1.67
RTN4-207ENST00000402434 PDGFDQ9GZP0 370 aaPredicted RBP25.5■■□□□ 1.67
RTN4-207ENST00000402434 TAF1LQ8IZX4 1826 aa25.5■■□□□ 1.67
RTN4-207ENST00000402434 SLC4A9Q96Q91 983 aa25.49■■□□□ 1.67
RTN4-207ENST00000402434 C5P01031 1676 aa25.48■■□□□ 1.67
RTN4-207ENST00000402434 HTATSF1O43719 755 aaKnown RBP25.48■■□□□ 1.67
RTN4-207ENST00000402434 ATP6V1AP38606 617 aa25.48■■□□□ 1.67
RTN4-207ENST00000402434 ITPK1Q13572 414 aa25.48■■□□□ 1.67
RTN4-207ENST00000402434 CASZ1Q86V15 1759 aa25.48■■□□□ 1.67
RTN4-207ENST00000402434 TFCP2L1Q9NZI6 479 aa25.47■■□□□ 1.67
RTN4-207ENST00000402434 ZNF831Q5JPB2 1677 aa25.47■■□□□ 1.67
RTN4-207ENST00000402434 ANP32CO43423 234 aa25.47■■□□□ 1.67
RTN4-207ENST00000402434 TEFQ10587 303 aa25.47■■□□□ 1.67
RTN4-207ENST00000402434 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
RTN4-207ENST00000402434 WDR43Q15061 677 aaKnown RBP eCLIP25.46■■□□□ 1.67
RTN4-207ENST00000402434 RTF1Q92541 710 aaKnown RBP25.46■■□□□ 1.67
RTN4-207ENST00000402434 LRP5O75197 1615 aa25.45■■□□□ 1.67
RTN4-207ENST00000402434 PNPLA7Q6ZV29 1317 aa25.45■■□□□ 1.67
RTN4-207ENST00000402434 PTCD1O75127 700 aaKnown RBP25.45■■□□□ 1.66
RTN4-207ENST00000402434 NFE2L2Q16236 605 aa25.45■■□□□ 1.66
RTN4-207ENST00000402434 LINC00116Q8NCU8 138 aa25.45■■□□□ 1.66
RTN4-207ENST00000402434 QSER1Q2KHR3 1735 aa25.44■■□□□ 1.66
RTN4-207ENST00000402434 ADAMTS8Q9UP79 889 aa25.44■■□□□ 1.66
RTN4-207ENST00000402434 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
RTN4-207ENST00000402434 C4BP0C0L5 1744 aa25.44■■□□□ 1.66
RTN4-207ENST00000402434 SLC39A6Q13433 755 aa25.43■■□□□ 1.66
RTN4-207ENST00000402434 MCM10Q7L590 875 aa25.42■■□□□ 1.66
RTN4-207ENST00000402434 SIPA1L3O60292 1781 aaPredicted RBP25.41■■□□□ 1.66
RTN4-207ENST00000402434 SPON1Q9HCB6 807 aa25.41■■□□□ 1.66
RTN4-207ENST00000402434 TUBGCP6Q96RT7 1819 aa25.41■■□□□ 1.66
RTN4-207ENST00000402434 DCTN1Q14203 1278 aa25.4■■□□□ 1.66
RTN4-207ENST00000402434 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
RTN4-207ENST00000402434 SLC16A10Q8TF71 515 aa25.4■■□□□ 1.66
RTN4-207ENST00000402434 AK7Q96M32 723 aa25.4■■□□□ 1.66
RTN4-207ENST00000402434 MTFR1LQ9H019 292 aa25.4■■□□□ 1.66
RTN4-207ENST00000402434 DLG5Q8TDM6 1919 aa25.39■■□□□ 1.66
RTN4-207ENST00000402434 ZBTB7AO95365 584 aa25.39■■□□□ 1.65
RTN4-207ENST00000402434 ZNF790Q6PG37 636 aa25.39■■□□□ 1.65
RTN4-207ENST00000402434 FLAD1Q8NFF5 587 aa25.39■■□□□ 1.65
RTN4-207ENST00000402434 RUNDC1Q96C34 613 aa25.39■■□□□ 1.65
RTN4-207ENST00000402434 KCPQ6ZWJ8 1503 aa25.38■■□□□ 1.65
RTN4-207ENST00000402434 CICQ96RK0 1608 aaPredicted RBP25.38■■□□□ 1.65
RTN4-207ENST00000402434 RC3H1Q5TC82 1133 aaKnown RBP25.38■■□□□ 1.65
RTN4-207ENST00000402434 COL23A1Q86Y22 540 aaPredicted RBP25.38■■□□□ 1.65
RTN4-207ENST00000402434 TMPOP42166 694 aaKnown RBP25.37■■□□□ 1.65
RTN4-207ENST00000402434 AMIGO3Q86WK7 504 aa25.37■■□□□ 1.65
RTN4-207ENST00000402434 VSIG10Q8N0Z9 540 aa25.37■■□□□ 1.65
RTN4-207ENST00000402434 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 TTC5Q8N0Z6 440 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 CNTNAP4Q9C0A0 1308 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 COL5A3P25940 1745 aaPredicted RBP25.36■■□□□ 1.65
RTN4-207ENST00000402434 UBR2Q8IWV8 1755 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 UBR3Q6ZT12 1888 aa25.36■■□□□ 1.65
RTN4-207ENST00000402434 PTGER2P43116 358 aa25.35■■□□□ 1.65
RTN4-207ENST00000402434 SSFA2P28290 1259 aa25.34■■□□□ 1.65
RTN4-207ENST00000402434 RIPK4P57078 832 aa25.34■■□□□ 1.65
RTN4-207ENST00000402434 ATF5Q9Y2D1 282 aaPredicted RBP25.34■■□□□ 1.65
RTN4-207ENST00000402434 GNPATO15228 680 aa25.34■■□□□ 1.65
RTN4-207ENST00000402434 TAF7Q15545 349 aaPredicted RBP25.34■■□□□ 1.65
RTN4-207ENST00000402434 ZNF496Q96IT1 587 aaPredicted RBP25.34■■□□□ 1.65
RTN4-207ENST00000402434 TJP1Q07157 1748 aa25.33■■□□□ 1.65
RTN4-207ENST00000402434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.33■■□□□ 1.65
RTN4-207ENST00000402434 DNAJC10Q8IXB1 793 aa25.33■■□□□ 1.65
RTN4-207ENST00000402434 SGIP1Q9BQI5 828 aa25.33■■□□□ 1.65
RTN4-207ENST00000402434 MYH14Q7Z406 1995 aaKnown RBP25.32■■□□□ 1.64
RTN4-207ENST00000402434 CRKLP46109 303 aaKnown RBP25.32■■□□□ 1.64
RTN4-207ENST00000402434 PNISRQ8TF01 805 aaKnown RBP25.32■■□□□ 1.64
RTN4-207ENST00000402434 KCNQ3O43525 872 aa25.31■■□□□ 1.64
RTN4-207ENST00000402434 RPS6KA4O75676 772 aa25.31■■□□□ 1.64
RTN4-207ENST00000402434 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
RTN4-207ENST00000402434 RTCBQ9Y3I0 505 aaKnown RBP25.31■■□□□ 1.64
RTN4-207ENST00000402434 MSH5O43196 834 aa25.3■■□□□ 1.64
RTN4-207ENST00000402434 CYP19A1P11511 503 aaPredicted RBP25.3■■□□□ 1.64
RTN4-207ENST00000402434 LMOD3Q0VAK6 560 aa25.3■■□□□ 1.64
RTN4-207ENST00000402434 SMIM5Q71RC9 77 aa25.3■■□□□ 1.64
RTN4-207ENST00000402434 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
RTN4-207ENST00000402434 THUMPD2Q9BTF0 503 aaKnown RBP25.3■■□□□ 1.64
RTN4-207ENST00000402434 HEG1Q9ULI3 1381 aa25.3■■□□□ 1.64
RTN4-207ENST00000402434 PHF14O94880 888 aa25.29■■□□□ 1.64
RTN4-207ENST00000402434 INTS5Q6P9B9 1019 aaKnown RBP25.29■■□□□ 1.64
RTN4-207ENST00000402434 RRP7AQ9Y3A4 280 aaKnown RBP25.28■■□□□ 1.64
RTN4-207ENST00000402434 ADRA2BP18089 450 aa25.28■■□□□ 1.64
RTN4-207ENST00000402434 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
RTN4-207ENST00000402434 TEX13AQ9BXU3 409 aaPredicted RBP25.28■■□□□ 1.64
RTN4-207ENST00000402434 TRAPPC3LQ5T215 181 aa25.27■■□□□ 1.64
RTN4-207ENST00000402434 CCDC87Q9NVE4 849 aa25.27■■□□□ 1.64
RTN4-207ENST00000402434 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
RTN4-207ENST00000402434 MIS18AQ9NYP9 233 aa25.26■■□□□ 1.63
RTN4-207ENST00000402434 TRIM35Q9UPQ4 493 aa25.26■■□□□ 1.63
RTN4-207ENST00000402434 STARD3NLO95772 234 aa25.24■■□□□ 1.63
RTN4-207ENST00000402434 ARHGEF1Q92888 912 aaKnown RBP25.24■■□□□ 1.63
RTN4-207ENST00000402434 PPP1R1BQ9UD71 204 aaPredicted RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms