RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 SF3A1Q15459 793 aaKnown RBP22.37■■□□□ 1.17
GAREM2-201ENST00000401533 PANK2Q9BZ23 570 aa22.37■■□□□ 1.17
GAREM2-201ENST00000401533 SPG7Q9UQ90 795 aa22.37■■□□□ 1.17
GAREM2-201ENST00000401533 PTCD1O75127 700 aaKnown RBP22.36■■□□□ 1.17
GAREM2-201ENST00000401533 PPP1R42Q7Z4L9 355 aa22.36■■□□□ 1.17
GAREM2-201ENST00000401533 CCDC8Q9H0W5 538 aaPredicted RBP22.36■■□□□ 1.17
GAREM2-201ENST00000401533 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
GAREM2-201ENST00000401533 KCNA6P17658 529 aa22.36■■□□□ 1.17
GAREM2-201ENST00000401533 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
GAREM2-201ENST00000401533 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
GAREM2-201ENST00000401533 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
GAREM2-201ENST00000401533 CIZ1Q9ULV3 898 aaPredicted RBP22.35■■□□□ 1.17
GAREM2-201ENST00000401533 PLEKHF1Q96S99 279 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 BOLA2Q9H3K6 86 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 PTPRCP08575 1304 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 FAM43AQ8N2R8 423 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 DNAAF4Q8WXU2 420 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 GLI2P10070 1586 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 CEBPZQ03701 1054 aaKnown RBP22.34■■□□□ 1.17
GAREM2-201ENST00000401533 CSPP1Q1MSJ5 1256 aa22.34■■□□□ 1.17
GAREM2-201ENST00000401533 JAKMIP1Q96N16 626 aaKnown RBP22.34■■□□□ 1.17
GAREM2-201ENST00000401533 CHAF1AQ13111 956 aaPredicted RBP22.33■■□□□ 1.17
GAREM2-201ENST00000401533 CEP85Q6P2H3 762 aa22.33■■□□□ 1.17
GAREM2-201ENST00000401533 BCL11BQ9C0K0 894 aaPredicted RBP22.33■■□□□ 1.17
GAREM2-201ENST00000401533 DTNBO60941 627 aa22.33■■□□□ 1.17
GAREM2-201ENST00000401533 PLEKHM2Q8IWE5 1019 aa22.33■■□□□ 1.17
GAREM2-201ENST00000401533 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.16
GAREM2-201ENST00000401533 GTF2E1P29083 439 aaPredicted RBP22.33■■□□□ 1.16
GAREM2-201ENST00000401533 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 NEXMIFQ5QGS0 1516 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 CABP4P57796 275 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 CHRNA2Q15822 529 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 TOM1L2Q6ZVM7 507 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 FERMT3Q86UX7 667 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 PPLO60437 1756 aa22.32■■□□□ 1.16
GAREM2-201ENST00000401533 PHAXQ9H814 394 aaKnown RBP22.32■■□□□ 1.16
GAREM2-201ENST00000401533 LTKP29376 864 aa22.31■■□□□ 1.16
GAREM2-201ENST00000401533 PDE1AP54750 535 aa22.31■■□□□ 1.16
GAREM2-201ENST00000401533 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
GAREM2-201ENST00000401533 DCTPP1Q9H773 170 aa22.31■■□□□ 1.16
GAREM2-201ENST00000401533 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
GAREM2-201ENST00000401533 TULP1O00294 542 aaPredicted RBP22.31■■□□□ 1.16
GAREM2-201ENST00000401533 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
GAREM2-201ENST00000401533 IFT172Q9UG01 1749 aa22.3■■□□□ 1.16
GAREM2-201ENST00000401533 SYCE3A1L190 88 aa22.3■■□□□ 1.16
GAREM2-201ENST00000401533 CWC22Q9HCG8 908 aaKnown RBP22.3■■□□□ 1.16
GAREM2-201ENST00000401533 CASTP20810 708 aaKnown RBP22.29■■□□□ 1.16
GAREM2-201ENST00000401533 PRPF40BQ6NWY9 871 aaKnown RBP22.29■■□□□ 1.16
GAREM2-201ENST00000401533 PRDM11Q9NQV5 511 aa22.29■■□□□ 1.16
GAREM2-201ENST00000401533 TSPOAP1O95153 1857 aa22.29■■□□□ 1.16
GAREM2-201ENST00000401533 ZFYVE9O95405 1425 aa22.29■■□□□ 1.16
GAREM2-201ENST00000401533 MCM2P49736 904 aa22.29■■□□□ 1.16
GAREM2-201ENST00000401533 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
GAREM2-201ENST00000401533 MAP3K2Q9Y2U5 619 aa22.28■■□□□ 1.16
GAREM2-201ENST00000401533 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
GAREM2-201ENST00000401533 TULP4Q9NRJ4 1543 aa22.28■■□□□ 1.16
GAREM2-201ENST00000401533 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
GAREM2-201ENST00000401533 MYD88Q99836 296 aa22.27■■□□□ 1.16
GAREM2-201ENST00000401533 ATP5J2-PTCD1G3V325 749 aa22.27■■□□□ 1.16
GAREM2-201ENST00000401533 RBM27Q9P2N5 1060 aaKnown RBP22.27■■□□□ 1.16
GAREM2-201ENST00000401533 BAG4O95429 457 aaKnown RBP22.27■■□□□ 1.15
GAREM2-201ENST00000401533 CCDC83Q8IWF9 413 aa22.27■■□□□ 1.15
GAREM2-201ENST00000401533 PPFIA3O75145 1194 aa22.26■■□□□ 1.15
GAREM2-201ENST00000401533 METP08581 1390 aa22.26■■□□□ 1.15
GAREM2-201ENST00000401533 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
GAREM2-201ENST00000401533 ISY1Q9ULR0 285 aaKnown RBP22.26■■□□□ 1.15
GAREM2-201ENST00000401533 PA2G4Q9UQ80 394 aaKnown RBP22.26■■□□□ 1.15
GAREM2-201ENST00000401533 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
GAREM2-201ENST00000401533 CABLES1Q8TDN4 633 aa22.25■■□□□ 1.15
GAREM2-201ENST00000401533 XRCC6P12956 609 aaKnown RBP eCLIP22.25■■□□□ 1.15
GAREM2-201ENST00000401533 PIK3C2BO00750 1634 aa22.25■■□□□ 1.15
GAREM2-201ENST00000401533 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
GAREM2-201ENST00000401533 CPLX1O14810 134 aa22.25■■□□□ 1.15
GAREM2-201ENST00000401533 TCEANC2Q96MN5 208 aa22.25■■□□□ 1.15
GAREM2-201ENST00000401533 FAM13BQ9NYF5 915 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
GAREM2-201ENST00000401533 R3HCC1Q9Y3T6 440 aaKnown RBP22.24■■□□□ 1.15
GAREM2-201ENST00000401533 GOLGA6L6A8MZA4 724 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 CHL1O00533 1208 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 HSP90AA2PQ14568 343 aaPredicted RBP22.24■■□□□ 1.15
GAREM2-201ENST00000401533 ERC1Q8IUD2 1116 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 MBD3O95983 291 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 ANKRD24Q8TF21 1146 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 MSH6P52701 1360 aa22.24■■□□□ 1.15
GAREM2-201ENST00000401533 RICTORQ6R327 1708 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 BECN2A8MW95 431 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 ESPNB1AK53 854 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 KRT28Q7Z3Y7 464 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 RHPN1Q8TCX5 695 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 PDRG1Q9NUG6 133 aa22.23■■□□□ 1.15
GAREM2-201ENST00000401533 GLRX3O76003 335 aaKnown RBP22.22■■□□□ 1.15
GAREM2-201ENST00000401533 FKBP4Q02790 459 aaKnown RBP eCLIP22.22■■□□□ 1.15
GAREM2-201ENST00000401533 STK11IPQ8N1F8 1099 aa22.22■■□□□ 1.15
GAREM2-201ENST00000401533 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
GAREM2-201ENST00000401533 LARP1BQ659C4 914 aaKnown RBP22.22■■□□□ 1.15
GAREM2-201ENST00000401533 CWF19L2Q2TBE0 894 aaKnown RBP22.22■■□□□ 1.15
GAREM2-201ENST00000401533 DDX11Q96FC9 970 aa22.22■■□□□ 1.15
GAREM2-201ENST00000401533 LGR6Q9HBX8 967 aa22.21■■□□□ 1.15
GAREM2-201ENST00000401533 CREBRFQ8IUR6 639 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 671 ms