RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 CETN1Q12798 172 aa9.65□□□□□ -0.86
KDM5A-201ENST00000399788 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
KDM5A-201ENST00000399788 ST5P78524 1137 aa9.65□□□□□ -0.86
KDM5A-201ENST00000399788 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
KDM5A-201ENST00000399788 CACNA2D4Q7Z3S7 1137 aa9.65□□□□□ -0.86
KDM5A-201ENST00000399788 CCDC196A0A1B0GTZ2 297 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 NOP2P46087 812 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 DDX46Q7L014 1031 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 UTP14AQ9BVJ6 771 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 HLA-DOAP06340 250 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 CKAP2LQ8IYA6 745 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 DYDC1Q8WWB3 177 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 BEGAINQ9BUH8 593 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 INCENPQ9NQS7 918 aa9.65□□□□□ -0.87
KDM5A-201ENST00000399788 NOB1Q9ULX3 412 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 FGFR1OPO95684 399 aaKnown RBP9.65□□□□□ -0.87
KDM5A-201ENST00000399788 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 CWC27Q6UX04 472 aaKnown RBP9.64□□□□□ -0.87
KDM5A-201ENST00000399788 PPM1EQ8WY54 764 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 FKBP15Q5T1M5 1219 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC113Q9H0I3 377 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 PUF60Q9UHX1 559 aaKnown RBP9.64□□□□□ -0.87
KDM5A-201ENST00000399788 U3KPZ7 1027 aaPredicted RBP9.64□□□□□ -0.87
KDM5A-201ENST00000399788 GNAT3A8MTJ3 354 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 LRRC45Q96CN5 670 aa9.64□□□□□ -0.87
KDM5A-201ENST00000399788 ERLIN1O75477 346 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 POLD1P28340 1107 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 SPA17Q15506 151 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 TAF12Q16514 161 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 SYCP3Q8IZU3 236 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 HDAC9Q9UKV0 1011 aa9.63□□□□□ -0.87
KDM5A-201ENST00000399788 RRS1Q15050 365 aaKnown RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 EIF3JO75822 258 aaKnown RBP9.63□□□□□ -0.87
KDM5A-201ENST00000399788 KIF20AO95235 890 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 BAG3O95817 575 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 LDHCP07864 332 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 GAPVD1Q14C86 1478 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 PDRG1Q9NUG6 133 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 BICD1Q96G01 975 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 SPATA32Q96LK8 384 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 ZMYND15Q9H091 742 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 WDR33Q9C0J8 1336 aaKnown RBP9.62□□□□□ -0.87
KDM5A-201ENST00000399788 LMAN1P49257 510 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 BCAR3O75815 825 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 TSNARE1Q96NA8 513 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 NBPF8Q3BBV2 869 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 CDC5LQ99459 802 aaKnown RBP9.62□□□□□ -0.87
KDM5A-201ENST00000399788 DDX23Q9BUQ8 820 aaKnown RBP9.62□□□□□ -0.87
KDM5A-201ENST00000399788 SMTNL1A8MU46 457 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 USP8P40818 1118 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 FERP16591 822 aa9.62□□□□□ -0.87
KDM5A-201ENST00000399788 NCBP1Q09161 790 aaKnown RBP9.62□□□□□ -0.87
KDM5A-201ENST00000399788 ANKRD18BA2A2Z9 1011 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 ARL1P40616 181 aaPredicted RBP9.61□□□□□ -0.87
KDM5A-201ENST00000399788 NLRP5P59047 1200 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC148Q8NFR7 591 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 MYD88Q99836 296 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 VAT1LQ9HCJ6 419 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 ARHGAP29Q52LW3 1261 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC194A0A1B0GVG4 234 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 A0A087WZG4 1122 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 IL1RAPL2Q9NP60 686 aa9.61□□□□□ -0.87
KDM5A-201ENST00000399788 CATIPQ7Z7H3 387 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 RNF41Q9H4P4 317 aaPredicted RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 TSR2Q969E8 191 aaKnown RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 ADAMTS8Q9UP79 889 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 TOM1O60784 492 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 TNNT1P13805 278 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 GPTP24298 496 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC178Q5BJE1 867 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 KLHL10Q6JEL2 608 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 DDX11Q96FC9 970 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 PHAXQ9H814 394 aaKnown RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC174Q6PII3 467 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 SYNCQ9H7C4 482 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 PLS1Q14651 629 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 B4DLN1 442 aa9.6□□□□□ -0.87
KDM5A-201ENST00000399788 MRPL12P52815 198 aaKnown RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 CCDC12Q8WUD4 166 aaPredicted RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 ZNF644Q9H582 1327 aaPredicted RBP9.6□□□□□ -0.87
KDM5A-201ENST00000399788 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms