RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 RTF1Q92541 710 aaKnown RBP24■■□□□ 1.43
SBF1-203ENST00000399627 SMARCC1Q92922 1105 aaPredicted RBP24■■□□□ 1.43
SBF1-203ENST00000399627 ATG3Q9NT62 314 aa24■■□□□ 1.43
SBF1-203ENST00000399627 SIPA1L3O60292 1781 aaPredicted RBP24■■□□□ 1.43
SBF1-203ENST00000399627 HTATSF1O43719 755 aaKnown RBP23.99■■□□□ 1.43
SBF1-203ENST00000399627 TMPOP42166 694 aaKnown RBP23.99■■□□□ 1.43
SBF1-203ENST00000399627 MCM10Q7L590 875 aa23.99■■□□□ 1.43
SBF1-203ENST00000399627 CEMIPQ8WUJ3 1361 aa23.99■■□□□ 1.43
SBF1-203ENST00000399627 DCTN1Q14203 1278 aa23.98■■□□□ 1.43
SBF1-203ENST00000399627 KCNQ4P56696 695 aa23.97■■□□□ 1.43
SBF1-203ENST00000399627 RIPK4P57078 832 aa23.97■■□□□ 1.43
SBF1-203ENST00000399627 TEFQ10587 303 aa23.97■■□□□ 1.43
SBF1-203ENST00000399627 LRRC4BQ9NT99 713 aa23.97■■□□□ 1.43
SBF1-203ENST00000399627 RRP7AQ9Y3A4 280 aaKnown RBP23.97■■□□□ 1.43
SBF1-203ENST00000399627 SLC27A3Q5K4L6 730 aa23.96■■□□□ 1.43
SBF1-203ENST00000399627 CCNL1Q9UK58 526 aaPredicted RBP23.96■■□□□ 1.43
SBF1-203ENST00000399627 NEUROD2Q15784 382 aa23.95■■□□□ 1.42
SBF1-203ENST00000399627 PAPPAQ13219 1627 aa23.94■■□□□ 1.42
SBF1-203ENST00000399627 TAF1LQ8IZX4 1826 aa23.94■■□□□ 1.42
SBF1-203ENST00000399627 CCER2I3L3R5 266 aa23.93■■□□□ 1.42
SBF1-203ENST00000399627 APAF1O14727 1248 aa23.93■■□□□ 1.42
SBF1-203ENST00000399627 SLC39A6Q13433 755 aa23.93■■□□□ 1.42
SBF1-203ENST00000399627 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
SBF1-203ENST00000399627 MIER1Q8N108 512 aa23.93■■□□□ 1.42
SBF1-203ENST00000399627 THUMPD2Q9BTF0 503 aaKnown RBP23.93■■□□□ 1.42
SBF1-203ENST00000399627 LOC102724428A0A0B4J2F2 783 aa23.92■■□□□ 1.42
SBF1-203ENST00000399627 SIK1P57059 783 aa23.92■■□□□ 1.42
SBF1-203ENST00000399627 NBPF14Q5TI25 921 aa23.91■■□□□ 1.42
SBF1-203ENST00000399627 RBM42Q9BTD8 480 aaKnown RBP23.91■■□□□ 1.42
SBF1-203ENST00000399627 ANO8Q9HCE9 1232 aaPredicted RBP23.91■■□□□ 1.42
SBF1-203ENST00000399627 C5P01031 1676 aa23.91■■□□□ 1.42
SBF1-203ENST00000399627 LMOD3Q0VAK6 560 aa23.9■■□□□ 1.42
SBF1-203ENST00000399627 PTCD1O75127 700 aaKnown RBP23.89■■□□□ 1.41
SBF1-203ENST00000399627 SLC4A9Q96Q91 983 aa23.89■■□□□ 1.41
SBF1-203ENST00000399627 UBR2Q8IWV8 1755 aa23.88■■□□□ 1.41
SBF1-203ENST00000399627 ATP6V1AP38606 617 aa23.88■■□□□ 1.41
SBF1-203ENST00000399627 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
SBF1-203ENST00000399627 ZNF831Q5JPB2 1677 aa23.88■■□□□ 1.41
SBF1-203ENST00000399627 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
SBF1-203ENST00000399627 ITPK1Q13572 414 aa23.87■■□□□ 1.41
SBF1-203ENST00000399627 STK32BQ9NY57 414 aa23.87■■□□□ 1.41
SBF1-203ENST00000399627 KCPQ6ZWJ8 1503 aa23.87■■□□□ 1.41
SBF1-203ENST00000399627 SENP3-EIF4A1A0A087X0R7 540 aa23.86■■□□□ 1.41
SBF1-203ENST00000399627 PSDA5PKW4 1024 aaPredicted RBP23.86■■□□□ 1.41
SBF1-203ENST00000399627 R3HDM1Q15032 1099 aaKnown RBP23.86■■□□□ 1.41
SBF1-203ENST00000399627 TAF7Q15545 349 aaPredicted RBP23.86■■□□□ 1.41
SBF1-203ENST00000399627 TTC5Q8N0Z6 440 aa23.86■■□□□ 1.41
SBF1-203ENST00000399627 KCNQ3O43525 872 aa23.85■■□□□ 1.41
SBF1-203ENST00000399627 ZNF827Q17R98 1081 aa23.85■■□□□ 1.41
SBF1-203ENST00000399627 ZNF790Q6PG37 636 aa23.85■■□□□ 1.41
SBF1-203ENST00000399627 TJP1Q07157 1748 aa23.84■■□□□ 1.41
SBF1-203ENST00000399627 SLC15A2Q16348 729 aa23.84■■□□□ 1.41
SBF1-203ENST00000399627 AKT1S1Q96B36 256 aa23.84■■□□□ 1.41
SBF1-203ENST00000399627 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
SBF1-203ENST00000399627 KDM3BQ7LBC6 1761 aa23.83■■□□□ 1.41
SBF1-203ENST00000399627 LINC00116Q8NCU8 138 aa23.83■■□□□ 1.41
SBF1-203ENST00000399627 MIS18AQ9NYP9 233 aa23.83■■□□□ 1.41
SBF1-203ENST00000399627 C4BP0C0L5 1744 aa23.83■■□□□ 1.41
SBF1-203ENST00000399627 COL5A3P25940 1745 aaPredicted RBP23.83■■□□□ 1.41
SBF1-203ENST00000399627 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
SBF1-203ENST00000399627 CICQ96RK0 1608 aaPredicted RBP23.81■■□□□ 1.4
SBF1-203ENST00000399627 HMGB2P26583 209 aaKnown RBP23.81■■□□□ 1.4
SBF1-203ENST00000399627 MYH14Q7Z406 1995 aaKnown RBP23.8■■□□□ 1.4
SBF1-203ENST00000399627 DNAJC10Q8IXB1 793 aa23.79■■□□□ 1.4
SBF1-203ENST00000399627 FMNL2Q96PY5 1086 aa23.79■■□□□ 1.4
SBF1-203ENST00000399627 QSER1Q2KHR3 1735 aa23.79■■□□□ 1.4
SBF1-203ENST00000399627 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
SBF1-203ENST00000399627 UBR3Q6ZT12 1888 aa23.78■■□□□ 1.4
SBF1-203ENST00000399627 HEG1Q9ULI3 1381 aa23.78■■□□□ 1.4
SBF1-203ENST00000399627 AK7Q96M32 723 aa23.77■■□□□ 1.4
SBF1-203ENST00000399627 TFCP2L1Q9NZI6 479 aa23.77■■□□□ 1.4
SBF1-203ENST00000399627 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
SBF1-203ENST00000399627 SALL2Q9Y467 1007 aaPredicted RBP23.76■■□□□ 1.39
SBF1-203ENST00000399627 CCDC27Q2M243 656 aa23.75■■□□□ 1.39
SBF1-203ENST00000399627 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
SBF1-203ENST00000399627 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
SBF1-203ENST00000399627 NCBP3Q53F19 620 aaKnown RBP23.74■■□□□ 1.39
SBF1-203ENST00000399627 PDGFDQ9GZP0 370 aaPredicted RBP23.74■■□□□ 1.39
SBF1-203ENST00000399627 BABAM1Q9NWV8 329 aa23.74■■□□□ 1.39
SBF1-203ENST00000399627 CNTNAP4Q9C0A0 1308 aa23.74■■□□□ 1.39
SBF1-203ENST00000399627 CHL1O00533 1208 aa23.73■■□□□ 1.39
SBF1-203ENST00000399627 CRKLP46109 303 aaKnown RBP23.73■■□□□ 1.39
SBF1-203ENST00000399627 RC3H1Q5TC82 1133 aaKnown RBP23.73■■□□□ 1.39
SBF1-203ENST00000399627 WWC1Q8IX03 1113 aa23.73■■□□□ 1.39
SBF1-203ENST00000399627 PNPLA7Q6ZV29 1317 aa23.73■■□□□ 1.39
SBF1-203ENST00000399627 GNPATO15228 680 aa23.72■■□□□ 1.39
SBF1-203ENST00000399627 CYP19A1P11511 503 aaPredicted RBP23.72■■□□□ 1.39
SBF1-203ENST00000399627 EIF4A1P60842 406 aaKnown RBP23.72■■□□□ 1.39
SBF1-203ENST00000399627 CALD1Q05682 793 aaKnown RBP23.72■■□□□ 1.39
SBF1-203ENST00000399627 SMIM5Q71RC9 77 aa23.72■■□□□ 1.39
SBF1-203ENST00000399627 AMIGO3Q86WK7 504 aa23.72■■□□□ 1.39
SBF1-203ENST00000399627 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SBF1-203ENST00000399627 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
SBF1-203ENST00000399627 TEX13AQ9BXU3 409 aaPredicted RBP23.71■■□□□ 1.39
SBF1-203ENST00000399627 SNRPA1P09661 255 aaKnown RBP23.7■■□□□ 1.38
SBF1-203ENST00000399627 PHF14O94880 888 aa23.69■■□□□ 1.38
SBF1-203ENST00000399627 STARD3NLO95772 234 aa23.69■■□□□ 1.38
SBF1-203ENST00000399627 ZNF853P0CG23 659 aa23.69■■□□□ 1.38
SBF1-203ENST00000399627 INTS5Q6P9B9 1019 aaKnown RBP23.69■■□□□ 1.38
SBF1-203ENST00000399627 COL23A1Q86Y22 540 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms