RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 MYO6Q9UM54 1294 aa15.45■□□□□ 0.06
ITSN1-208ENST00000399349 CCDC66A2RUB6 948 aa15.45■□□□□ 0.06
ITSN1-208ENST00000399349 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
ITSN1-208ENST00000399349 TIAM1Q13009 1591 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 CKAP2LQ8IYA6 745 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 RPGRIP1LQ68CZ1 1315 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 FBLN1P23142 703 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 ZSCAN30Q86W11 494 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 CBFA2T2O43439 604 aa15.44■□□□□ 0.06
ITSN1-208ENST00000399349 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
ITSN1-208ENST00000399349 FOXO3O43524 673 aa15.43■□□□□ 0.06
ITSN1-208ENST00000399349 IGHMBP2P38935 993 aaKnown RBP15.43■□□□□ 0.06
ITSN1-208ENST00000399349 IFIT1P09914 478 aaKnown RBP15.43■□□□□ 0.06
ITSN1-208ENST00000399349 ADGRF5Q8IZF2 1346 aa15.43■□□□□ 0.06
ITSN1-208ENST00000399349 TAX1BP1Q86VP1 789 aa15.43■□□□□ 0.06
ITSN1-208ENST00000399349 RDXP35241 583 aaKnown RBP15.43■□□□□ 0.06
ITSN1-208ENST00000399349 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
ITSN1-208ENST00000399349 ARHGAP29Q52LW3 1261 aa15.42■□□□□ 0.06
ITSN1-208ENST00000399349 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 TNPO1Q92973 898 aaKnown RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 TFIP11Q9UBB9 837 aaKnown RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 FAM83GA6ND36 823 aa15.42■□□□□ 0.06
ITSN1-208ENST00000399349 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
ITSN1-208ENST00000399349 LARP1Q6PKG0 1096 aaKnown RBP15.41■□□□□ 0.06
ITSN1-208ENST00000399349 GOLGA6L10A6NI86 522 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
ITSN1-208ENST00000399349 PANK2Q9BZ23 570 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 USP25Q9UHP3 1055 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 PLEKHH2Q8IVE3 1493 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 CLCN1P35523 988 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 ANKRD62A6NC57 917 aa15.41■□□□□ 0.06
ITSN1-208ENST00000399349 ERICH4A6NGS2 130 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 UBXN4Q92575 508 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 PLCD4Q9BRC7 762 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 STARD3NLO95772 234 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 TAF3Q5VWG9 929 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 CCDC102AQ96A19 550 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 ANXA1P04083 346 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 XRCC6P12956 609 aaKnown RBP eCLIP15.4■□□□□ 0.06
ITSN1-208ENST00000399349 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
ITSN1-208ENST00000399349 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
ITSN1-208ENST00000399349 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 IGHDP01880 384 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 ZNF76P36508 570 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 DNAAF4Q8WXU2 420 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 NAPBQ9H115 298 aa15.4■□□□□ 0.06
ITSN1-208ENST00000399349 ERLIN1O75477 346 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 ERLIN2O94905 339 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 NKTRP30414 1462 aaKnown RBP15.39■□□□□ 0.05
ITSN1-208ENST00000399349 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
ITSN1-208ENST00000399349 SMTNL1A8MU46 457 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 JARID2Q92833 1246 aaPredicted RBP15.39■□□□□ 0.05
ITSN1-208ENST00000399349 C8orf76Q96K31 380 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 SNRKQ9NRH2 765 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 RAB11FIP4Q86YS3 637 aa15.39■□□□□ 0.05
ITSN1-208ENST00000399349 MPHOSPH10O00566 681 aaKnown RBP15.38■□□□□ 0.05
ITSN1-208ENST00000399349 FLIIQ13045 1269 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 A0A087WZG4 1122 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 ZHX1Q9UKY1 873 aaPredicted RBP15.38■□□□□ 0.05
ITSN1-208ENST00000399349 GPTP24298 496 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 ENOX2Q16206 610 aaKnown RBP15.38■□□□□ 0.05
ITSN1-208ENST00000399349 TBC1D9Q6ZT07 1266 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 SNAPC4Q5SXM2 1469 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 BIN1O00499 593 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 RANBP6O60518 1105 aaKnown RBP15.38■□□□□ 0.05
ITSN1-208ENST00000399349 WASF1Q92558 559 aa15.38■□□□□ 0.05
ITSN1-208ENST00000399349 SCAND2PQ9GZW5 306 aaPredicted RBP15.38■□□□□ 0.05
ITSN1-208ENST00000399349 DNA2P51530 1060 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 PDCL2Q8N4E4 241 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 TRMT1Q9NXH9 659 aaKnown RBP15.37■□□□□ 0.05
ITSN1-208ENST00000399349 WWC2Q6AWC2 1192 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 IBSPP21815 317 aaPredicted RBP15.37■□□□□ 0.05
ITSN1-208ENST00000399349 PTPN14Q15678 1187 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 CPLX3Q8WVH0 158 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 LIMCH1Q9UPQ0 1083 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
ITSN1-208ENST00000399349 ATP5J2-PTCD1G3V325 749 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
ITSN1-208ENST00000399349 CCDC183Q5T5S1 534 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
ITSN1-208ENST00000399349 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 TMOD3Q9NYL9 352 aa15.37■□□□□ 0.05
ITSN1-208ENST00000399349 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 IFIT5Q13325 482 aaKnown RBP15.36■□□□□ 0.05
ITSN1-208ENST00000399349 IDI1Q13907 227 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 HSP90AB3PQ58FF7 597 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 CCDC144CPQ8IYA2 1237 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms