RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
CCDC144A-205ENST00000399264 GNAT3A8MTJ3 354 aa17.87■□□□□ 0.45
CCDC144A-205ENST00000399264 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
CCDC144A-205ENST00000399264 ZBTB7CA1YPR0 619 aa17.87■□□□□ 0.45
CCDC144A-205ENST00000399264 HMMRO75330 724 aa17.87■□□□□ 0.45
CCDC144A-205ENST00000399264 NOL8Q76FK4 1167 aaKnown RBP17.87■□□□□ 0.45
CCDC144A-205ENST00000399264 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
CCDC144A-205ENST00000399264 PALD1Q9ULE6 856 aa17.86■□□□□ 0.45
CCDC144A-205ENST00000399264 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
CCDC144A-205ENST00000399264 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
CCDC144A-205ENST00000399264 ERC2O15083 957 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 RILPL2Q969X0 211 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 IL25Q9H293 177 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 ZDHHC9Q9Y397 364 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 PIK3C2AO00443 1686 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 FMN2Q9NZ56 1722 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 ERBB4Q15303 1308 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 ANXA1P04083 346 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 USP44Q9H0E7 712 aa17.85■□□□□ 0.45
CCDC144A-205ENST00000399264 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
CCDC144A-205ENST00000399264 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
CCDC144A-205ENST00000399264 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
CCDC144A-205ENST00000399264 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
CCDC144A-205ENST00000399264 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
CCDC144A-205ENST00000399264 SALL3Q9BXA9 1300 aa17.83■□□□□ 0.45
CCDC144A-205ENST00000399264 KCNQ3O43525 872 aa17.83■□□□□ 0.45
CCDC144A-205ENST00000399264 NEK4P51957 841 aa17.83■□□□□ 0.45
CCDC144A-205ENST00000399264 LRRCC1Q9C099 1032 aa17.83■□□□□ 0.45
CCDC144A-205ENST00000399264 LGR6Q9HBX8 967 aa17.83■□□□□ 0.45
CCDC144A-205ENST00000399264 MX1P20591 662 aa17.83■□□□□ 0.44
CCDC144A-205ENST00000399264 OSBPL3Q9H4L5 887 aa17.83■□□□□ 0.44
CCDC144A-205ENST00000399264 REC8O95072 547 aa17.82■□□□□ 0.44
CCDC144A-205ENST00000399264 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
CCDC144A-205ENST00000399264 ATP8B2P98198 1209 aa17.82■□□□□ 0.44
CCDC144A-205ENST00000399264 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
CCDC144A-205ENST00000399264 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
CCDC144A-205ENST00000399264 ST18O60284 1047 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 SKOR2Q2VWA4 1001 aaPredicted RBP17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 ESYT1Q9BSJ8 1104 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 LMBRD1Q9NUN5 540 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 PRPF40AO75400 957 aaKnown RBP17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 ANO2Q9NQ90 1003 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 NWD1Q149M9 1564 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 CLEC17AQ6ZS10 378 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 UPF3BQ9BZI7 483 aaKnown RBP17.8■□□□□ 0.44
CCDC144A-205ENST00000399264 GNAI3P08754 354 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 CHMLP26374 656 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 NSFL1CQ9UNZ2 370 aaKnown RBP17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 KLHL40Q2TBA0 621 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 FOXD4L6Q3SYB3 417 aaPredicted RBP17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 FOXD4L3Q6VB84 417 aaPredicted RBP17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 LRRC59Q96AG4 307 aaKnown RBP17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
CCDC144A-205ENST00000399264 DTNBO60941 627 aa17.78■□□□□ 0.44
CCDC144A-205ENST00000399264 IBTKQ9P2D0 1353 aaPredicted RBP17.78■□□□□ 0.44
CCDC144A-205ENST00000399264 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 NUCB2P80303 420 aa17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 GPT2Q8TD30 523 aa17.77■□□□□ 0.44
CCDC144A-205ENST00000399264 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
CCDC144A-205ENST00000399264 SURF6O75683 361 aaKnown RBP17.76■□□□□ 0.43
CCDC144A-205ENST00000399264 LARP6Q9BRS8 491 aaKnown RBP17.76■□□□□ 0.43
CCDC144A-205ENST00000399264 CHPF2Q9P2E5 772 aa17.76■□□□□ 0.43
CCDC144A-205ENST00000399264 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
CCDC144A-205ENST00000399264 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
CCDC144A-205ENST00000399264 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
CCDC144A-205ENST00000399264 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 PI4KAP2A4QPH2 592 aa17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 PI4KAP1Q8N8J0 262 aa17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 SLIT1O75093 1534 aa17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 ESPNB1AK53 854 aa17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 SOS1Q07889 1333 aaPredicted RBP17.74■□□□□ 0.43
CCDC144A-205ENST00000399264 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
CCDC144A-205ENST00000399264 CLCN1P35523 988 aa17.73■□□□□ 0.43
CCDC144A-205ENST00000399264 NASPP49321 788 aaPredicted RBP17.73■□□□□ 0.43
CCDC144A-205ENST00000399264 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
CCDC144A-205ENST00000399264 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
CCDC144A-205ENST00000399264 EIF4A1P60842 406 aaKnown RBP17.72■□□□□ 0.43
CCDC144A-205ENST00000399264 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
CCDC144A-205ENST00000399264 CWC22Q9HCG8 908 aaKnown RBP17.72■□□□□ 0.43
CCDC144A-205ENST00000399264 SRCIN1Q9C0H9 1055 aa17.72■□□□□ 0.43
CCDC144A-205ENST00000399264 STAP2Q9UGK3 403 aa17.72■□□□□ 0.43
CCDC144A-205ENST00000399264 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
CCDC144A-205ENST00000399264 RBSNQ9H1K0 784 aa17.71■□□□□ 0.43
CCDC144A-205ENST00000399264 ISY1Q9ULR0 285 aaKnown RBP17.71■□□□□ 0.43
CCDC144A-205ENST00000399264 LRRC37A3O60309 1634 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms