RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CDC45O75419 566 aa22■■□□□ 1.11
HLA-DQB1-204ENST00000399084 FKBP5Q13451 457 aaPredicted RBP22■■□□□ 1.11
HLA-DQB1-204ENST00000399084 NFKBIBQ15653 356 aa22■■□□□ 1.11
HLA-DQB1-204ENST00000399084 TEFQ10587 303 aa22■■□□□ 1.11
HLA-DQB1-204ENST00000399084 C1orf141Q5JVX7 400 aa22■■□□□ 1.11
HLA-DQB1-204ENST00000399084 EIF4A1P60842 406 aaKnown RBP21.99■■□□□ 1.11
HLA-DQB1-204ENST00000399084 HDGFL1Q5TGJ6 251 aa21.99■■□□□ 1.11
HLA-DQB1-204ENST00000399084 SNX21Q969T3 373 aa21.99■■□□□ 1.11
HLA-DQB1-204ENST00000399084 TBC1D2Q9BYX2 928 aa21.99■■□□□ 1.11
HLA-DQB1-204ENST00000399084 DEKP35659 375 aaKnown RBP21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 ZNF530Q6P9A1 599 aaPredicted RBP21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 SLC4A10Q6U841 1118 aa21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 ANKRD24Q8TF21 1146 aa21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 ABCC6O95255 1503 aa21.98■■□□□ 1.11
HLA-DQB1-204ENST00000399084 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
HLA-DQB1-204ENST00000399084 OSBPL3Q9H4L5 887 aa21.97■■□□□ 1.11
HLA-DQB1-204ENST00000399084 ALS2Q96Q42 1657 aa21.96■■□□□ 1.11
HLA-DQB1-204ENST00000399084 KDM3BQ7LBC6 1761 aa21.96■■□□□ 1.11
HLA-DQB1-204ENST00000399084 ATP8B2P98198 1209 aa21.95■■□□□ 1.1
HLA-DQB1-204ENST00000399084 CASC1Q6TDU7 716 aa21.95■■□□□ 1.1
HLA-DQB1-204ENST00000399084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
HLA-DQB1-204ENST00000399084 F6X3S4 739 aa21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 TBC1D9Q6ZT07 1266 aa21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 HDAC5Q9UQL6 1122 aa21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 NPHP3Q7Z494 1330 aa21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 RNMTO43148 476 aaKnown RBP21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 ANTXR1Q9H6X2 564 aa21.94■■□□□ 1.1
HLA-DQB1-204ENST00000399084 TMEM94Q12767 1356 aa21.93■■□□□ 1.1
HLA-DQB1-204ENST00000399084 BTBD11A6QL63 1104 aa21.93■■□□□ 1.1
HLA-DQB1-204ENST00000399084 HSCBQ8IWL3 235 aa21.93■■□□□ 1.1
HLA-DQB1-204ENST00000399084 LMOD2Q6P5Q4 547 aa21.92■■□□□ 1.1
HLA-DQB1-204ENST00000399084 LGR6Q9HBX8 967 aa21.92■■□□□ 1.1
HLA-DQB1-204ENST00000399084 LRRC59Q96AG4 307 aaKnown RBP21.92■■□□□ 1.1
HLA-DQB1-204ENST00000399084 ERBB3P21860 1342 aa21.91■■□□□ 1.1
HLA-DQB1-204ENST00000399084 SRCIN1Q9C0H9 1055 aa21.91■■□□□ 1.1
HLA-DQB1-204ENST00000399084 DBF4Q9UBU7 674 aaPredicted RBP21.91■■□□□ 1.1
HLA-DQB1-204ENST00000399084 HEG1Q9ULI3 1381 aa21.9■■□□□ 1.1
HLA-DQB1-204ENST00000399084 ADAMTS7Q9UKP4 1686 aa21.9■■□□□ 1.1
HLA-DQB1-204ENST00000399084 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
HLA-DQB1-204ENST00000399084 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
HLA-DQB1-204ENST00000399084 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.1
HLA-DQB1-204ENST00000399084 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.09
HLA-DQB1-204ENST00000399084 XPCQ01831 940 aaPredicted RBP21.89■■□□□ 1.09
HLA-DQB1-204ENST00000399084 USP44Q9H0E7 712 aa21.89■■□□□ 1.09
HLA-DQB1-204ENST00000399084 RAB11FIP3O75154 756 aa21.88■■□□□ 1.09
HLA-DQB1-204ENST00000399084 LRRCC1Q9C099 1032 aa21.88■■□□□ 1.09
HLA-DQB1-204ENST00000399084 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
HLA-DQB1-204ENST00000399084 IL27Q8NEV9 243 aa21.87■■□□□ 1.09
HLA-DQB1-204ENST00000399084 RAPGEF4Q8WZA2 1011 aa21.87■■□□□ 1.09
HLA-DQB1-204ENST00000399084 CHMP5Q9NZZ3 219 aa21.87■■□□□ 1.09
HLA-DQB1-204ENST00000399084 SPG7Q9UQ90 795 aa21.87■■□□□ 1.09
HLA-DQB1-204ENST00000399084 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
HLA-DQB1-204ENST00000399084 AOX1Q06278 1338 aa21.86■■□□□ 1.09
HLA-DQB1-204ENST00000399084 MPRIPQ6WCQ1 1025 aa21.86■■□□□ 1.09
HLA-DQB1-204ENST00000399084 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
HLA-DQB1-204ENST00000399084 DNAAF4Q8WXU2 420 aa21.86■■□□□ 1.09
HLA-DQB1-204ENST00000399084 TNS3Q68CZ2 1445 aa21.85■■□□□ 1.09
HLA-DQB1-204ENST00000399084 CPDO75976 1380 aa21.85■■□□□ 1.09
HLA-DQB1-204ENST00000399084 ALDH1L1O75891 902 aa21.85■■□□□ 1.09
HLA-DQB1-204ENST00000399084 CIZ1Q9ULV3 898 aaPredicted RBP21.85■■□□□ 1.09
HLA-DQB1-204ENST00000399084 GIGYF1O75420 1035 aaPredicted RBP21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 REC8O95072 547 aa21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 PDE1AP54750 535 aa21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 C16orf71Q8IYS4 520 aaPredicted RBP21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 HYPKQ9NX55 129 aa21.84■■□□□ 1.09
HLA-DQB1-204ENST00000399084 TATP17735 454 aaPredicted RBP21.83■■□□□ 1.09
HLA-DQB1-204ENST00000399084 SDSP20132 328 aa21.83■■□□□ 1.09
HLA-DQB1-204ENST00000399084 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
HLA-DQB1-204ENST00000399084 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
HLA-DQB1-204ENST00000399084 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.08
HLA-DQB1-204ENST00000399084 BEND3Q5T5X7 828 aa21.83■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PHAXQ9H814 394 aaKnown RBP21.83■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SIPA1L3O60292 1781 aaPredicted RBP21.83■■□□□ 1.08
HLA-DQB1-204ENST00000399084 HSP90AB1P08238 724 aaKnown RBP21.82■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SLKQ9H2G2 1235 aaPredicted RBP21.82■■□□□ 1.08
HLA-DQB1-204ENST00000399084 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
HLA-DQB1-204ENST00000399084 LRRFIP2Q9Y608 721 aaKnown RBP21.82■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SPATA31A3Q5VYP0 1347 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PXDNQ92626 1479 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 EPB41L2O43491 1005 aaKnown RBP21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 POLA2Q14181 598 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 GSE1Q14687 1217 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 RABEP1Q15276 862 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 KIF2CQ99661 725 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 STRCP1A6NGW2 1772 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 COL18A1P39060 1754 aa21.81■■□□□ 1.08
HLA-DQB1-204ENST00000399084 DDX58O95786 925 aaKnown RBP21.8■■□□□ 1.08
HLA-DQB1-204ENST00000399084 ZC3H6P61129 1189 aaKnown RBP21.8■■□□□ 1.08
HLA-DQB1-204ENST00000399084 KSR2Q6VAB6 950 aa21.8■■□□□ 1.08
HLA-DQB1-204ENST00000399084 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PI4KAP2A4QPH2 592 aa21.79■■□□□ 1.08
HLA-DQB1-204ENST00000399084 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
HLA-DQB1-204ENST00000399084 MTX1Q13505 466 aa21.79■■□□□ 1.08
HLA-DQB1-204ENST00000399084 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
HLA-DQB1-204ENST00000399084 PI4KAP1Q8N8J0 262 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms