RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SLC52A2Q9HAB3 445 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 CASZ1Q86V15 1759 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 GNAT3A8MTJ3 354 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 ITPK1Q13572 414 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 PNPLA7Q6ZV29 1317 aa18.79■□□□□ 0.6
HLA-DQB1-202ENST00000399079 MAP3K5Q99683 1374 aa18.78■□□□□ 0.6
HLA-DQB1-202ENST00000399079 LRP5O75197 1615 aa18.78■□□□□ 0.6
HLA-DQB1-202ENST00000399079 PTCD1O75127 700 aaKnown RBP18.78■□□□□ 0.6
HLA-DQB1-202ENST00000399079 IL17REQ8NFR9 667 aa18.78■□□□□ 0.6
HLA-DQB1-202ENST00000399079 C5P01031 1676 aa18.77■□□□□ 0.6
HLA-DQB1-202ENST00000399079 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
HLA-DQB1-202ENST00000399079 SPON1Q9HCB6 807 aa18.77■□□□□ 0.6
HLA-DQB1-202ENST00000399079 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
HLA-DQB1-202ENST00000399079 TAF1LQ8IZX4 1826 aa18.76■□□□□ 0.59
HLA-DQB1-202ENST00000399079 SLC39A6Q13433 755 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 SMIM5Q71RC9 77 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 AMIGO3Q86WK7 504 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 ADAMTS7Q9UKP4 1686 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 MRC1P22897 1456 aa18.75■□□□□ 0.59
HLA-DQB1-202ENST00000399079 VIRMAQ69YN4 1812 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-202ENST00000399079 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
HLA-DQB1-202ENST00000399079 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
HLA-DQB1-202ENST00000399079 COL23A1Q86Y22 540 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-202ENST00000399079 AK7Q96M32 723 aa18.73■□□□□ 0.59
HLA-DQB1-202ENST00000399079 MTFR1LQ9H019 292 aa18.73■□□□□ 0.59
HLA-DQB1-202ENST00000399079 MSH5O43196 834 aa18.72■□□□□ 0.59
HLA-DQB1-202ENST00000399079 PTGER2P43116 358 aa18.72■□□□□ 0.59
HLA-DQB1-202ENST00000399079 TEFQ10587 303 aa18.72■□□□□ 0.59
HLA-DQB1-202ENST00000399079 DCTN1Q14203 1278 aa18.72■□□□□ 0.59
HLA-DQB1-202ENST00000399079 MCM10Q7L590 875 aa18.72■□□□□ 0.59
HLA-DQB1-202ENST00000399079 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.59
HLA-DQB1-202ENST00000399079 PHF14O94880 888 aa18.7■□□□□ 0.58
HLA-DQB1-202ENST00000399079 NEFMP07197 916 aa18.7■□□□□ 0.58
HLA-DQB1-202ENST00000399079 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
HLA-DQB1-202ENST00000399079 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
HLA-DQB1-202ENST00000399079 GNPATO15228 680 aa18.69■□□□□ 0.58
HLA-DQB1-202ENST00000399079 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-202ENST00000399079 SLC16A10Q8TF71 515 aa18.69■□□□□ 0.58
HLA-DQB1-202ENST00000399079 SGIP1Q9BQI5 828 aa18.69■□□□□ 0.58
HLA-DQB1-202ENST00000399079 PPP1R1BQ9UD71 204 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-202ENST00000399079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB1-202ENST00000399079 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB1-202ENST00000399079 MAPK8IP3Q9UPT6 1336 aa18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 WDR43Q15061 677 aaKnown RBP eCLIP18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 NFE2L2Q16236 605 aa18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 ADAMTS8Q9UP79 889 aa18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 ZNF831Q5JPB2 1677 aa18.67■□□□□ 0.58
HLA-DQB1-202ENST00000399079 UBR3Q6ZT12 1888 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 CCDC184Q52MB2 194 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 ZNF790Q6PG37 636 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 DNAJC10Q8IXB1 793 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 TTC5Q8N0Z6 440 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 FLAD1Q8NFF5 587 aa18.66■□□□□ 0.58
HLA-DQB1-202ENST00000399079 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 KCNQ3O43525 872 aa18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 HTATSF1O43719 755 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 SSFA2P28290 1259 aa18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 SIPA1L3O60292 1781 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB1-202ENST00000399079 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.58
HLA-DQB1-202ENST00000399079 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.58
HLA-DQB1-202ENST00000399079 COL5A3P25940 1745 aaPredicted RBP18.64■□□□□ 0.58
HLA-DQB1-202ENST00000399079 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
HLA-DQB1-202ENST00000399079 TJP1Q07157 1748 aa18.64■□□□□ 0.57
HLA-DQB1-202ENST00000399079 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-202ENST00000399079 RTCBQ9Y3I0 505 aaKnown RBP18.64■□□□□ 0.57
HLA-DQB1-202ENST00000399079 MYH14Q7Z406 1995 aaKnown RBP18.63■□□□□ 0.57
HLA-DQB1-202ENST00000399079 DLG5Q8TDM6 1919 aa18.63■□□□□ 0.57
HLA-DQB1-202ENST00000399079 ANP32CO43423 234 aa18.63■□□□□ 0.57
HLA-DQB1-202ENST00000399079 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 RIPK4P57078 832 aa18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 INTS5Q6P9B9 1019 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
HLA-DQB1-202ENST00000399079 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB1-202ENST00000399079 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB1-202ENST00000399079 TRAPPC3LQ5T215 181 aa18.61■□□□□ 0.57
HLA-DQB1-202ENST00000399079 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
HLA-DQB1-202ENST00000399079 ARXQ96QS3 562 aa18.61■□□□□ 0.57
HLA-DQB1-202ENST00000399079 POLD1P28340 1107 aa18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 TAF7Q15545 349 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB1-202ENST00000399079 FMNL2Q96PY5 1086 aa18.59■□□□□ 0.57
HLA-DQB1-202ENST00000399079 FHDC1Q9C0D6 1143 aaPredicted RBP18.59■□□□□ 0.57
HLA-DQB1-202ENST00000399079 CCDC87Q9NVE4 849 aa18.59■□□□□ 0.57
HLA-DQB1-202ENST00000399079 UTRNP46939 3433 aa18.58■□□□□ 0.57
HLA-DQB1-202ENST00000399079 ZBTB1Q9Y2K1 713 aa18.58■□□□□ 0.56
HLA-DQB1-202ENST00000399079 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms