RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PDRG1Q9NUG6 133 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
SEC24A-202ENST00000398844 ATP5J2-PTCD1G3V325 749 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 CCDC83Q8IWF9 413 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 SYCE3A1L190 88 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 ANKRD24Q8TF21 1146 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.92□□□□□ -0.66
SEC24A-202ENST00000398844 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 PHAXQ9H814 394 aaKnown RBP10.92□□□□□ -0.66
SEC24A-202ENST00000398844 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
SEC24A-202ENST00000398844 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 KRT28Q7Z3Y7 464 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 PI4KAP1Q8N8J0 262 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 TSPY26PQ9H489 355 aa10.92□□□□□ -0.66
SEC24A-202ENST00000398844 PTPRCP08575 1304 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 CAMK4Q16566 473 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 RAD21O60216 631 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 PPP1R42Q7Z4L9 355 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 EYA1Q99502 592 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 ATP6V1DQ9Y5K8 247 aa10.91□□□□□ -0.66
SEC24A-202ENST00000398844 PA2G4Q9UQ80 394 aaKnown RBP10.91□□□□□ -0.66
SEC24A-202ENST00000398844 RRP12Q5JTH9 1297 aaKnown RBP10.9□□□□□ -0.66
SEC24A-202ENST00000398844 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 DDX11Q96FC9 970 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 RASSF8Q8NHQ8 419 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 PLEKHF1Q96S99 279 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 CNNM1Q9NRU3 951 aa10.9□□□□□ -0.66
SEC24A-202ENST00000398844 CPLX1O14810 134 aa10.9□□□□□ -0.67
SEC24A-202ENST00000398844 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.67
SEC24A-202ENST00000398844 GOLGA6L19H0YKK7 550 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 CEP85Q6P2H3 762 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 RBM10P98175 930 aaKnown RBP10.89□□□□□ -0.67
SEC24A-202ENST00000398844 FAM13BQ9NYF5 915 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 PSMA5P28066 241 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 ZFYVE9O95405 1425 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 PIP4K2BP78356 416 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 BMP2KLQ5H9B9 411 aa10.89□□□□□ -0.67
SEC24A-202ENST00000398844 HOXC9P31274 260 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 KCNH5Q8NCM2 988 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 GLI2P10070 1586 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 METP08581 1390 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 KCNA6P17658 529 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 TPM4P67936 248 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 PRDM11Q9NQV5 511 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 BECN2A8MW95 431 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 SASS6Q6UVJ0 657 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 BICDL1Q6ZP65 573 aa10.88□□□□□ -0.67
SEC24A-202ENST00000398844 HSP90AA2PQ14568 343 aaPredicted RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 CWF19L2Q2TBE0 894 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 RAB11FIP4Q86YS3 637 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 MYOM2P54296 1465 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 KIF1BPQ96EK5 621 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 ZBTB3Q9H5J0 574 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 CDK11BP21127 795 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 PLEKHM2Q8IWE5 1019 aa10.87□□□□□ -0.67
SEC24A-202ENST00000398844 CWC22Q9HCG8 908 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 PPRC1Q5VV67 1664 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
SEC24A-202ENST00000398844 G3V3G9 751 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 GUCY1B3Q02153 619 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 LGR6Q9HBX8 967 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 CLSTN1O94985 981 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 LTKP29376 864 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 ABCC3O15438 1527 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 RNF17Q9BXT8 1623 aaKnown RBP10.86□□□□□ -0.67
SEC24A-202ENST00000398844 ATP2B1P20020 1258 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 TRDNQ13061 729 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 LARP1BQ659C4 914 aaKnown RBP10.86□□□□□ -0.67
SEC24A-202ENST00000398844 ZGPATQ8N5A5 531 aaKnown RBP10.86□□□□□ -0.67
SEC24A-202ENST00000398844 EDC4Q6P2E9 1401 aaKnown RBP10.86□□□□□ -0.67
SEC24A-202ENST00000398844 EFCAB6Q5THR3 1501 aa10.86□□□□□ -0.67
SEC24A-202ENST00000398844 NPC1L1Q9UHC9 1359 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 TRIM29Q14134 588 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 TCEANC2Q96MN5 208 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 SYNE3Q6ZMZ3 975 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 NRDCO43847 1150 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
SEC24A-202ENST00000398844 GPTP24298 496 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 PDE1AP54750 535 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 CCDC158Q5M9N0 1113 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
SEC24A-202ENST00000398844 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 RAB11FIP3O75154 756 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
SEC24A-202ENST00000398844 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 PIBF1Q8WXW3 757 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
SEC24A-202ENST00000398844 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
SEC24A-202ENST00000398844 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms