RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 GSE1Q14687 1217 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 NME8Q8N427 588 aa13.38□□□□□ -0.27
MSL3-207ENST00000398527 THSD7AQ9UPZ6 1657 aa13.37□□□□□ -0.27
MSL3-207ENST00000398527 DNAJC14Q6Y2X3 702 aaPredicted RBP13.37□□□□□ -0.27
MSL3-207ENST00000398527 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
MSL3-207ENST00000398527 ZNF513Q8N8E2 541 aaPredicted RBP13.37□□□□□ -0.27
MSL3-207ENST00000398527 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
MSL3-207ENST00000398527 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
MSL3-207ENST00000398527 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
MSL3-207ENST00000398527 TNS3Q68CZ2 1445 aa13.37□□□□□ -0.27
MSL3-207ENST00000398527 TPM2P07951 284 aa13.36□□□□□ -0.27
MSL3-207ENST00000398527 NBPF10Q6P3W6 841 aaKnown RBP13.36□□□□□ -0.27
MSL3-207ENST00000398527 GOLIM4O00461 696 aa13.36□□□□□ -0.27
MSL3-207ENST00000398527 KCNQ2O43526 872 aa13.36□□□□□ -0.27
MSL3-207ENST00000398527 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.27
MSL3-207ENST00000398527 PDE4AP27815 886 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 TMCO4Q5TGY1 634 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
MSL3-207ENST00000398527 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
MSL3-207ENST00000398527 FAM83GA6ND36 823 aa13.34□□□□□ -0.27
MSL3-207ENST00000398527 APBB1O00213 710 aa13.34□□□□□ -0.27
MSL3-207ENST00000398527 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
MSL3-207ENST00000398527 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
MSL3-207ENST00000398527 MAP7D2Q96T17 732 aa13.34□□□□□ -0.27
MSL3-207ENST00000398527 EVC2Q86UK5 1308 aa13.33□□□□□ -0.27
MSL3-207ENST00000398527 TULP4Q9NRJ4 1543 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 ANKRD36BQ8N2N9 1353 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 TRIM37O94972 964 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 APBA3O96018 575 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
MSL3-207ENST00000398527 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
MSL3-207ENST00000398527 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
MSL3-207ENST00000398527 STK26Q9P289 416 aa13.32□□□□□ -0.28
MSL3-207ENST00000398527 NUTM2FA1L443 756 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 PDE3AQ14432 1141 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
MSL3-207ENST00000398527 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
MSL3-207ENST00000398527 SATB1Q01826 763 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 APBB1IPQ7Z5R6 666 aaPredicted RBP13.31□□□□□ -0.28
MSL3-207ENST00000398527 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 SBNO1A3KN83 1393 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 ARHGEF10O15013 1369 aa13.31□□□□□ -0.28
MSL3-207ENST00000398527 NRDCO43847 1150 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 PSME1Q06323 249 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 PLIN1O60240 522 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 RNF217Q8TC41 542 aa13.3□□□□□ -0.28
MSL3-207ENST00000398527 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
MSL3-207ENST00000398527 APAF1O14727 1248 aa13.29□□□□□ -0.28
MSL3-207ENST00000398527 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
MSL3-207ENST00000398527 SSR1P43307 286 aaKnown RBP13.29□□□□□ -0.28
MSL3-207ENST00000398527 ARHGEF1Q92888 912 aaKnown RBP13.29□□□□□ -0.28
MSL3-207ENST00000398527 WDR63Q8IWG1 891 aa13.29□□□□□ -0.28
MSL3-207ENST00000398527 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
MSL3-207ENST00000398527 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
MSL3-207ENST00000398527 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 SDR16C5Q8N3Y7 309 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 RUNDC1Q96C34 613 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 CHD4Q14839 1912 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 VIRMAQ69YN4 1812 aaKnown RBP13.28□□□□□ -0.28
MSL3-207ENST00000398527 CLCN1P35523 988 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 FOXD4Q12950 439 aaPredicted RBP13.28□□□□□ -0.28
MSL3-207ENST00000398527 MTA1Q13330 715 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 SLC12A5Q9H2X9 1139 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 RPS6KL1Q9Y6S9 549 aa13.28□□□□□ -0.28
MSL3-207ENST00000398527 DLC1Q96QB1 1528 aa13.27□□□□□ -0.28
MSL3-207ENST00000398527 TECPR2O15040 1411 aa13.27□□□□□ -0.28
MSL3-207ENST00000398527 C20orf194Q5TEA3 1177 aa13.27□□□□□ -0.28
MSL3-207ENST00000398527 MORC1Q86VD1 984 aa13.27□□□□□ -0.28
MSL3-207ENST00000398527 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
MSL3-207ENST00000398527 ANKRD23Q86SG2 305 aa13.27□□□□□ -0.29
MSL3-207ENST00000398527 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
MSL3-207ENST00000398527 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
MSL3-207ENST00000398527 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
MSL3-207ENST00000398527 SCP2P22307 547 aa13.26□□□□□ -0.29
MSL3-207ENST00000398527 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
MSL3-207ENST00000398527 GZF1Q9H116 711 aaPredicted RBP13.26□□□□□ -0.29
MSL3-207ENST00000398527 CASZ1Q86V15 1759 aa13.26□□□□□ -0.29
MSL3-207ENST00000398527 GOLGA6CA6NDK9 693 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 GOLGA6DP0CG33 693 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 EVI5LQ96CN4 794 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 MTA3Q9BTC8 594 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 GOLGA6AQ9NYA3 693 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 TPD52L2O43399 206 aaKnown RBP13.25□□□□□ -0.29
MSL3-207ENST00000398527 MARCH6O60337 910 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms