RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 QSER1Q2KHR3 1735 aa18.97■□□□□ 0.63
HDDC2-202ENST00000398153 LOC102724428A0A0B4J2F2 783 aa18.97■□□□□ 0.63
HDDC2-202ENST00000398153 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
HDDC2-202ENST00000398153 SIK1P57059 783 aa18.97■□□□□ 0.63
HDDC2-202ENST00000398153 LGR6Q9HBX8 967 aa18.97■□□□□ 0.63
HDDC2-202ENST00000398153 C5P01031 1676 aa18.96■□□□□ 0.63
HDDC2-202ENST00000398153 TAF1LQ8IZX4 1826 aa18.96■□□□□ 0.63
HDDC2-202ENST00000398153 LRP5O75197 1615 aa18.96■□□□□ 0.63
HDDC2-202ENST00000398153 PLEKHF1Q96S99 279 aa18.95■□□□□ 0.62
HDDC2-202ENST00000398153 CEMIPQ8WUJ3 1361 aa18.94■□□□□ 0.62
HDDC2-202ENST00000398153 CASZ1Q86V15 1759 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 ANP32CO43423 234 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 ATP6V1AP38606 617 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 KCNQ4P56696 695 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 TEFQ10587 303 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 ZNF827Q17R98 1081 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 FLAD1Q8NFF5 587 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 IL17REQ8NFR9 667 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 SLC16A10Q8TF71 515 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 RTF1Q92541 710 aaKnown RBP18.93■□□□□ 0.62
HDDC2-202ENST00000398153 TFCP2L1Q9NZI6 479 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 MAPK8IP3Q9UPT6 1336 aa18.93■□□□□ 0.62
HDDC2-202ENST00000398153 WDR43Q15061 677 aaKnown RBP eCLIP18.92■□□□□ 0.62
HDDC2-202ENST00000398153 SPON1Q9HCB6 807 aa18.91■□□□□ 0.62
HDDC2-202ENST00000398153 C4BP0C0L5 1744 aa18.91■□□□□ 0.62
HDDC2-202ENST00000398153 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
HDDC2-202ENST00000398153 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
HDDC2-202ENST00000398153 SIPA1L3O60292 1781 aaPredicted RBP18.89■□□□□ 0.61
HDDC2-202ENST00000398153 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
HDDC2-202ENST00000398153 RC3H1Q5TC82 1133 aaKnown RBP18.89■□□□□ 0.61
HDDC2-202ENST00000398153 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
HDDC2-202ENST00000398153 MTFR1LQ9H019 292 aa18.89■□□□□ 0.61
HDDC2-202ENST00000398153 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.61
HDDC2-202ENST00000398153 ITPK1Q13572 414 aa18.88■□□□□ 0.61
HDDC2-202ENST00000398153 AK7Q96M32 723 aa18.88■□□□□ 0.61
HDDC2-202ENST00000398153 PNPLA7Q6ZV29 1317 aa18.88■□□□□ 0.61
HDDC2-202ENST00000398153 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
HDDC2-202ENST00000398153 TTC5Q8N0Z6 440 aa18.87■□□□□ 0.61
HDDC2-202ENST00000398153 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
HDDC2-202ENST00000398153 SLC4A9Q96Q91 983 aa18.87■□□□□ 0.61
HDDC2-202ENST00000398153 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
HDDC2-202ENST00000398153 SSFA2P28290 1259 aa18.86■□□□□ 0.61
HDDC2-202ENST00000398153 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
HDDC2-202ENST00000398153 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
HDDC2-202ENST00000398153 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
HDDC2-202ENST00000398153 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
HDDC2-202ENST00000398153 CNTNAP4Q9C0A0 1308 aa18.85■□□□□ 0.61
HDDC2-202ENST00000398153 LMOD3Q0VAK6 560 aa18.85■□□□□ 0.61
HDDC2-202ENST00000398153 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
HDDC2-202ENST00000398153 PDGFDQ9GZP0 370 aaPredicted RBP18.85■□□□□ 0.61
HDDC2-202ENST00000398153 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
HDDC2-202ENST00000398153 UBR3Q6ZT12 1888 aa18.84■□□□□ 0.61
HDDC2-202ENST00000398153 BTBD11A6QL63 1104 aa18.84■□□□□ 0.61
HDDC2-202ENST00000398153 MCM10Q7L590 875 aa18.84■□□□□ 0.61
HDDC2-202ENST00000398153 TEX13AQ9BXU3 409 aaPredicted RBP18.84■□□□□ 0.61
HDDC2-202ENST00000398153 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
HDDC2-202ENST00000398153 ADRA2BP18089 450 aa18.83■□□□□ 0.6
HDDC2-202ENST00000398153 SLC39A6Q13433 755 aa18.83■□□□□ 0.6
HDDC2-202ENST00000398153 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
HDDC2-202ENST00000398153 PNISRQ8TF01 805 aaKnown RBP18.83■□□□□ 0.6
HDDC2-202ENST00000398153 ZBTB7AO95365 584 aa18.82■□□□□ 0.6
HDDC2-202ENST00000398153 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
HDDC2-202ENST00000398153 COL23A1Q86Y22 540 aaPredicted RBP18.82■□□□□ 0.6
HDDC2-202ENST00000398153 RTCBQ9Y3I0 505 aaKnown RBP18.82■□□□□ 0.6
HDDC2-202ENST00000398153 TJP1Q07157 1748 aa18.81■□□□□ 0.6
HDDC2-202ENST00000398153 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
HDDC2-202ENST00000398153 GNPATO15228 680 aa18.81■□□□□ 0.6
HDDC2-202ENST00000398153 RIPK4P57078 832 aa18.81■□□□□ 0.6
HDDC2-202ENST00000398153 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
HDDC2-202ENST00000398153 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.8■□□□□ 0.6
HDDC2-202ENST00000398153 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
HDDC2-202ENST00000398153 PTGER2P43116 358 aa18.8■□□□□ 0.6
HDDC2-202ENST00000398153 HEG1Q9ULI3 1381 aa18.8■□□□□ 0.6
HDDC2-202ENST00000398153 MSH5O43196 834 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 STARD3NLO95772 234 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 CRKLP46109 303 aaKnown RBP18.79■□□□□ 0.6
HDDC2-202ENST00000398153 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 TRAPPC3LQ5T215 181 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-202ENST00000398153 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 BABAM1Q9NWV8 329 aa18.79■□□□□ 0.6
HDDC2-202ENST00000398153 PPP1R1BQ9UD71 204 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-202ENST00000398153 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-202ENST00000398153 CYP19A1P11511 503 aaPredicted RBP18.78■□□□□ 0.6
HDDC2-202ENST00000398153 POLD1P28340 1107 aa18.78■□□□□ 0.6
HDDC2-202ENST00000398153 DNAJC10Q8IXB1 793 aa18.77■□□□□ 0.6
HDDC2-202ENST00000398153 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
HDDC2-202ENST00000398153 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
HDDC2-202ENST00000398153 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
HDDC2-202ENST00000398153 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.59
HDDC2-202ENST00000398153 PHF14O94880 888 aa18.75■□□□□ 0.59
HDDC2-202ENST00000398153 INTS5Q6P9B9 1019 aaKnown RBP18.75■□□□□ 0.59
HDDC2-202ENST00000398153 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
HDDC2-202ENST00000398153 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
HDDC2-202ENST00000398153 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
HDDC2-202ENST00000398153 RFC4P35249 363 aa18.73■□□□□ 0.59
HDDC2-202ENST00000398153 NCBP3Q53F19 620 aaKnown RBP18.73■□□□□ 0.59
HDDC2-202ENST00000398153 ARHGEF1Q92888 912 aaKnown RBP18.73■□□□□ 0.59
HDDC2-202ENST00000398153 ARXQ96QS3 562 aa18.73■□□□□ 0.59
HDDC2-202ENST00000398153 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms