RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 RGL3Q3MIN7 710 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 MYSM1Q5VVJ2 828 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 HDGFL2Q7Z4V5 671 aaPredicted RBP5.21□□□□□ -1.58
UBE3A-202ENST00000397954 NLRP13Q86W25 1043 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 NUDT16Q96DE0 195 aaKnown RBP5.21□□□□□ -1.58
UBE3A-202ENST00000397954 USP47Q96K76 1375 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 BRWD3Q6RI45 1802 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 SOCS7O14512 581 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 BRD1O95696 1058 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 ABL2P42684 1182 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 FAM161AQ3B820 660 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 KRT28Q7Z3Y7 464 aa5.21□□□□□ -1.58
UBE3A-202ENST00000397954 DISP3Q9P2K9 1392 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 BCL9LQ86UU0 1499 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 TBC1D12O60347 775 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 ESCO1Q5FWF5 840 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 ADAMTS19Q8TE59 1207 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 UPF1Q92900 1129 aaKnown RBP eCLIP5.2□□□□□ -1.58
UBE3A-202ENST00000397954 CDK19Q9BWU1 502 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 GPCPD1Q9NPB8 672 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 TBC1D2BQ9UPU7 963 aa5.2□□□□□ -1.58
UBE3A-202ENST00000397954 CRB1P82279 1406 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 CARD11Q9BXL7 1154 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 CHMP4AQ9BY43 222 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 PIP4K2BP78356 416 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 KCNA1Q09470 495 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 PPARGC1BQ86YN6 1023 aaKnown RBP5.19□□□□□ -1.58
UBE3A-202ENST00000397954 UNC5CLQ8IV45 518 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 CDHR5Q9HBB8 845 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 COL5A2P05997 1499 aaPredicted RBP5.19□□□□□ -1.58
UBE3A-202ENST00000397954 INSRP06213 1382 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 ADAMTS7Q9UKP4 1686 aa5.19□□□□□ -1.58
UBE3A-202ENST00000397954 PRR36Q9H6K5 1346 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 CLCN1P35523 988 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 ZEB1P37275 1124 aaPredicted RBP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 MEX3CQ5U5Q3 659 aaKnown RBP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 FAM177A1Q8N128 213 aaPredicted RBP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 PBXIP1Q96AQ6 731 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 TRPC6Q9Y210 931 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 MAP3K9P80192 1104 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 FOXK1P85037 733 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 LY75O60449 1722 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 SHANK3Q9BYB0 1731 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 OVOS2A0A0G2JMS6 1433 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 ACEP12821 1306 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 HMGB1P09429 215 aaKnown RBP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 CLK2P49760 499 aaKnown RBP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 SND1Q7KZF4 910 aaKnown RBP eCLIP5.18□□□□□ -1.58
UBE3A-202ENST00000397954 PLPP6Q8IY26 295 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 TRAK1Q9UPV9 953 aa5.18□□□□□ -1.58
UBE3A-202ENST00000397954 RGS12O14924 1447 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 TNS2Q63HR2 1409 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 RGPD5Q99666 1765 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 RXRBP28702 533 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 GOLGA2Q08379 1002 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 DPY19L2Q6NUT2 758 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 NGDNQ8NEJ9 315 aaKnown RBP5.17□□□□□ -1.58
UBE3A-202ENST00000397954 TESK2Q96S53 571 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 LIMD1Q9UGP4 676 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 EIF4G2P78344 907 aaKnown RBP eCLIP5.17□□□□□ -1.58
UBE3A-202ENST00000397954 SRPK2P78362 688 aaKnown RBP5.17□□□□□ -1.58
UBE3A-202ENST00000397954 TMEM132EQ6IEE7 984 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 WAPLQ7Z5K2 1190 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 NUP188Q5SRE5 1749 aa5.17□□□□□ -1.58
UBE3A-202ENST00000397954 MAP2P11137 1827 aaKnown RBP5.16□□□□□ -1.58
UBE3A-202ENST00000397954 AFF2P51816 1311 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 TTC21BQ7Z4L5 1316 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 FAM217BQ9NTX9 383 aaPredicted RBP5.16□□□□□ -1.58
UBE3A-202ENST00000397954 SPATA31A5Q5VU36 1347 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 SPATA31A7Q8IWB4 1347 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 NSD3Q9BZ95 1437 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 TMEM106CQ9BVX2 250 aa5.16□□□□□ -1.58
UBE3A-202ENST00000397954 NPDC1Q9NQX5 325 aaPredicted RBP5.16□□□□□ -1.58
UBE3A-202ENST00000397954 C5P01031 1676 aa5.15□□□□□ -1.58
UBE3A-202ENST00000397954 NUTM2DQ5VT03 806 aaPredicted RBP5.15□□□□□ -1.58
UBE3A-202ENST00000397954 IGSF5Q9NSI5 407 aa5.15□□□□□ -1.58
UBE3A-202ENST00000397954 STK26Q9P289 416 aa5.15□□□□□ -1.58
UBE3A-202ENST00000397954 A0A1W2PP64 1363 aa5.15□□□□□ -1.58
UBE3A-202ENST00000397954 VIRMAQ69YN4 1812 aaKnown RBP5.15□□□□□ -1.58
UBE3A-202ENST00000397954 PAPPAQ13219 1627 aa5.15□□□□□ -1.59
UBE3A-202ENST00000397954 HDGFL1Q5TGJ6 251 aa5.15□□□□□ -1.59
UBE3A-202ENST00000397954 ORAI2Q96SN7 254 aa5.15□□□□□ -1.59
UBE3A-202ENST00000397954 KIAA1522Q9P206 1035 aaPredicted RBP5.15□□□□□ -1.59
UBE3A-202ENST00000397954 FLT4P35916 1363 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 CSB-PGBD3P0DP91 1061 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 BANK1Q8NDB2 785 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 GJD4Q96KN9 370 aaPredicted RBP5.14□□□□□ -1.59
UBE3A-202ENST00000397954 USP21Q9UK80 565 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 USTQ9Y2C2 406 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 WDR17Q8IZU2 1322 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 MAP3K5Q99683 1374 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 C2orf72A6NCS6 295 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 TMC2Q8TDI7 906 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.14□□□□□ -1.598e-7■■■■□ 22.7
UBE3A-202ENST00000397954 CARD10Q9BWT7 1032 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 TBC1D2Q9BYX2 928 aa5.14□□□□□ -1.59
UBE3A-202ENST00000397954 SPATA31A1Q5TZJ5 1347 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 SCN11AQ9UI33 1791 aa5.13□□□□□ -1.59
UBE3A-202ENST00000397954 PATL2C9JE40 543 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms