RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GZF1Q9H116 711 aaPredicted RBP22.66■■□□□ 1.22
CHRFAM7A-202ENST00000397827 PSME1Q06323 249 aa22.65■■□□□ 1.22
CHRFAM7A-202ENST00000397827 NBPF6Q5VWK0 638 aa22.65■■□□□ 1.22
CHRFAM7A-202ENST00000397827 NBPF4Q96M43 638 aa22.65■■□□□ 1.22
CHRFAM7A-202ENST00000397827 K7ELQ4 463 aaPredicted RBP22.65■■□□□ 1.22
CHRFAM7A-202ENST00000397827 IP6K1Q92551 441 aa22.64■■□□□ 1.21
CHRFAM7A-202ENST00000397827 LTN1O94822 1766 aa22.64■■□□□ 1.21
CHRFAM7A-202ENST00000397827 CHD2O14647 1828 aaKnown RBP22.63■■□□□ 1.21
CHRFAM7A-202ENST00000397827 USP26Q9BXU7 913 aa22.63■■□□□ 1.21
CHRFAM7A-202ENST00000397827 PNMA6EA0A0J9YXQ4 647 aa22.63■■□□□ 1.21
CHRFAM7A-202ENST00000397827 ARXQ96QS3 562 aa22.63■■□□□ 1.21
CHRFAM7A-202ENST00000397827 FAM208AQ9UK61 1670 aaKnown RBP22.62■■□□□ 1.21
CHRFAM7A-202ENST00000397827 TSHZ3Q63HK5 1081 aa22.62■■□□□ 1.21
CHRFAM7A-202ENST00000397827 USP54Q70EL1 1684 aa22.62■■□□□ 1.21
CHRFAM7A-202ENST00000397827 PHAXQ9H814 394 aaKnown RBP22.62■■□□□ 1.21
CHRFAM7A-202ENST00000397827 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
CHRFAM7A-202ENST00000397827 XPCQ01831 940 aaPredicted RBP22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 HDGFL1Q5TGJ6 251 aa22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 TNPO1Q92973 898 aaKnown RBP22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 TRAK2O60296 914 aa22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 LRRC59Q96AG4 307 aaKnown RBP22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 PDE1AP54750 535 aa22.61■■□□□ 1.21
CHRFAM7A-202ENST00000397827 GNAI3P08754 354 aa22.6■■□□□ 1.21
CHRFAM7A-202ENST00000397827 NAP1L5Q96NT1 182 aaPredicted RBP22.6■■□□□ 1.21
CHRFAM7A-202ENST00000397827 EIF2S2P20042 333 aaKnown RBP22.6■■□□□ 1.21
CHRFAM7A-202ENST00000397827 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
CHRFAM7A-202ENST00000397827 CASC1Q6TDU7 716 aa22.59■■□□□ 1.21
CHRFAM7A-202ENST00000397827 ORAI2Q96SN7 254 aa22.58■■□□□ 1.2
CHRFAM7A-202ENST00000397827 USP44Q9H0E7 712 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 BABAM1Q9NWV8 329 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 CIZ1Q9ULV3 898 aaPredicted RBP22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 NFAT5O94916 1531 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 RRP9O43818 475 aaKnown RBP22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 ATP8B2P98198 1209 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 RAB3GAP1Q15042 981 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 LRRCC1Q9C099 1032 aa22.57■■□□□ 1.2
CHRFAM7A-202ENST00000397827 RABEP1Q15276 862 aa22.56■■□□□ 1.2
CHRFAM7A-202ENST00000397827 OSBPL3Q9H4L5 887 aa22.56■■□□□ 1.2
CHRFAM7A-202ENST00000397827 KCNQ3O43525 872 aa22.56■■□□□ 1.2
CHRFAM7A-202ENST00000397827 CEMIPQ8WUJ3 1361 aa22.56■■□□□ 1.2
CHRFAM7A-202ENST00000397827 LMOD2Q6P5Q4 547 aa22.55■■□□□ 1.2
CHRFAM7A-202ENST00000397827 ADGRL3Q9HAR2 1447 aa22.55■■□□□ 1.2
CHRFAM7A-202ENST00000397827 DDX11L8A8MPP1 907 aa22.55■■□□□ 1.2
CHRFAM7A-202ENST00000397827 KCNH5Q8NCM2 988 aa22.55■■□□□ 1.2
CHRFAM7A-202ENST00000397827 CACNA1FO60840 1977 aa22.55■■□□□ 1.2
CHRFAM7A-202ENST00000397827 SOS1Q07889 1333 aaPredicted RBP22.54■■□□□ 1.2
CHRFAM7A-202ENST00000397827 RGPD2P0DJD1 1756 aa22.54■■□□□ 1.2
CHRFAM7A-202ENST00000397827 EIF4A1P60842 406 aaKnown RBP22.54■■□□□ 1.2
CHRFAM7A-202ENST00000397827 UBTFL1P0CB47 393 aaPredicted RBP22.54■■□□□ 1.2
CHRFAM7A-202ENST00000397827 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
CHRFAM7A-202ENST00000397827 SALL3Q9BXA9 1300 aa22.53■■□□□ 1.2
CHRFAM7A-202ENST00000397827 ERC2O15083 957 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 ANXA1P04083 346 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 CHPF2Q9P2E5 772 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 REC8O95072 547 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 GCP02774 474 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 MX1P20591 662 aa22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 IBTKQ9P2D0 1353 aaPredicted RBP22.52■■□□□ 1.2
CHRFAM7A-202ENST00000397827 SSFA2P28290 1259 aa22.51■■□□□ 1.19
CHRFAM7A-202ENST00000397827 TEFQ10587 303 aa22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 GBP4Q96PP9 640 aa22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 L1TD1Q5T7N2 865 aaKnown RBP22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 IL1RAPL2Q9NP60 686 aa22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 BTBD11A6QL63 1104 aa22.5■■□□□ 1.19
CHRFAM7A-202ENST00000397827 RILPL2Q969X0 211 aa22.49■■□□□ 1.19
CHRFAM7A-202ENST00000397827 SRCIN1Q9C0H9 1055 aa22.49■■□□□ 1.19
CHRFAM7A-202ENST00000397827 AK9Q5TCS8 1911 aa22.49■■□□□ 1.19
CHRFAM7A-202ENST00000397827 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
CHRFAM7A-202ENST00000397827 PI4KAP2A4QPH2 592 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 TRIM6-TRIM34B2RNG4 842 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 PI4KAP1Q8N8J0 262 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 PXDNLA1KZ92 1463 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 NBPF7P0C2Y1 421 aaPredicted RBP22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 PPP1R42Q7Z4L9 355 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 ARHGEF25Q86VW2 580 aa22.48■■□□□ 1.19
CHRFAM7A-202ENST00000397827 ZNF142P52746 1687 aaPredicted RBP22.47■■□□□ 1.19
CHRFAM7A-202ENST00000397827 PLEKHO1Q53GL0 409 aaPredicted RBP22.47■■□□□ 1.19
CHRFAM7A-202ENST00000397827 FSD2A1L4K1 749 aa22.47■■□□□ 1.19
CHRFAM7A-202ENST00000397827 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHRFAM7A-202ENST00000397827 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
CHRFAM7A-202ENST00000397827 UNC5CLQ8IV45 518 aa22.46■■□□□ 1.19
CHRFAM7A-202ENST00000397827 SSH3Q8TE77 659 aa22.46■■□□□ 1.19
CHRFAM7A-202ENST00000397827 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
CHRFAM7A-202ENST00000397827 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.19
CHRFAM7A-202ENST00000397827 AXIN2Q9Y2T1 843 aa22.45■■□□□ 1.19
CHRFAM7A-202ENST00000397827 ST18O60284 1047 aa22.45■■□□□ 1.18
CHRFAM7A-202ENST00000397827 SURF6O75683 361 aaKnown RBP22.45■■□□□ 1.18
CHRFAM7A-202ENST00000397827 NUTM1Q86Y26 1132 aa22.45■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PXDNQ92626 1479 aa22.45■■□□□ 1.18
CHRFAM7A-202ENST00000397827 DNAAF4Q8WXU2 420 aa22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 ESYT1Q9BSJ8 1104 aa22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 N4BP2Q86UW6 1770 aaPredicted RBP22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 RNMTO43148 476 aaKnown RBP22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 SRGAP3O43295 1099 aa22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 BEND3Q5T5X7 828 aa22.44■■□□□ 1.18
CHRFAM7A-202ENST00000397827 PANK2Q9BZ23 570 aa22.43■■□□□ 1.18
CHRFAM7A-202ENST00000397827 KDM3BQ7LBC6 1761 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms