RNA–Protein interactions for RNA: ENST00000397459.6

CNTN4-201, Transcript of contactin 4, humanhuman

TSL 1 (best) BASIC

Gene CNTN4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-201ENST00000397459 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.81
CNTN4-201ENST00000397459 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.81
CNTN4-201ENST00000397459 CACNA1FO60840 1977 aa9.96□□□□□ -0.81
CNTN4-201ENST00000397459 USP6P35125 1406 aa9.96□□□□□ -0.81
CNTN4-201ENST00000397459 MSNP26038 577 aaKnown RBP9.96□□□□□ -0.82
CNTN4-201ENST00000397459 ZMYND15Q9H091 742 aa9.96□□□□□ -0.82
CNTN4-201ENST00000397459 PHF14O94880 888 aa9.95□□□□□ -0.82
CNTN4-201ENST00000397459 GNAI3P08754 354 aa9.95□□□□□ -0.82
CNTN4-201ENST00000397459 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
CNTN4-201ENST00000397459 MAP7D2Q96T17 732 aa9.95□□□□□ -0.82
CNTN4-201ENST00000397459 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
CNTN4-201ENST00000397459 NPHP4O75161 1426 aaPredicted RBP9.95□□□□□ -0.82
CNTN4-201ENST00000397459 SSFA2P28290 1259 aa9.95□□□□□ -0.82
CNTN4-201ENST00000397459 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
CNTN4-201ENST00000397459 RRS1Q15050 365 aaKnown RBP9.94□□□□□ -0.82
CNTN4-201ENST00000397459 SDSP20132 328 aa9.94□□□□□ -0.82
CNTN4-201ENST00000397459 MTERF4Q7Z6M4 381 aaKnown RBP9.94□□□□□ -0.82
CNTN4-201ENST00000397459 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
CNTN4-201ENST00000397459 MSH6P52701 1360 aa9.94□□□□□ -0.82
CNTN4-201ENST00000397459 CRB1P82279 1406 aa9.94□□□□□ -0.82
CNTN4-201ENST00000397459 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
CNTN4-201ENST00000397459 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
CNTN4-201ENST00000397459 PDLIM2Q96JY6 352 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 LMBRD1Q9NUN5 540 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 KDRP35968 1356 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 ANKARQ7Z5J8 1434 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 LRRC37A3O60309 1634 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 FMN2Q9NZ56 1722 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 ZNF500O60304 480 aaPredicted RBP9.93□□□□□ -0.82
CNTN4-201ENST00000397459 GNAI2P04899 355 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 GAS2L3Q86XJ1 694 aa9.93□□□□□ -0.82
CNTN4-201ENST00000397459 RTF1Q92541 710 aaKnown RBP9.93□□□□□ -0.82
CNTN4-201ENST00000397459 USP54Q70EL1 1684 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 OFD1O75665 1012 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
CNTN4-201ENST00000397459 CUL4AQ13619 759 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
CNTN4-201ENST00000397459 HSP90AA2PQ14568 343 aaPredicted RBP9.92□□□□□ -0.82
CNTN4-201ENST00000397459 FAM184AQ8NB25 1140 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
CNTN4-201ENST00000397459 STK31Q9BXU1 1019 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 FLT4P35916 1363 aa9.92□□□□□ -0.82
CNTN4-201ENST00000397459 LETM1O95202 739 aaPredicted RBP9.91□□□□□ -0.82
CNTN4-201ENST00000397459 TAF7LQ5H9L4 462 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 STAP2Q9UGK3 403 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 NOL7Q9UMY1 257 aaKnown RBP9.91□□□□□ -0.82
CNTN4-201ENST00000397459 NCLP19338 710 aaKnown RBP9.91□□□□□ -0.82
CNTN4-201ENST00000397459 PDE1AP54750 535 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 ZSCAN23Q3MJ62 389 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 MCTP1Q6DN14 999 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 LRSAM1Q6UWE0 723 aa9.91□□□□□ -0.82
CNTN4-201ENST00000397459 RAB11FIP3O75154 756 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 UVSSAQ2YD98 709 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 CCDC30Q5VVM6 783 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 SULT6B1Q6IMI4 303 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 LRRCC1Q9C099 1032 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 TUBGCP6Q96RT7 1819 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
CNTN4-201ENST00000397459 SALL3Q9BXA9 1300 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 FAM208AQ9UK61 1670 aaKnown RBP9.89□□□□□ -0.83
CNTN4-201ENST00000397459 ELL2O00472 640 aaPredicted RBP9.89□□□□□ -0.83
CNTN4-201ENST00000397459 ESYT1Q9BSJ8 1104 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 ADGRL3Q9HAR2 1447 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 SOX12O15370 315 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 BRD1O95696 1058 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
CNTN4-201ENST00000397459 PDCL3Q9H2J4 239 aa9.89□□□□□ -0.83
CNTN4-201ENST00000397459 WDR33Q9C0J8 1336 aaKnown RBP9.88□□□□□ -0.83
CNTN4-201ENST00000397459 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 HOXB7P09629 217 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 ATP8B2P98198 1209 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 HSP90AB4PQ58FF6 505 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 CAVIN1Q6NZI2 390 aaKnown RBP9.88□□□□□ -0.83
CNTN4-201ENST00000397459 ATP6V1DQ9Y5K8 247 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 PIK3C2AO00443 1686 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
CNTN4-201ENST00000397459 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 MEIS3Q99687 375 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
CNTN4-201ENST00000397459 IGSF1Q8N6C5 1336 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 NWD1Q149M9 1564 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 MX1P20591 662 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 FAM83GA6ND36 823 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 ZKSCAN5Q9Y2L8 839 aa9.87□□□□□ -0.83
CNTN4-201ENST00000397459 MAP3K19Q56UN5 1328 aa9.86□□□□□ -0.83
CNTN4-201ENST00000397459 NLRP6P59044 892 aa9.86□□□□□ -0.83
CNTN4-201ENST00000397459 NUTM2GQ5VZR2 741 aa9.86□□□□□ -0.83
CNTN4-201ENST00000397459 TMX3Q96JJ7 454 aa9.86□□□□□ -0.83
CNTN4-201ENST00000397459 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
CNTN4-201ENST00000397459 NEK4P51957 841 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
CNTN4-201ENST00000397459 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
CNTN4-201ENST00000397459 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms