RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SIPA1L3O60292 1781 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-202ENST00000397396 TSR2Q969E8 191 aaKnown RBP30.52■■■□□ 2.48
TSPAN4-202ENST00000397396 SEPT12Q8IYM1 358 aa30.51■■■□□ 2.48
TSPAN4-202ENST00000397396 BTBD11A6QL63 1104 aa30.5■■■□□ 2.47
TSPAN4-202ENST00000397396 MARCH10Q8NA82 808 aaPredicted RBP30.49■■■□□ 2.47
TSPAN4-202ENST00000397396 RXRBP28702 533 aa30.48■■■□□ 2.47
TSPAN4-202ENST00000397396 KDM3BQ7LBC6 1761 aa30.48■■■□□ 2.47
TSPAN4-202ENST00000397396 BCL9O00512 1426 aa30.47■■■□□ 2.47
TSPAN4-202ENST00000397396 TMOD3Q9NYL9 352 aa30.47■■■□□ 2.47
TSPAN4-202ENST00000397396 SOS1Q07889 1333 aaPredicted RBP30.46■■■□□ 2.47
TSPAN4-202ENST00000397396 TOGARAM1Q9Y4F4 1720 aa30.46■■■□□ 2.47
TSPAN4-202ENST00000397396 NFATC2IPQ8NCF5 419 aa30.46■■■□□ 2.47
TSPAN4-202ENST00000397396 EXOSC9Q06265 439 aaKnown RBP30.45■■■□□ 2.46
TSPAN4-202ENST00000397396 ZNF428Q96B54 188 aa30.45■■■□□ 2.46
TSPAN4-202ENST00000397396 DOT1LQ8TEK3 1739 aa30.43■■■□□ 2.46
TSPAN4-202ENST00000397396 TTC5Q8N0Z6 440 aa30.42■■■□□ 2.46
TSPAN4-202ENST00000397396 CHMP4AQ9BY43 222 aa30.42■■■□□ 2.46
TSPAN4-202ENST00000397396 MIS18AQ9NYP9 233 aa30.42■■■□□ 2.46
TSPAN4-202ENST00000397396 RGS17Q9UGC6 210 aaPredicted RBP30.42■■■□□ 2.46
TSPAN4-202ENST00000397396 RCAN3Q9UKA8 241 aa30.41■■■□□ 2.46
TSPAN4-202ENST00000397396 ZNF790Q6PG37 636 aa30.4■■■□□ 2.46
TSPAN4-202ENST00000397396 PAPPAQ13219 1627 aa30.38■■■□□ 2.45
TSPAN4-202ENST00000397396 ITGB4P16144 1822 aa30.38■■■□□ 2.45
TSPAN4-202ENST00000397396 HOXB7P09629 217 aa30.38■■■□□ 2.45
TSPAN4-202ENST00000397396 TWISTNBQ3B726 338 aaPredicted RBP30.38■■■□□ 2.45
TSPAN4-202ENST00000397396 KRT27Q7Z3Y8 459 aa30.38■■■□□ 2.45
TSPAN4-202ENST00000397396 EIF4A1P60842 406 aaKnown RBP30.37■■■□□ 2.45
TSPAN4-202ENST00000397396 PRIM1P49642 420 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-202ENST00000397396 POTEAQ6S8J7 498 aa30.35■■■□□ 2.45
TSPAN4-202ENST00000397396 SYTL4Q96C24 671 aaPredicted RBP30.35■■■□□ 2.45
TSPAN4-202ENST00000397396 PIGBQ92521 554 aa30.34■■■□□ 2.45
TSPAN4-202ENST00000397396 RGS12O14924 1447 aa30.33■■■□□ 2.45
TSPAN4-202ENST00000397396 C8orf58Q8NAV2 365 aa30.33■■■□□ 2.45
TSPAN4-202ENST00000397396 FMNL2Q96PY5 1086 aa30.33■■■□□ 2.45
TSPAN4-202ENST00000397396 ALDH1L2Q3SY69 923 aa30.32■■■□□ 2.44
TSPAN4-202ENST00000397396 NHSQ6T4R5 1651 aa30.32■■■□□ 2.44
TSPAN4-202ENST00000397396 BRWD3Q6RI45 1802 aa30.31■■■□□ 2.44
TSPAN4-202ENST00000397396 VAMP4O75379 141 aa30.31■■■□□ 2.44
TSPAN4-202ENST00000397396 SLC39A6Q13433 755 aa30.31■■■□□ 2.44
TSPAN4-202ENST00000397396 FAM196AQ6ZSG2 479 aa30.31■■■□□ 2.44
TSPAN4-202ENST00000397396 HEG1Q9ULI3 1381 aa30.31■■■□□ 2.44
TSPAN4-202ENST00000397396 UBR2Q8IWV8 1755 aa30.3■■■□□ 2.44
TSPAN4-202ENST00000397396 TSPYL6Q8N831 410 aa30.3■■■□□ 2.44
TSPAN4-202ENST00000397396 ACSBG1Q96GR2 724 aa30.3■■■□□ 2.44
TSPAN4-202ENST00000397396 KCNQ3O43525 872 aa30.29■■■□□ 2.44
TSPAN4-202ENST00000397396 RARSP54136 660 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-202ENST00000397396 ELL2O00472 640 aaPredicted RBP30.28■■■□□ 2.44
TSPAN4-202ENST00000397396 SMARCC1Q92922 1105 aaPredicted RBP30.28■■■□□ 2.44
TSPAN4-202ENST00000397396 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.27■■■□□ 2.44
TSPAN4-202ENST00000397396 KCPQ6ZWJ8 1503 aa30.27■■■□□ 2.44
TSPAN4-202ENST00000397396 SNRPA1P09661 255 aaKnown RBP30.26■■■□□ 2.44
TSPAN4-202ENST00000397396 KRT24Q2M2I5 525 aa30.26■■■□□ 2.44
TSPAN4-202ENST00000397396 ZNF496Q96IT1 587 aaPredicted RBP30.26■■■□□ 2.44
TSPAN4-202ENST00000397396 KAT6BQ8WYB5 2073 aa30.26■■■□□ 2.43
TSPAN4-202ENST00000397396 GIGYF1O75420 1035 aaPredicted RBP30.25■■■□□ 2.43
TSPAN4-202ENST00000397396 CCDC30Q5VVM6 783 aa30.25■■■□□ 2.43
TSPAN4-202ENST00000397396 ATG3Q9NT62 314 aa30.25■■■□□ 2.43
TSPAN4-202ENST00000397396 VSIG10Q8N0Z9 540 aa30.24■■■□□ 2.43
TSPAN4-202ENST00000397396 SMC4Q9NTJ3 1288 aa30.24■■■□□ 2.43
TSPAN4-202ENST00000397396 ASAP1Q9ULH1 1129 aa30.23■■■□□ 2.43
TSPAN4-202ENST00000397396 STK31Q9BXU1 1019 aa30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 SUPT16HQ9Y5B9 1047 aaKnown RBP30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 KIF16BQ96L93 1317 aa30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 SBF2Q86WG5 1849 aa30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 BRPF1P55201 1214 aaPredicted RBP30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 HDGFL1Q5TGJ6 251 aa30.22■■■□□ 2.43
TSPAN4-202ENST00000397396 RNF123Q5XPI4 1314 aa30.21■■■□□ 2.43
TSPAN4-202ENST00000397396 SSH1Q8WYL5 1049 aa30.21■■■□□ 2.43
TSPAN4-202ENST00000397396 TEX13AQ9BXU3 409 aaPredicted RBP30.21■■■□□ 2.43
TSPAN4-202ENST00000397396 BCL11BQ9C0K0 894 aaPredicted RBP30.21■■■□□ 2.43
TSPAN4-202ENST00000397396 LAMB4A4D0S4 1761 aa30.2■■■□□ 2.42
TSPAN4-202ENST00000397396 KCNQ2O43526 872 aa30.2■■■□□ 2.42
TSPAN4-202ENST00000397396 FAM182BQ5T319 152 aa30.2■■■□□ 2.42
TSPAN4-202ENST00000397396 PTCD1O75127 700 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-202ENST00000397396 RRP1P56182 461 aaKnown RBP30.19■■■□□ 2.42
TSPAN4-202ENST00000397396 PALLDQ8WX93 1383 aa30.19■■■□□ 2.42
TSPAN4-202ENST00000397396 BTAF1O14981 1849 aa30.17■■■□□ 2.42
TSPAN4-202ENST00000397396 BCAR3O75815 825 aa30.17■■■□□ 2.42
TSPAN4-202ENST00000397396 RBM42Q9BTD8 480 aaKnown RBP30.17■■■□□ 2.42
TSPAN4-202ENST00000397396 ERBB4Q15303 1308 aa30.16■■■□□ 2.42
TSPAN4-202ENST00000397396 CANXP27824 592 aaKnown RBP30.16■■■□□ 2.42
TSPAN4-202ENST00000397396 C5P01031 1676 aa30.16■■■□□ 2.42
TSPAN4-202ENST00000397396 IPO8O15397 1037 aaKnown RBP30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 NEFLP07196 543 aa30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 EIF2S2P20042 333 aaKnown RBP30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 MRPL50Q8N5N7 158 aaKnown RBP30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 BCL2L13Q9BXK5 485 aa30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 CICQ96RK0 1608 aaPredicted RBP30.15■■■□□ 2.42
TSPAN4-202ENST00000397396 DBF4Q9UBU7 674 aaPredicted RBP30.14■■■□□ 2.42
TSPAN4-202ENST00000397396 CACNA1FO60840 1977 aa30.13■■■□□ 2.41
TSPAN4-202ENST00000397396 ZNF831Q5JPB2 1677 aa30.13■■■□□ 2.41
TSPAN4-202ENST00000397396 MS4A1P11836 297 aa30.12■■■□□ 2.41
TSPAN4-202ENST00000397396 LOC102724428A0A0B4J2F2 783 aa30.11■■■□□ 2.41
TSPAN4-202ENST00000397396 STARD3NLO95772 234 aa30.11■■■□□ 2.41
TSPAN4-202ENST00000397396 SIK1P57059 783 aa30.11■■■□□ 2.41
TSPAN4-202ENST00000397396 SLC4A2P04920 1241 aa30.1■■■□□ 2.41
TSPAN4-202ENST00000397396 HMGB2P26583 209 aaKnown RBP30.1■■■□□ 2.41
TSPAN4-202ENST00000397396 ZKSCAN2Q63HK3 967 aa30.1■■■□□ 2.41
TSPAN4-202ENST00000397396 ARHGAP45Q92619 1136 aa30.1■■■□□ 2.41
TSPAN4-202ENST00000397396 FRAT1Q92837 279 aaPredicted RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms