RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 GTF2F1P35269 517 aaKnown RBP eCLIP11.28□□□□□ -0.6
UCA1-201ENST00000397381 NME9Q86XW9 330 aa11.28□□□□□ -0.6
UCA1-201ENST00000397381 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
UCA1-201ENST00000397381 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
UCA1-201ENST00000397381 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
UCA1-201ENST00000397381 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 RIMBP3CA6NJZ7 1639 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 RIMBP3BA6NNM3 1639 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 RIMBP3Q9UFD9 1639 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 AOX1Q06278 1338 aa11.27□□□□□ -0.61
UCA1-201ENST00000397381 GNAI2P04899 355 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 CHMLP26374 656 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.61
UCA1-201ENST00000397381 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
UCA1-201ENST00000397381 SPTLC3Q9NUV7 552 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 LRRCC1Q9C099 1032 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 ANO2Q9NQ90 1003 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 STAP2Q9UGK3 403 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 ARHGEF10O15013 1369 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 AKAP12Q02952 1782 aa11.26□□□□□ -0.61
UCA1-201ENST00000397381 SETD1AO15047 1707 aaKnown RBP11.25□□□□□ -0.61
UCA1-201ENST00000397381 C3P01024 1663 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
UCA1-201ENST00000397381 GADD45BO75293 160 aaPredicted RBP11.25□□□□□ -0.61
UCA1-201ENST00000397381 SLC4A2P04920 1241 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 MX1P20591 662 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 CPS1P31327 1500 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 TPM3P06753 285 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
UCA1-201ENST00000397381 RPAP1Q9BWH6 1393 aaPredicted RBP11.25□□□□□ -0.61
UCA1-201ENST00000397381 ADCY5O95622 1261 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 CRB1P82279 1406 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 WAPLQ7Z5K2 1190 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 GNAI3P08754 354 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 FKBP5Q13451 457 aaPredicted RBP11.24□□□□□ -0.61
UCA1-201ENST00000397381 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
UCA1-201ENST00000397381 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
UCA1-201ENST00000397381 UBE2HP62256 183 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 DMTNQ08495 405 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 USP25Q9UHP3 1055 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 TRIM6-TRIM34B2RNG4 842 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 KDM4AO75164 1064 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 HSPA4P34932 840 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
UCA1-201ENST00000397381 MCM10Q7L590 875 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 EXOC6BQ9Y2D4 811 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
UCA1-201ENST00000397381 RGPD1P0DJD0 1748 aa11.22□□□□□ -0.61
UCA1-201ENST00000397381 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
UCA1-201ENST00000397381 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
UCA1-201ENST00000397381 NOL8Q76FK4 1167 aaKnown RBP11.22□□□□□ -0.61
UCA1-201ENST00000397381 GDPD2Q9HCC8 539 aa11.22□□□□□ -0.61
UCA1-201ENST00000397381 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
UCA1-201ENST00000397381 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
UCA1-201ENST00000397381 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
UCA1-201ENST00000397381 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
UCA1-201ENST00000397381 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.61
UCA1-201ENST00000397381 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
UCA1-201ENST00000397381 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
UCA1-201ENST00000397381 SPATA31D1Q6ZQQ2 1576 aa11.21□□□□□ -0.61
UCA1-201ENST00000397381 TCHHQ07283 1943 aa11.21□□□□□ -0.61
UCA1-201ENST00000397381 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.62
UCA1-201ENST00000397381 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.62
UCA1-201ENST00000397381 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.62
UCA1-201ENST00000397381 TSHZ3Q63HK5 1081 aa11.2□□□□□ -0.62
UCA1-201ENST00000397381 G2E3Q7L622 706 aa11.2□□□□□ -0.62
UCA1-201ENST00000397381 ZNF830Q96NB3 372 aaPredicted RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 GTPBP4Q9BZE4 634 aaKnown RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 TTC12Q9H892 705 aaPredicted RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 HCLS1P14317 486 aaPredicted RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 SIRT1Q96EB6 747 aa11.2□□□□□ -0.62
UCA1-201ENST00000397381 STK31Q9BXU1 1019 aa11.2□□□□□ -0.62
UCA1-201ENST00000397381 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
UCA1-201ENST00000397381 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
UCA1-201ENST00000397381 GOLGA6L6A8MZA4 724 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 F6X3S4 739 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
UCA1-201ENST00000397381 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
UCA1-201ENST00000397381 ARID3AQ99856 593 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 FUCA2Q9BTY2 467 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 A2ML1A8K2U0 1454 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 TTC21BQ7Z4L5 1316 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 RAD50Q92878 1312 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 STX6O43752 255 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 F13A1P00488 732 aa11.19□□□□□ -0.62
UCA1-201ENST00000397381 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
UCA1-201ENST00000397381 KIAA1524Q8TCG1 905 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms