RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
CCNF-202ENST00000397066 NUTM1Q86Y26 1132 aa17.79■□□□□ 0.44
CCNF-202ENST00000397066 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
CCNF-202ENST00000397066 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
CCNF-202ENST00000397066 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
CCNF-202ENST00000397066 ATP7BP35670 1465 aa17.78■□□□□ 0.44
CCNF-202ENST00000397066 PIK3C2BO00750 1634 aa17.78■□□□□ 0.44
CCNF-202ENST00000397066 CHMLP26374 656 aa17.78■□□□□ 0.44
CCNF-202ENST00000397066 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
CCNF-202ENST00000397066 GADD45BO75293 160 aaPredicted RBP17.78■□□□□ 0.44
CCNF-202ENST00000397066 FIBPO43427 364 aa17.77■□□□□ 0.44
CCNF-202ENST00000397066 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
CCNF-202ENST00000397066 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
CCNF-202ENST00000397066 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
CCNF-202ENST00000397066 ARHGAP31Q2M1Z3 1444 aa17.77■□□□□ 0.44
CCNF-202ENST00000397066 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.44
CCNF-202ENST00000397066 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
CCNF-202ENST00000397066 CDK12Q9NYV4 1490 aaPredicted RBP17.77■□□□□ 0.43
CCNF-202ENST00000397066 YEATS2Q9ULM3 1422 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
CCNF-202ENST00000397066 SMC3Q9UQE7 1217 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCNF-202ENST00000397066 AATKQ6ZMQ8 1374 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 DYNC1I1O14576 645 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 ANAPC15P60006 121 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 FLIIQ13045 1269 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 INTS4Q96HW7 963 aaKnown RBP17.76■□□□□ 0.43
CCNF-202ENST00000397066 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
CCNF-202ENST00000397066 MTERF4Q7Z6M4 381 aaKnown RBP17.75■□□□□ 0.43
CCNF-202ENST00000397066 OSBPL3Q9H4L5 887 aa17.75■□□□□ 0.43
CCNF-202ENST00000397066 KIAA0232Q92628 1395 aa17.75■□□□□ 0.43
CCNF-202ENST00000397066 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
CCNF-202ENST00000397066 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.75■□□□□ 0.43
CCNF-202ENST00000397066 KCNJ4P48050 445 aa17.75■□□□□ 0.43
CCNF-202ENST00000397066 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
CCNF-202ENST00000397066 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
CCNF-202ENST00000397066 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
CCNF-202ENST00000397066 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
CCNF-202ENST00000397066 ATP6V1DQ9Y5K8 247 aa17.74■□□□□ 0.43
CCNF-202ENST00000397066 CNPY2Q9Y2B0 182 aa17.74■□□□□ 0.43
CCNF-202ENST00000397066 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
CCNF-202ENST00000397066 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
CCNF-202ENST00000397066 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
CCNF-202ENST00000397066 HCLS1P14317 486 aaPredicted RBP17.73■□□□□ 0.43
CCNF-202ENST00000397066 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
CCNF-202ENST00000397066 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
CCNF-202ENST00000397066 ADCY5O95622 1261 aa17.72■□□□□ 0.43
CCNF-202ENST00000397066 EIF2S2P20042 333 aaKnown RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
CCNF-202ENST00000397066 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
CCNF-202ENST00000397066 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 CUL4AQ13619 759 aa17.72■□□□□ 0.43
CCNF-202ENST00000397066 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
CCNF-202ENST00000397066 VPS37CA5D8V6 355 aaPredicted RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 TTC12Q9H892 705 aaPredicted RBP17.72■□□□□ 0.43
CCNF-202ENST00000397066 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
CCNF-202ENST00000397066 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 ANKRD26Q9UPS8 1709 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 ACEP12821 1306 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 KIF20BQ96Q89 1820 aa17.71■□□□□ 0.43
CCNF-202ENST00000397066 LETM1O95202 739 aaPredicted RBP17.7■□□□□ 0.42
CCNF-202ENST00000397066 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
CCNF-202ENST00000397066 GOLGA6L4A6NEF3 574 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 DTNBO60941 627 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 DRC7Q8IY82 874 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 C17orf53Q8N3J3 647 aaPredicted RBP17.69■□□□□ 0.42
CCNF-202ENST00000397066 SPC24Q8NBT2 197 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 STX6O43752 255 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
CCNF-202ENST00000397066 ZSCAN22P10073 491 aaPredicted RBP17.68■□□□□ 0.42
CCNF-202ENST00000397066 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
CCNF-202ENST00000397066 NOLC1Q14978 699 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCNF-202ENST00000397066 CASTP20810 708 aaKnown RBP17.68■□□□□ 0.42
CCNF-202ENST00000397066 UVSSAQ2YD98 709 aa17.68■□□□□ 0.42
CCNF-202ENST00000397066 RGS12O14924 1447 aa17.68■□□□□ 0.42
CCNF-202ENST00000397066 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
CCNF-202ENST00000397066 NEO1Q92859 1461 aa17.68■□□□□ 0.42
CCNF-202ENST00000397066 MAP3K19Q56UN5 1328 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 GIMAP6Q6P9H5 292 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 METP08581 1390 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 CCDC83Q8IWF9 413 aa17.67■□□□□ 0.42
CCNF-202ENST00000397066 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
CCNF-202ENST00000397066 UBE2HP62256 183 aa17.66■□□□□ 0.42
CCNF-202ENST00000397066 TSC1Q92574 1164 aa17.66■□□□□ 0.42
CCNF-202ENST00000397066 GOLGA6L6A8MZA4 724 aa17.66■□□□□ 0.42
CCNF-202ENST00000397066 AK2P54819 239 aa17.66■□□□□ 0.42
CCNF-202ENST00000397066 CPA1P15085 419 aa17.66■□□□□ 0.42
CCNF-202ENST00000397066 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
CCNF-202ENST00000397066 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
CCNF-202ENST00000397066 SYT1P21579 422 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms