RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
MCF2L-205ENST00000397017 ACSBG1Q96GR2 724 aa18.66■□□□□ 0.58
MCF2L-205ENST00000397017 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
MCF2L-205ENST00000397017 CDC45O75419 566 aa18.65■□□□□ 0.58
MCF2L-205ENST00000397017 DEKP35659 375 aaKnown RBP18.65■□□□□ 0.58
MCF2L-205ENST00000397017 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
MCF2L-205ENST00000397017 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
MCF2L-205ENST00000397017 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
MCF2L-205ENST00000397017 ZCRB1Q8TBF4 217 aaKnown RBP18.65■□□□□ 0.58
MCF2L-205ENST00000397017 NGLY1Q96IV0 654 aa18.64■□□□□ 0.57
MCF2L-205ENST00000397017 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
MCF2L-205ENST00000397017 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
MCF2L-205ENST00000397017 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 GPTP24298 496 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 PPP1R42Q7Z4L9 355 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 OTUD7AQ8TE49 926 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-205ENST00000397017 CPS1P31327 1500 aa18.63■□□□□ 0.57
MCF2L-205ENST00000397017 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
MCF2L-205ENST00000397017 INTS3Q68E01 1043 aaKnown RBP18.62■□□□□ 0.57
MCF2L-205ENST00000397017 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-205ENST00000397017 PTPRCP08575 1304 aa18.62■□□□□ 0.57
MCF2L-205ENST00000397017 C8orf34Q49A92 452 aa18.62■□□□□ 0.57
MCF2L-205ENST00000397017 GOLGA6L22H0YM25 854 aa18.61■□□□□ 0.57
MCF2L-205ENST00000397017 DNAJC2Q99543 621 aaKnown RBP18.61■□□□□ 0.57
MCF2L-205ENST00000397017 UBE3BQ7Z3V4 1068 aa18.61■□□□□ 0.57
MCF2L-205ENST00000397017 ARHGAP45Q92619 1136 aa18.61■□□□□ 0.57
MCF2L-205ENST00000397017 SIGLEC1Q9BZZ2 1709 aa18.61■□□□□ 0.57
MCF2L-205ENST00000397017 FMNL2Q96PY5 1086 aa18.61■□□□□ 0.57
MCF2L-205ENST00000397017 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
MCF2L-205ENST00000397017 LAMC1P11047 1609 aa18.6■□□□□ 0.57
MCF2L-205ENST00000397017 USP19O94966 1318 aa18.6■□□□□ 0.57
MCF2L-205ENST00000397017 AACSQ86V21 672 aa18.6■□□□□ 0.57
MCF2L-205ENST00000397017 CCDC8Q9H0W5 538 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-205ENST00000397017 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
MCF2L-205ENST00000397017 EXOC5O00471 708 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 REC8O95072 547 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 A0A087WZG4 1122 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 CPSF1Q10570 1443 aaKnown RBP18.59■□□□□ 0.57
MCF2L-205ENST00000397017 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 PPLO60437 1756 aa18.59■□□□□ 0.57
MCF2L-205ENST00000397017 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-205ENST00000397017 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-205ENST00000397017 C8orf37Q96NL8 207 aa18.58■□□□□ 0.57
MCF2L-205ENST00000397017 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-205ENST00000397017 LMTK3Q96Q04 1460 aa18.57■□□□□ 0.56
MCF2L-205ENST00000397017 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
MCF2L-205ENST00000397017 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
MCF2L-205ENST00000397017 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
MCF2L-205ENST00000397017 NUCB1Q02818 461 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 MYO5BQ9ULV0 1848 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 ST18O60284 1047 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
MCF2L-205ENST00000397017 IL2RBP14784 551 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 HSP90AB4PQ58FF6 505 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 KIF6Q6ZMV9 814 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 FSD1Q9BTV5 496 aa18.56■□□□□ 0.56
MCF2L-205ENST00000397017 PHF23Q9BUL5 403 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-205ENST00000397017 CWC27Q6UX04 472 aaKnown RBP18.55■□□□□ 0.56
MCF2L-205ENST00000397017 ANKRD13DQ6ZTN6 518 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
MCF2L-205ENST00000397017 NBPF7P0C2Y1 421 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-205ENST00000397017 ANKRD44Q8N8A2 993 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 HYPKQ9NX55 129 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 NEK4P51957 841 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
MCF2L-205ENST00000397017 MX1P20591 662 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
MCF2L-205ENST00000397017 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 KLHDC4Q8TBB5 520 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 BOLA2Q9H3K6 86 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 USP16Q9Y5T5 823 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 ARHGEF10O15013 1369 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 A1BGP04217 495 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 NFKBIBQ15653 356 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
MCF2L-205ENST00000397017 PNMA6EA0A0J9YXQ4 647 aa18.53■□□□□ 0.56
MCF2L-205ENST00000397017 SMC5Q8IY18 1101 aa18.53■□□□□ 0.56
MCF2L-205ENST00000397017 PNPLA6Q8IY17 1366 aa18.53■□□□□ 0.56
MCF2L-205ENST00000397017 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
MCF2L-205ENST00000397017 TOMM22Q9NS69 142 aa18.53■□□□□ 0.56
MCF2L-205ENST00000397017 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
MCF2L-205ENST00000397017 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-205ENST00000397017 ERC2O15083 957 aa18.52■□□□□ 0.55
MCF2L-205ENST00000397017 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.55
MCF2L-205ENST00000397017 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.55
MCF2L-205ENST00000397017 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
MCF2L-205ENST00000397017 HSP90B1P14625 803 aaKnown RBP18.51■□□□□ 0.55
MCF2L-205ENST00000397017 MYO3AQ8NEV4 1616 aa18.51■□□□□ 0.55
MCF2L-205ENST00000397017 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
MCF2L-205ENST00000397017 ERBB3P21860 1342 aa18.5■□□□□ 0.55
MCF2L-205ENST00000397017 STARD3NLO95772 234 aa18.5■□□□□ 0.55
MCF2L-205ENST00000397017 CDK12Q9NYV4 1490 aaPredicted RBP18.5■□□□□ 0.55
MCF2L-205ENST00000397017 KSR2Q6VAB6 950 aa18.5■□□□□ 0.55
MCF2L-205ENST00000397017 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms