RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ATG3Q9NT62 314 aa38.77■■■■□ 3.8
CHCHD4-202ENST00000396914 KCNQ4P56696 695 aa38.76■■■■□ 3.8
CHCHD4-202ENST00000396914 RIPK4P57078 832 aa38.76■■■■□ 3.8
CHCHD4-202ENST00000396914 DCTN1Q14203 1278 aa38.76■■■■□ 3.8
CHCHD4-202ENST00000396914 CCNL1Q9UK58 526 aaPredicted RBP38.76■■■■□ 3.8
CHCHD4-202ENST00000396914 RRP7AQ9Y3A4 280 aaKnown RBP38.76■■■■□ 3.8
CHCHD4-202ENST00000396914 NUP188Q5SRE5 1749 aa38.75■■■■□ 3.79
CHCHD4-202ENST00000396914 ADAMTS7Q9UKP4 1686 aa38.75■■■■□ 3.79
CHCHD4-202ENST00000396914 HTATSF1O43719 755 aaKnown RBP38.75■■■■□ 3.79
CHCHD4-202ENST00000396914 NBPF14Q5TI25 921 aa38.75■■■■□ 3.79
CHCHD4-202ENST00000396914 SLC27A3Q5K4L6 730 aa38.74■■■■□ 3.79
CHCHD4-202ENST00000396914 DLG5Q8TDM6 1919 aa38.74■■■■□ 3.79
CHCHD4-202ENST00000396914 TMPOP42166 694 aaKnown RBP38.73■■■■□ 3.79
CHCHD4-202ENST00000396914 LY75O60449 1722 aa38.73■■■■□ 3.79
CHCHD4-202ENST00000396914 MRC1P22897 1456 aa38.73■■■■□ 3.79
CHCHD4-202ENST00000396914 FAM9BQ8IZU0 186 aa38.72■■■■□ 3.79
CHCHD4-202ENST00000396914 RBM42Q9BTD8 480 aaKnown RBP38.72■■■■□ 3.79
CHCHD4-202ENST00000396914 LRRC4BQ9NT99 713 aa38.71■■■■□ 3.79
CHCHD4-202ENST00000396914 CEMIPQ8WUJ3 1361 aa38.7■■■■□ 3.79
CHCHD4-202ENST00000396914 LOC102724428A0A0B4J2F2 783 aa38.67■■■■□ 3.78
CHCHD4-202ENST00000396914 PTCD1O75127 700 aaKnown RBP38.67■■■■□ 3.78
CHCHD4-202ENST00000396914 SIK1P57059 783 aa38.67■■■■□ 3.78
CHCHD4-202ENST00000396914 LMOD3Q0VAK6 560 aa38.67■■■■□ 3.78
CHCHD4-202ENST00000396914 SLC39A6Q13433 755 aa38.67■■■■□ 3.78
CHCHD4-202ENST00000396914 APAF1O14727 1248 aa38.66■■■■□ 3.78
CHCHD4-202ENST00000396914 TTC5Q8N0Z6 440 aa38.64■■■■□ 3.78
CHCHD4-202ENST00000396914 THUMPD2Q9BTF0 503 aaKnown RBP38.64■■■■□ 3.78
CHCHD4-202ENST00000396914 STK32BQ9NY57 414 aa38.64■■■■□ 3.78
CHCHD4-202ENST00000396914 PSDA5PKW4 1024 aaPredicted RBP38.63■■■■□ 3.78
CHCHD4-202ENST00000396914 CCER2I3L3R5 266 aa38.63■■■■□ 3.78
CHCHD4-202ENST00000396914 ATP6V1AP38606 617 aa38.63■■■■□ 3.78
CHCHD4-202ENST00000396914 R3HDM1Q15032 1099 aaKnown RBP38.63■■■■□ 3.78
CHCHD4-202ENST00000396914 MIER1Q8N108 512 aa38.63■■■■□ 3.78
CHCHD4-202ENST00000396914 BTBD11A6QL63 1104 aa38.63■■■■□ 3.77
CHCHD4-202ENST00000396914 ANO8Q9HCE9 1232 aaPredicted RBP38.62■■■■□ 3.77
CHCHD4-202ENST00000396914 SENP3-EIF4A1A0A087X0R7 540 aa38.6■■■■□ 3.77
CHCHD4-202ENST00000396914 SIPA1L3O60292 1781 aaPredicted RBP38.59■■■■□ 3.77
CHCHD4-202ENST00000396914 TAF7Q15545 349 aaPredicted RBP38.58■■■■□ 3.77
CHCHD4-202ENST00000396914 HMGB2P26583 209 aaKnown RBP38.57■■■■□ 3.77
CHCHD4-202ENST00000396914 PAPPAQ13219 1627 aa38.56■■■■□ 3.76
CHCHD4-202ENST00000396914 C5P01031 1676 aa38.56■■■■□ 3.76
CHCHD4-202ENST00000396914 SLC15A2Q16348 729 aa38.55■■■■□ 3.76
CHCHD4-202ENST00000396914 ZNF790Q6PG37 636 aa38.55■■■■□ 3.76
CHCHD4-202ENST00000396914 ITPK1Q13572 414 aa38.54■■■■□ 3.76
CHCHD4-202ENST00000396914 ZNF827Q17R98 1081 aa38.54■■■■□ 3.76
CHCHD4-202ENST00000396914 SLC4A9Q96Q91 983 aa38.54■■■■□ 3.76
CHCHD4-202ENST00000396914 MIS18AQ9NYP9 233 aa38.54■■■■□ 3.76
CHCHD4-202ENST00000396914 TRIM35Q9UPQ4 493 aa38.54■■■■□ 3.76
CHCHD4-202ENST00000396914 TFCP2L1Q9NZI6 479 aa38.52■■■■□ 3.76
CHCHD4-202ENST00000396914 LINC00116Q8NCU8 138 aa38.51■■■■□ 3.76
CHCHD4-202ENST00000396914 TAF1LQ8IZX4 1826 aa38.5■■■■□ 3.75
CHCHD4-202ENST00000396914 KCNQ3O43525 872 aa38.49■■■■□ 3.75
CHCHD4-202ENST00000396914 AK7Q96M32 723 aa38.49■■■■□ 3.75
CHCHD4-202ENST00000396914 KCPQ6ZWJ8 1503 aa38.49■■■■□ 3.75
CHCHD4-202ENST00000396914 AKT1S1Q96B36 256 aa38.48■■■■□ 3.75
CHCHD4-202ENST00000396914 ZNF496Q96IT1 587 aaPredicted RBP38.47■■■■□ 3.75
CHCHD4-202ENST00000396914 FMNL2Q96PY5 1086 aa38.47■■■■□ 3.75
CHCHD4-202ENST00000396914 LAS1LQ9Y4W2 734 aaKnown RBP38.47■■■■□ 3.75
CHCHD4-202ENST00000396914 SALL2Q9Y467 1007 aaPredicted RBP38.46■■■■□ 3.75
CHCHD4-202ENST00000396914 C4BP0C0L5 1744 aa38.46■■■■□ 3.75
CHCHD4-202ENST00000396914 UBR2Q8IWV8 1755 aa38.45■■■■□ 3.75
CHCHD4-202ENST00000396914 TSPYL4Q9UJ04 414 aa38.45■■■■□ 3.75
CHCHD4-202ENST00000396914 ZNF831Q5JPB2 1677 aa38.45■■■■□ 3.75
CHCHD4-202ENST00000396914 DNAJC10Q8IXB1 793 aa38.44■■■■□ 3.74
CHCHD4-202ENST00000396914 VSIG10Q8N0Z9 540 aa38.42■■■■□ 3.74
CHCHD4-202ENST00000396914 HEG1Q9ULI3 1381 aa38.41■■■■□ 3.74
CHCHD4-202ENST00000396914 TJP1Q07157 1748 aa38.4■■■■□ 3.74
CHCHD4-202ENST00000396914 GNPATO15228 680 aa38.39■■■■□ 3.74
CHCHD4-202ENST00000396914 MSH5O43196 834 aa38.39■■■■□ 3.74
CHCHD4-202ENST00000396914 CALD1Q05682 793 aaKnown RBP38.39■■■■□ 3.74
CHCHD4-202ENST00000396914 PHF14O94880 888 aa38.38■■■■□ 3.73
CHCHD4-202ENST00000396914 COL5A3P25940 1745 aaPredicted RBP38.37■■■■□ 3.73
CHCHD4-202ENST00000396914 CRKLP46109 303 aaKnown RBP38.37■■■■□ 3.73
CHCHD4-202ENST00000396914 KDM3BQ7LBC6 1761 aa38.36■■■■□ 3.73
CHCHD4-202ENST00000396914 PDGFDQ9GZP0 370 aaPredicted RBP38.36■■■■□ 3.73
CHCHD4-202ENST00000396914 STARD3NLO95772 234 aa38.35■■■■□ 3.73
CHCHD4-202ENST00000396914 TEX13AQ9BXU3 409 aaPredicted RBP38.35■■■■□ 3.73
CHCHD4-202ENST00000396914 CNTNAP4Q9C0A0 1308 aa38.35■■■■□ 3.73
CHCHD4-202ENST00000396914 TUBGCP6Q96RT7 1819 aa38.34■■■■□ 3.73
CHCHD4-202ENST00000396914 RC3H1Q5TC82 1133 aaKnown RBP38.34■■■■□ 3.73
CHCHD4-202ENST00000396914 BABAM1Q9NWV8 329 aa38.34■■■■□ 3.73
CHCHD4-202ENST00000396914 PNPLA7Q6ZV29 1317 aa38.34■■■■□ 3.73
CHCHD4-202ENST00000396914 SNRPA1P09661 255 aaKnown RBP38.33■■■■□ 3.73
CHCHD4-202ENST00000396914 CYP19A1P11511 503 aaPredicted RBP38.33■■■■□ 3.73
CHCHD4-202ENST00000396914 CCDC27Q2M243 656 aa38.33■■■■□ 3.73
CHCHD4-202ENST00000396914 SMIM5Q71RC9 77 aa38.33■■■■□ 3.73
CHCHD4-202ENST00000396914 WWC1Q8IX03 1113 aa38.33■■■■□ 3.73
CHCHD4-202ENST00000396914 CICQ96RK0 1608 aaPredicted RBP38.32■■■■□ 3.73
CHCHD4-202ENST00000396914 RTCBQ9Y3I0 505 aaKnown RBP38.32■■■■□ 3.73
CHCHD4-202ENST00000396914 EIF4A1P60842 406 aaKnown RBP38.31■■■■□ 3.72
CHCHD4-202ENST00000396914 CCDC87Q9NVE4 849 aa38.31■■■■□ 3.72
CHCHD4-202ENST00000396914 FLAD1Q8NFF5 587 aa38.3■■■■□ 3.72
CHCHD4-202ENST00000396914 CFAP44Q96MT7 982 aa38.3■■■■□ 3.72
CHCHD4-202ENST00000396914 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.29■■■■□ 3.72
CHCHD4-202ENST00000396914 CHL1O00533 1208 aa38.29■■■■□ 3.72
CHCHD4-202ENST00000396914 PRAMEF22A3QJZ6 481 aa38.29■■■■□ 3.72
CHCHD4-202ENST00000396914 COL23A1Q86Y22 540 aaPredicted RBP38.29■■■■□ 3.72
CHCHD4-202ENST00000396914 QSER1Q2KHR3 1735 aa38.28■■■■□ 3.72
CHCHD4-202ENST00000396914 GNAI1P63096 354 aa38.28■■■■□ 3.72
CHCHD4-202ENST00000396914 NCBP3Q53F19 620 aaKnown RBP38.28■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms