RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 SLC39A6Q13433 755 aa22.62■■□□□ 1.21
HLA-A-204ENST00000396634 UPF1Q92900 1129 aaKnown RBP eCLIP22.62■■□□□ 1.21
HLA-A-204ENST00000396634 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
HLA-A-204ENST00000396634 TEFQ10587 303 aa22.62■■□□□ 1.21
HLA-A-204ENST00000396634 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
HLA-A-204ENST00000396634 APBA3O96018 575 aa22.61■■□□□ 1.21
HLA-A-204ENST00000396634 DEFB132Q7Z7B7 95 aa22.61■■□□□ 1.21
HLA-A-204ENST00000396634 KCNQ4P56696 695 aa22.6■■□□□ 1.21
HLA-A-204ENST00000396634 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
HLA-A-204ENST00000396634 PAPPAQ13219 1627 aa22.58■■□□□ 1.21
HLA-A-204ENST00000396634 KCNQ3O43525 872 aa22.58■■□□□ 1.21
HLA-A-204ENST00000396634 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.21
HLA-A-204ENST00000396634 WWC1Q8IX03 1113 aa22.58■■□□□ 1.21
HLA-A-204ENST00000396634 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
HLA-A-204ENST00000396634 EN1Q05925 392 aaPredicted RBP22.58■■□□□ 1.2
HLA-A-204ENST00000396634 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
HLA-A-204ENST00000396634 ATG3Q9NT62 314 aa22.57■■□□□ 1.2
HLA-A-204ENST00000396634 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
HLA-A-204ENST00000396634 BTBD11A6QL63 1104 aa22.55■■□□□ 1.2
HLA-A-204ENST00000396634 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
HLA-A-204ENST00000396634 SF3B2Q13435 895 aaKnown RBP22.55■■□□□ 1.2
HLA-A-204ENST00000396634 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
HLA-A-204ENST00000396634 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
HLA-A-204ENST00000396634 LY75O60449 1722 aa22.55■■□□□ 1.2
HLA-A-204ENST00000396634 UBR2Q8IWV8 1755 aa22.53■■□□□ 1.2
HLA-A-204ENST00000396634 TAF7Q15545 349 aaPredicted RBP22.53■■□□□ 1.2
HLA-A-204ENST00000396634 EZH2Q15910 746 aaKnown RBP22.53■■□□□ 1.2
HLA-A-204ENST00000396634 SPINK5Q9NQ38 1064 aaPredicted RBP22.52■■□□□ 1.2
HLA-A-204ENST00000396634 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
HLA-A-204ENST00000396634 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
HLA-A-204ENST00000396634 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
HLA-A-204ENST00000396634 SLC4A9Q96Q91 983 aa22.51■■□□□ 1.19
HLA-A-204ENST00000396634 ZNF790Q6PG37 636 aa22.5■■□□□ 1.19
HLA-A-204ENST00000396634 PROM2Q8N271 834 aa22.5■■□□□ 1.19
HLA-A-204ENST00000396634 TSR2Q969E8 191 aaKnown RBP22.5■■□□□ 1.19
HLA-A-204ENST00000396634 BAG6P46379 1132 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 ZNF521Q96K83 1311 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 KRT24Q2M2I5 525 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 ZNF496Q96IT1 587 aaPredicted RBP22.49■■□□□ 1.19
HLA-A-204ENST00000396634 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 LRRC4BQ9NT99 713 aa22.49■■□□□ 1.19
HLA-A-204ENST00000396634 TTC5Q8N0Z6 440 aa22.48■■□□□ 1.19
HLA-A-204ENST00000396634 CAMKK2Q96RR4 588 aa22.48■■□□□ 1.19
HLA-A-204ENST00000396634 C5P01031 1676 aa22.48■■□□□ 1.19
HLA-A-204ENST00000396634 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 TXNRD1Q16881 649 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 CDCA7LQ96GN5 454 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 RGPD3A6NKT7 1758 aaPredicted RBP22.47■■□□□ 1.19
HLA-A-204ENST00000396634 RGPD4Q7Z3J3 1758 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 TJP1Q07157 1748 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 RREB1Q92766 1687 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 TAF1LQ8IZX4 1826 aa22.47■■□□□ 1.19
HLA-A-204ENST00000396634 NUP188Q5SRE5 1749 aa22.46■■□□□ 1.19
HLA-A-204ENST00000396634 LOC102724428A0A0B4J2F2 783 aa22.46■■□□□ 1.19
HLA-A-204ENST00000396634 SIK1P57059 783 aa22.46■■□□□ 1.19
HLA-A-204ENST00000396634 CCDC125Q86Z20 511 aa22.46■■□□□ 1.19
HLA-A-204ENST00000396634 CCNL1Q9UK58 526 aaPredicted RBP22.46■■□□□ 1.19
HLA-A-204ENST00000396634 CHL1O00533 1208 aa22.45■■□□□ 1.19
HLA-A-204ENST00000396634 PLSCR1O15162 318 aa22.45■■□□□ 1.19
HLA-A-204ENST00000396634 CFAP44Q96MT7 982 aa22.45■■□□□ 1.19
HLA-A-204ENST00000396634 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
HLA-A-204ENST00000396634 ITPK1Q13572 414 aa22.45■■□□□ 1.18
HLA-A-204ENST00000396634 SMARCC1Q92922 1105 aaPredicted RBP22.45■■□□□ 1.18
HLA-A-204ENST00000396634 SOCS7O14512 581 aa22.43■■□□□ 1.18
HLA-A-204ENST00000396634 ATP6V1AP38606 617 aa22.43■■□□□ 1.18
HLA-A-204ENST00000396634 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
HLA-A-204ENST00000396634 EIF4A1P60842 406 aaKnown RBP22.42■■□□□ 1.18
HLA-A-204ENST00000396634 GNAI1P63096 354 aa22.42■■□□□ 1.18
HLA-A-204ENST00000396634 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
HLA-A-204ENST00000396634 COL5A3P25940 1745 aaPredicted RBP22.42■■□□□ 1.18
HLA-A-204ENST00000396634 CALD1Q05682 793 aaKnown RBP22.41■■□□□ 1.18
HLA-A-204ENST00000396634 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
HLA-A-204ENST00000396634 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
HLA-A-204ENST00000396634 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
HLA-A-204ENST00000396634 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
HLA-A-204ENST00000396634 SMIM5Q71RC9 77 aa22.41■■□□□ 1.18
HLA-A-204ENST00000396634 LINC00116Q8NCU8 138 aa22.41■■□□□ 1.18
HLA-A-204ENST00000396634 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
HLA-A-204ENST00000396634 MYH14Q7Z406 1995 aaKnown RBP22.41■■□□□ 1.18
HLA-A-204ENST00000396634 HEG1Q9ULI3 1381 aa22.4■■□□□ 1.18
HLA-A-204ENST00000396634 GOLGA2Q08379 1002 aa22.39■■□□□ 1.18
HLA-A-204ENST00000396634 NGEFQ8N5V2 710 aa22.39■■□□□ 1.18
HLA-A-204ENST00000396634 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.18
HLA-A-204ENST00000396634 PIP4K2AP48426 406 aaPredicted RBP22.39■■□□□ 1.17
HLA-A-204ENST00000396634 C4BP0C0L5 1744 aa22.38■■□□□ 1.17
HLA-A-204ENST00000396634 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
HLA-A-204ENST00000396634 IL16Q14005 1332 aa22.38■■□□□ 1.17
HLA-A-204ENST00000396634 TSPYL6Q8N831 410 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 ZBED9Q6R2W3 1325 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 ZNF831Q5JPB2 1677 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 TUBGCP6Q96RT7 1819 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 ZNF827Q17R98 1081 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
HLA-A-204ENST00000396634 AMIGO3Q86WK7 504 aa22.36■■□□□ 1.17
HLA-A-204ENST00000396634 GIGYF1O75420 1035 aaPredicted RBP22.35■■□□□ 1.17
HLA-A-204ENST00000396634 SLFN5Q08AF3 891 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms