RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 HSCBQ8IWL3 235 aa20.58■□□□□ 0.88
TRIM39-205ENST00000396551 SNX21Q969T3 373 aa20.58■□□□□ 0.88
TRIM39-205ENST00000396551 LRRC59Q96AG4 307 aaKnown RBP20.58■□□□□ 0.88
TRIM39-205ENST00000396551 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
TRIM39-205ENST00000396551 LGR6Q9HBX8 967 aa20.57■□□□□ 0.88
TRIM39-205ENST00000396551 GNAI2P04899 355 aa20.55■□□□□ 0.88
TRIM39-205ENST00000396551 HMMRO75330 724 aa20.55■□□□□ 0.88
TRIM39-205ENST00000396551 GCP02774 474 aa20.55■□□□□ 0.88
TRIM39-205ENST00000396551 ARHGEF25Q86VW2 580 aa20.54■□□□□ 0.88
TRIM39-205ENST00000396551 PXDNLA1KZ92 1463 aa20.54■□□□□ 0.88
TRIM39-205ENST00000396551 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
TRIM39-205ENST00000396551 HDGFL1Q5TGJ6 251 aa20.53■□□□□ 0.88
TRIM39-205ENST00000396551 PHAXQ9H814 394 aaKnown RBP20.53■□□□□ 0.88
TRIM39-205ENST00000396551 CHMP5Q9NZZ3 219 aa20.53■□□□□ 0.88
TRIM39-205ENST00000396551 CD2BP2O95400 341 aaKnown RBP20.52■□□□□ 0.88
TRIM39-205ENST00000396551 SDSP20132 328 aa20.52■□□□□ 0.88
TRIM39-205ENST00000396551 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
TRIM39-205ENST00000396551 PXDNQ92626 1479 aa20.52■□□□□ 0.88
TRIM39-205ENST00000396551 CAMTA1Q9Y6Y1 1673 aa20.52■□□□□ 0.88
TRIM39-205ENST00000396551 DDIT3P35638 169 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
TRIM39-205ENST00000396551 GNAI3P08754 354 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 TUBGCP6Q96RT7 1819 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 PNMA6EA0A0J9YXQ4 647 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 KCNQ3O43525 872 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
TRIM39-205ENST00000396551 EXOC6BQ9Y2D4 811 aa20.5■□□□□ 0.87
TRIM39-205ENST00000396551 ZNF530Q6P9A1 599 aaPredicted RBP20.5■□□□□ 0.87
TRIM39-205ENST00000396551 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
TRIM39-205ENST00000396551 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
TRIM39-205ENST00000396551 ATP8B2P98198 1209 aa20.49■□□□□ 0.87
TRIM39-205ENST00000396551 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
TRIM39-205ENST00000396551 PROSER2Q86WR7 435 aaPredicted RBP20.49■□□□□ 0.87
TRIM39-205ENST00000396551 USP44Q9H0E7 712 aa20.49■□□□□ 0.87
TRIM39-205ENST00000396551 LMOD2Q6P5Q4 547 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 OSBPL3Q9H4L5 887 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 LRRFIP2Q9Y608 721 aaKnown RBP20.48■□□□□ 0.87
TRIM39-205ENST00000396551 PLEKHO1Q53GL0 409 aaPredicted RBP20.48■□□□□ 0.87
TRIM39-205ENST00000396551 MPRIPQ6WCQ1 1025 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 SALL3Q9BXA9 1300 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
TRIM39-205ENST00000396551 AXIN2Q9Y2T1 843 aa20.48■□□□□ 0.87
TRIM39-205ENST00000396551 PDE1AP54750 535 aa20.47■□□□□ 0.87
TRIM39-205ENST00000396551 ALS2Q96Q42 1657 aa20.47■□□□□ 0.87
TRIM39-205ENST00000396551 USP26Q9BXU7 913 aa20.47■□□□□ 0.87
TRIM39-205ENST00000396551 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
TRIM39-205ENST00000396551 HOXB7P09629 217 aa20.46■□□□□ 0.87
TRIM39-205ENST00000396551 MCM4P33991 863 aa20.46■□□□□ 0.87
TRIM39-205ENST00000396551 CHPF2Q9P2E5 772 aa20.46■□□□□ 0.87
TRIM39-205ENST00000396551 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-205ENST00000396551 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.86
TRIM39-205ENST00000396551 TEFQ10587 303 aa20.45■□□□□ 0.86
TRIM39-205ENST00000396551 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
TRIM39-205ENST00000396551 SIPA1L3O60292 1781 aaPredicted RBP20.45■□□□□ 0.86
TRIM39-205ENST00000396551 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
TRIM39-205ENST00000396551 LRRCC1Q9C099 1032 aa20.44■□□□□ 0.86
TRIM39-205ENST00000396551 K7ELQ4 463 aaPredicted RBP20.44■□□□□ 0.86
TRIM39-205ENST00000396551 UBTFL1P0CB47 393 aaPredicted RBP20.43■□□□□ 0.86
TRIM39-205ENST00000396551 MST1RQ04912 1400 aa20.43■□□□□ 0.86
TRIM39-205ENST00000396551 TSHZ3Q63HK5 1081 aa20.43■□□□□ 0.86
TRIM39-205ENST00000396551 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
TRIM39-205ENST00000396551 C19orf44Q9H6X5 657 aa20.42■□□□□ 0.86
TRIM39-205ENST00000396551 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
TRIM39-205ENST00000396551 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
TRIM39-205ENST00000396551 ANXA1P04083 346 aa20.42■□□□□ 0.86
TRIM39-205ENST00000396551 SRCIN1Q9C0H9 1055 aa20.42■□□□□ 0.86
TRIM39-205ENST00000396551 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
TRIM39-205ENST00000396551 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
TRIM39-205ENST00000396551 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
TRIM39-205ENST00000396551 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
TRIM39-205ENST00000396551 ADCY9O60503 1353 aa20.39■□□□□ 0.86
TRIM39-205ENST00000396551 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 RABEP1Q15276 862 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 FOXD4L1Q9NU39 408 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 MX1P20591 662 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
TRIM39-205ENST00000396551 CIZ1Q9ULV3 898 aaPredicted RBP20.39■□□□□ 0.85
TRIM39-205ENST00000396551 ERBB3P21860 1342 aa20.38■□□□□ 0.85
TRIM39-205ENST00000396551 ZC3H6P61129 1189 aaKnown RBP20.38■□□□□ 0.85
TRIM39-205ENST00000396551 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
TRIM39-205ENST00000396551 POLA2Q14181 598 aa20.38■□□□□ 0.85
TRIM39-205ENST00000396551 CRYBG1Q9Y4K1 1723 aa20.37■□□□□ 0.85
TRIM39-205ENST00000396551 PPP1R42Q7Z4L9 355 aa20.37■□□□□ 0.85
TRIM39-205ENST00000396551 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
TRIM39-205ENST00000396551 ERC2O15083 957 aa20.37■□□□□ 0.85
TRIM39-205ENST00000396551 STAP2Q9UGK3 403 aa20.37■□□□□ 0.85
TRIM39-205ENST00000396551 LMTK3Q96Q04 1460 aa20.37■□□□□ 0.85
TRIM39-205ENST00000396551 TNPO1Q92973 898 aaKnown RBP20.36■□□□□ 0.85
TRIM39-205ENST00000396551 PRAMEF22A3QJZ6 481 aa20.36■□□□□ 0.85
TRIM39-205ENST00000396551 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
TRIM39-205ENST00000396551 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
TRIM39-205ENST00000396551 COL18A1P39060 1754 aa20.36■□□□□ 0.85
TRIM39-205ENST00000396551 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
TRIM39-205ENST00000396551 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
TRIM39-205ENST00000396551 REC8O95072 547 aa20.35■□□□□ 0.85
TRIM39-205ENST00000396551 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms