RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ADGRB2O60241 1585 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 APBB1O00213 710 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 NPHP3Q7Z494 1330 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 ATP2B3Q16720 1220 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 PLEKHG1Q9ULL1 1385 aa10.17□□□□□ -0.78
NDE1-202ENST00000396355 RLBP1P12271 317 aa10.16□□□□□ -0.78
NDE1-202ENST00000396355 ZKSCAN5Q9Y2L8 839 aa10.16□□□□□ -0.78
NDE1-202ENST00000396355 NGDNQ8NEJ9 315 aaKnown RBP10.16□□□□□ -0.78
NDE1-202ENST00000396355 EVA1CP58658 441 aa10.16□□□□□ -0.78
NDE1-202ENST00000396355 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
NDE1-202ENST00000396355 BCCIPQ9P287 314 aaKnown RBP eCLIP10.16□□□□□ -0.78
NDE1-202ENST00000396355 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
NDE1-202ENST00000396355 SYAP1Q96A49 352 aaPredicted RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 CWC15Q9P013 229 aaKnown RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 TAOK2Q9UL54 1235 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 CCDC112Q8NEF3 446 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 ANKRD36BQ8N2N9 1353 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 USP19O94966 1318 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 RARSP54136 660 aaKnown RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 TPD52L1Q16890 204 aaPredicted RBP10.15□□□□□ -0.78
NDE1-202ENST00000396355 ATAD2Q6PL18 1390 aa10.15□□□□□ -0.78
NDE1-202ENST00000396355 BAG6P46379 1132 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 PMFBP1Q8TBY8 1022 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 RUNDC1Q96C34 613 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 SRRTQ9BXP5 876 aaKnown RBP10.14□□□□□ -0.79
NDE1-202ENST00000396355 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 WAPLQ7Z5K2 1190 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 CABLES1Q8TDN4 633 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 C16orf45Q96MC5 204 aaPredicted RBP10.14□□□□□ -0.79
NDE1-202ENST00000396355 RASSF4Q9H2L5 321 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 MAPK8IP3Q9UPT6 1336 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 TMEM131LA2VDJ0 1609 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 CGNL1Q0VF96 1302 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 RPGRIP1LQ68CZ1 1315 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 CD163L1Q9NR16 1453 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
NDE1-202ENST00000396355 COL3A1P02461 1466 aaPredicted RBP10.13□□□□□ -0.79
NDE1-202ENST00000396355 ARHGAP31Q2M1Z3 1444 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 SSFA2P28290 1259 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 E2F4Q16254 413 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 DEFB132Q7Z7B7 95 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 KRT28Q7Z3Y7 464 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
NDE1-202ENST00000396355 GOLGA6L4A6NEF3 574 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 USP25Q9UHP3 1055 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 PCDHB15Q9Y5E8 787 aa10.13□□□□□ -0.79
NDE1-202ENST00000396355 ANKRD26Q9UPS8 1709 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 NOLC1Q14978 699 aaKnown RBP eCLIP10.12□□□□□ -0.79
NDE1-202ENST00000396355 ZNF622Q969S3 477 aaKnown RBP eCLIP10.12□□□□□ -0.791e-8■□□□□ 8.5
NDE1-202ENST00000396355 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
NDE1-202ENST00000396355 H0YHG0 523 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 PIK3R5Q8WYR1 880 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 BCL2L12Q9HB09 334 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 MNAT1P51948 309 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 AXDND1Q5T1B0 1012 aaPredicted RBP10.12□□□□□ -0.79
NDE1-202ENST00000396355 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 EVC2Q86UK5 1308 aa10.12□□□□□ -0.79
NDE1-202ENST00000396355 ABCC11Q96J66 1382 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
NDE1-202ENST00000396355 TMED8Q6PL24 325 aaPredicted RBP10.11□□□□□ -0.79
NDE1-202ENST00000396355 KRT222Q8N1A0 295 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 MYCBPQ99417 103 aaPredicted RBP10.11□□□□□ -0.79
NDE1-202ENST00000396355 ZNF142P52746 1687 aaPredicted RBP10.11□□□□□ -0.79
NDE1-202ENST00000396355 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 PLCD4Q9BRC7 762 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 PRDM11Q9NQV5 511 aa10.11□□□□□ -0.79
NDE1-202ENST00000396355 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
NDE1-202ENST00000396355 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
NDE1-202ENST00000396355 FSD2A1L4K1 749 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 SART3Q15020 963 aaKnown RBP10.1□□□□□ -0.79
NDE1-202ENST00000396355 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 NOL7Q9UMY1 257 aaKnown RBP10.1□□□□□ -0.79
NDE1-202ENST00000396355 WDR63Q8IWG1 891 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 SEPT12Q8IYM1 358 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 TSR2Q969E8 191 aaKnown RBP10.1□□□□□ -0.79
NDE1-202ENST00000396355 PRIMPOLQ96LW4 560 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
NDE1-202ENST00000396355 NSD2O96028 1365 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
NDE1-202ENST00000396355 MYRIPQ8NFW9 859 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 PLEKHF1Q96S99 279 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 OGFRQ9NZT2 677 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
NDE1-202ENST00000396355 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
NDE1-202ENST00000396355 NUTM2GQ5VZR2 741 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 HOMER1Q86YM7 354 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 GIMAP7Q8NHV1 300 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 TSPY26PQ9H489 355 aa10.09□□□□□ -0.79
NDE1-202ENST00000396355 MPHOSPH10O00566 681 aaKnown RBP10.09□□□□□ -0.79
NDE1-202ENST00000396355 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
NDE1-202ENST00000396355 RDXP35241 583 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms