RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.68
HOXA3-202ENST00000396352 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
HOXA3-202ENST00000396352 LTKP29376 864 aa19.27■□□□□ 0.67
HOXA3-202ENST00000396352 IGSF1Q8N6C5 1336 aa19.27■□□□□ 0.67
HOXA3-202ENST00000396352 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.67
HOXA3-202ENST00000396352 EXOC6BQ9Y2D4 811 aa19.26■□□□□ 0.67
HOXA3-202ENST00000396352 GNAI2P04899 355 aa19.26■□□□□ 0.67
HOXA3-202ENST00000396352 KIF13AQ9H1H9 1805 aa19.26■□□□□ 0.67
HOXA3-202ENST00000396352 ZSCAN23Q3MJ62 389 aa19.26■□□□□ 0.67
HOXA3-202ENST00000396352 CACNA1FO60840 1977 aa19.25■□□□□ 0.67
HOXA3-202ENST00000396352 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
HOXA3-202ENST00000396352 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
HOXA3-202ENST00000396352 EYA1Q99502 592 aa19.25■□□□□ 0.67
HOXA3-202ENST00000396352 MARF1Q9Y4F3 1742 aaKnown RBP19.24■□□□□ 0.67
HOXA3-202ENST00000396352 GPT2Q8TD30 523 aa19.23■□□□□ 0.67
HOXA3-202ENST00000396352 ESYT1Q9BSJ8 1104 aa19.23■□□□□ 0.67
HOXA3-202ENST00000396352 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 FLIIQ13045 1269 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 DIP2AQ14689 1571 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 NWD1Q149M9 1564 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
HOXA3-202ENST00000396352 MX1P20591 662 aa19.21■□□□□ 0.67
HOXA3-202ENST00000396352 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
HOXA3-202ENST00000396352 NCLP19338 710 aaKnown RBP19.21■□□□□ 0.67
HOXA3-202ENST00000396352 NEK4P51957 841 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 TMX3Q96JJ7 454 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
HOXA3-202ENST00000396352 ATP8B2P98198 1209 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 CHAMP1Q96JM3 812 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 GNAI3P08754 354 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 SLC26A8Q96RN1 970 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
HOXA3-202ENST00000396352 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
HOXA3-202ENST00000396352 CCDC30Q5VVM6 783 aa19.19■□□□□ 0.66
HOXA3-202ENST00000396352 CHMLP26374 656 aa19.19■□□□□ 0.66
HOXA3-202ENST00000396352 AMPHP49418 695 aa19.19■□□□□ 0.66
HOXA3-202ENST00000396352 RBSNQ9H1K0 784 aa19.19■□□□□ 0.66
HOXA3-202ENST00000396352 STAP2Q9UGK3 403 aa19.19■□□□□ 0.66
HOXA3-202ENST00000396352 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
HOXA3-202ENST00000396352 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
HOXA3-202ENST00000396352 CUL4AQ13619 759 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 IL17RAQ96F46 866 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 GNAT3A8MTJ3 354 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
HOXA3-202ENST00000396352 ANP32BQ92688 251 aaKnown RBP19.17■□□□□ 0.66
HOXA3-202ENST00000396352 MCM2P49736 904 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 UBE2Q2Q8WVN8 375 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 AMOTL2Q9Y2J4 779 aa19.17■□□□□ 0.66
HOXA3-202ENST00000396352 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
HOXA3-202ENST00000396352 ANAPC15P60006 121 aa19.16■□□□□ 0.66
HOXA3-202ENST00000396352 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
HOXA3-202ENST00000396352 UNC5CLQ8IV45 518 aa19.16■□□□□ 0.66
HOXA3-202ENST00000396352 NSFL1CQ9UNZ2 370 aaKnown RBP19.16■□□□□ 0.66
HOXA3-202ENST00000396352 TMEM63CQ9P1W3 806 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 BRD1O95696 1058 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
HOXA3-202ENST00000396352 SLIT1O75093 1534 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 MAP3K5Q99683 1374 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
HOXA3-202ENST00000396352 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
HOXA3-202ENST00000396352 RILPL2Q969X0 211 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 PDLIM2Q96JY6 352 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 ANO2Q9NQ90 1003 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 TRIM6-TRIM34B2RNG4 842 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 MCCP23508 829 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 SRCIN1Q9C0H9 1055 aa19.14■□□□□ 0.65
HOXA3-202ENST00000396352 ARHGAP23Q9P227 1491 aa19.13■□□□□ 0.65
HOXA3-202ENST00000396352 HOXC9P31274 260 aa19.13■□□□□ 0.65
HOXA3-202ENST00000396352 AOX1Q06278 1338 aa19.13■□□□□ 0.65
HOXA3-202ENST00000396352 FOXD4L5Q5VV16 416 aaPredicted RBP19.13■□□□□ 0.65
HOXA3-202ENST00000396352 FOXD4L4Q8WXT5 416 aaPredicted RBP19.13■□□□□ 0.65
HOXA3-202ENST00000396352 IL25Q9H293 177 aa19.13■□□□□ 0.65
HOXA3-202ENST00000396352 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
HOXA3-202ENST00000396352 LRSAM1Q6UWE0 723 aa19.12■□□□□ 0.65
HOXA3-202ENST00000396352 SSH3Q8TE77 659 aa19.11■□□□□ 0.65
HOXA3-202ENST00000396352 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
HOXA3-202ENST00000396352 HS1BP3Q53T59 392 aa19.11■□□□□ 0.65
HOXA3-202ENST00000396352 NLRP6P59044 892 aa19.1■□□□□ 0.65
HOXA3-202ENST00000396352 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
HOXA3-202ENST00000396352 SYCE3A1L190 88 aa19.1■□□□□ 0.65
HOXA3-202ENST00000396352 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
HOXA3-202ENST00000396352 UBTFL1P0CB47 393 aaPredicted RBP19.1■□□□□ 0.65
HOXA3-202ENST00000396352 EID1Q9Y6B2 187 aa19.1■□□□□ 0.65
HOXA3-202ENST00000396352 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
HOXA3-202ENST00000396352 MBD3O95983 291 aa19.09■□□□□ 0.65
HOXA3-202ENST00000396352 NOL8Q76FK4 1167 aaKnown RBP19.09■□□□□ 0.65
HOXA3-202ENST00000396352 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
HOXA3-202ENST00000396352 PHAXQ9H814 394 aaKnown RBP19.09■□□□□ 0.65
HOXA3-202ENST00000396352 MED1Q15648 1581 aaPredicted RBP19.09■□□□□ 0.65
HOXA3-202ENST00000396352 LTN1O94822 1766 aa19.09■□□□□ 0.65
HOXA3-202ENST00000396352 ANKARQ7Z5J8 1434 aa19.09■□□□□ 0.65
HOXA3-202ENST00000396352 UPF3BQ9BZI7 483 aaKnown RBP19.08■□□□□ 0.65
HOXA3-202ENST00000396352 CEBPAP49715 358 aaPredicted RBP19.08■□□□□ 0.64
HOXA3-202ENST00000396352 POLA2Q14181 598 aa19.08■□□□□ 0.64
HOXA3-202ENST00000396352 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.08■□□□□ 0.64
HOXA3-202ENST00000396352 EPB41L2O43491 1005 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms