RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TAF7Q15545 349 aaPredicted RBP6.39□□□□□ -1.39
VPS13C-204ENST00000395898 ABCA10Q8WWZ4 1543 aa6.39□□□□□ -1.39
VPS13C-204ENST00000395898 BIVM-ERCC5R4GMW8 1640 aa6.39□□□□□ -1.39
VPS13C-204ENST00000395898 ZPR1O75312 459 aa6.39□□□□□ -1.39
VPS13C-204ENST00000395898 POTEJP0CG39 1038 aa6.39□□□□□ -1.39
VPS13C-204ENST00000395898 CCDC112Q8NEF3 446 aa6.39□□□□□ -1.39
VPS13C-204ENST00000395898 FGFR1OPO95684 399 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 IQCA1Q86XH1 822 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 FBXO3Q9UK99 471 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MAP4K4O95819 1239 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 NSD2O96028 1365 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 METTL24Q5JXM2 366 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 SLF2Q8IX21 1173 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 SLC26A8Q96RN1 970 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 TMOD3Q9NYL9 352 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 NAIPQ13075 1403 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 IDH1O75874 414 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 TMOD2Q9NZR1 351 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 ABCF2Q9UG63 623 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 KIF2AO00139 706 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MPHOSPH10O00566 681 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 EPB41L2O43491 1005 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MCM3P25205 808 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 HYPKQ9NX55 129 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 KIAA0754O94854 1291 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 IFIT1P09914 478 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 CETN2P41208 172 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 JAKMIP3Q5VZ66 844 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 RAI14Q9P0K7 980 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 CD109Q6YHK3 1445 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 PHAXQ9H814 394 aaKnown RBP6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MKNK2Q9HBH9 465 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 MAP3K12Q12852 859 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 TMEM57Q8N5G2 664 aa6.38□□□□□ -1.39
VPS13C-204ENST00000395898 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 CTAGE5O15320 804 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 NBPF8Q3BBV2 869 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 STK11IPQ8N1F8 1099 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 NAPBQ9H115 298 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 KIAA1328Q86T90 577 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 ENOX2Q16206 610 aaKnown RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 DUSP27Q5VZP5 1158 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 CCDC148Q8NFR7 591 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 ZNF213O14771 459 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 IFIT5Q13325 482 aaKnown RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 DHX29Q7Z478 1369 aaKnown RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 RNF41Q9H4P4 317 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 NUTM2BA6NNL0 878 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 NUTM2EB1AL46 878 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 NUTM2AQ8IVF1 878 aaPredicted RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 TTC21BQ7Z4L5 1316 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 KIF20AO95235 890 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 MX1P20591 662 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 MATR3P43243 847 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 EIF5P55010 431 aaKnown RBP6.37□□□□□ -1.39
VPS13C-204ENST00000395898 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
VPS13C-204ENST00000395898 EIF2AK4Q9P2K8 1649 aaKnown RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 WDHD1O75717 1129 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 EZRP15311 586 aaKnown RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 GBP3Q9H0R5 595 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 USP5P45974 858 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 VPS36Q86VN1 386 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 PDCL2Q8N4E4 241 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 ANO10Q9NW15 660 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 ZSCAN12O43309 604 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 CFAP100Q494V2 611 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 PYM1Q9BRP8 204 aaKnown RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 TEX13AQ9BXU3 409 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 TSPYL1Q9H0U9 437 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 TTF1Q15361 905 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 PPP4R3AQ6IN85 833 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 IL1RAPL2Q9NP60 686 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 ANKIB1Q9P2G1 1089 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 LRRFIP2Q9Y608 721 aaKnown RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 MCM4P33991 863 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 MAP9Q49MG5 647 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 ZNF444Q8N0Y2 327 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 FAM177A1Q8N128 213 aaPredicted RBP6.36□□□□□ -1.39
VPS13C-204ENST00000395898 TSG101Q99816 390 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 EXOC6BQ9Y2D4 811 aa6.36□□□□□ -1.39
VPS13C-204ENST00000395898 FKBP15Q5T1M5 1219 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 DZIP1Q86YF9 867 aaKnown RBP6.35□□□□□ -1.39
VPS13C-204ENST00000395898 ANKRD62A6NC57 917 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 CCDC150Q8NCX0 1101 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 CTCFLQ8NI51 663 aaPredicted RBP6.35□□□□□ -1.39
VPS13C-204ENST00000395898 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
VPS13C-204ENST00000395898 CCDC183Q5T5S1 534 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 BCL11BQ9C0K0 894 aaPredicted RBP6.35□□□□□ -1.39
VPS13C-204ENST00000395898 C8orf76Q96K31 380 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 USP8P40818 1118 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 SPA17Q15506 151 aa6.35□□□□□ -1.39
VPS13C-204ENST00000395898 TMEM266Q2M3C6 531 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms