RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FKBP4Q02790 459 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 IGSF5Q9NSI5 407 aa8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 FOXO3O43524 673 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 ADH1CP00326 375 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 FOXK2Q01167 660 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
HMGB1P10-201ENST00000395823 SAP130Q9H0E3 1048 aa8.36□□□□□ -1.07
HMGB1P10-201ENST00000395823 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 BACH1O14867 736 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 NPR3P17342 541 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 CCDC116Q8IYX3 515 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 ESF1Q9H501 851 aaKnown RBP8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 GNRH1P01148 92 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 MAPK1P28482 360 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 MYT1Q01538 1121 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 TBCELQ5QJ74 424 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 CYP2U1Q7Z449 544 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 ASB16Q96NS5 453 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 RAB6BQ9NRW1 208 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 WNT7AO00755 349 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 IL2RAP01589 272 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 NR5A1Q13285 461 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MTFR1Q15390 333 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 SLC9A9Q8IVB4 645 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 KDF1Q8NAX2 398 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 A6NJY4 79 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 HRH3Q9Y5N1 445 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 TNFRSF10BO14763 440 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 IGSF3O75054 1194 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 MPSTP25325 297 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 SMTNP53814 917 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 XAGE2Q96GT9 111 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 COX20Q5RI15 118 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 FAM13AO94988 1023 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 ADH1AP07327 375 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 SLC19A1P41440 591 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 PSMA6P60900 246 aaKnown RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 CBLBQ13191 982 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 SH3PXD2AQ5TCZ1 1133 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 TMC7Q7Z402 723 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZDHHC1Q8WTX9 485 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 FHDC1Q9C0D6 1143 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 EML1O00423 815 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 FZD6O60353 706 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 IGHA2P01877 340 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 P4HBP07237 508 aaKnown RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 EIF1AXP47813 144 aaKnown RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 CLN3Q13286 438 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 NNTQ13423 1086 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 COL19A1Q14993 1142 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 TLR1Q15399 786 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 SPRYD7Q5W111 196 aa8.25□□□□□ -1.09
HMGB1P10-201ENST00000395823 MYO19Q96H55 970 aa8.25□□□□□ -1.09
HMGB1P10-201ENST00000395823 CCDC87Q9NVE4 849 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms