RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
HLA-DRA-202ENST00000395388 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
HLA-DRA-202ENST00000395388 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
HLA-DRA-202ENST00000395388 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
HLA-DRA-202ENST00000395388 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
HLA-DRA-202ENST00000395388 DOT1LQ8TEK3 1739 aa16.37■□□□□ 0.21
HLA-DRA-202ENST00000395388 SBF2Q86WG5 1849 aa16.36■□□□□ 0.21
HLA-DRA-202ENST00000395388 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
HLA-DRA-202ENST00000395388 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
HLA-DRA-202ENST00000395388 ITGB4P16144 1822 aa16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 NHSQ6T4R5 1651 aa16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 BAG6P46379 1132 aa16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 GNAI1P63096 354 aa16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
HLA-DRA-202ENST00000395388 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
HLA-DRA-202ENST00000395388 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
HLA-DRA-202ENST00000395388 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
HLA-DRA-202ENST00000395388 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.21
HLA-DRA-202ENST00000395388 PLSCR1O15162 318 aa16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 UPF1Q92900 1129 aaKnown RBP eCLIP16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 IFT57Q9NWB7 429 aa16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
HLA-DRA-202ENST00000395388 MRC1P22897 1456 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 GOLGA2Q08379 1002 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 IL16Q14005 1332 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 ZNF790Q6PG37 636 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
HLA-DRA-202ENST00000395388 CHL1O00533 1208 aa16.3■□□□□ 0.2
HLA-DRA-202ENST00000395388 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
HLA-DRA-202ENST00000395388 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
HLA-DRA-202ENST00000395388 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
HLA-DRA-202ENST00000395388 BTAF1O14981 1849 aa16.3■□□□□ 0.2
HLA-DRA-202ENST00000395388 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
HLA-DRA-202ENST00000395388 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
HLA-DRA-202ENST00000395388 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
HLA-DRA-202ENST00000395388 EN1Q05925 392 aaPredicted RBP16.28■□□□□ 0.2
HLA-DRA-202ENST00000395388 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
HLA-DRA-202ENST00000395388 ZNF521Q96K83 1311 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 E9PSI1 815 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 KCNQ3O43525 872 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 SIK1P57059 783 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 TEX13AQ9BXU3 409 aaPredicted RBP16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 MBIPQ9NS73 344 aa16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
HLA-DRA-202ENST00000395388 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
HLA-DRA-202ENST00000395388 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
HLA-DRA-202ENST00000395388 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
HLA-DRA-202ENST00000395388 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
HLA-DRA-202ENST00000395388 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
HLA-DRA-202ENST00000395388 SNRPA1P09661 255 aaKnown RBP16.25■□□□□ 0.19
HLA-DRA-202ENST00000395388 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
HLA-DRA-202ENST00000395388 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
HLA-DRA-202ENST00000395388 CAMKK2Q96RR4 588 aa16.25■□□□□ 0.19
HLA-DRA-202ENST00000395388 SLFN5Q08AF3 891 aa16.24■□□□□ 0.19
HLA-DRA-202ENST00000395388 TSR2Q969E8 191 aaKnown RBP16.24■□□□□ 0.19
HLA-DRA-202ENST00000395388 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
HLA-DRA-202ENST00000395388 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
HLA-DRA-202ENST00000395388 STARD3NLO95772 234 aa16.22■□□□□ 0.19
HLA-DRA-202ENST00000395388 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
HLA-DRA-202ENST00000395388 SPINK5Q9NQ38 1064 aaPredicted RBP16.22■□□□□ 0.19
HLA-DRA-202ENST00000395388 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 PAPPAQ13219 1627 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 SOCS7O14512 581 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 PROM2Q8N271 834 aa16.21■□□□□ 0.19
HLA-DRA-202ENST00000395388 LY75O60449 1722 aa16.2■□□□□ 0.18
HLA-DRA-202ENST00000395388 KCNQ4P56696 695 aa16.2■□□□□ 0.18
HLA-DRA-202ENST00000395388 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
HLA-DRA-202ENST00000395388 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 ELL2O00472 640 aaPredicted RBP16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 HOXB7P09629 217 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 EXOSC9Q06265 439 aaKnown RBP16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 ITPK1Q13572 414 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 SLC4A9Q96Q91 983 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
HLA-DRA-202ENST00000395388 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 NPM2Q86SE8 214 aaKnown RBP16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 TRMT2AQ8IZ69 625 aaKnown RBP16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
HLA-DRA-202ENST00000395388 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms