RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 ZSCAN23Q3MJ62 389 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 NOL10Q9BSC4 688 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 ANTXR1Q9H6X2 564 aa13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
RAPGEF3-202ENST00000395358 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 PRDM11Q9NQV5 511 aa13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 PPLO60437 1756 aa13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 TTC12Q9H892 705 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 ADAMTS8Q9UP79 889 aa13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 SLIT1O75093 1534 aa13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
RAPGEF3-202ENST00000395358 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 ARHGAP23Q9P227 1491 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 HMOX1P09601 288 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 RBSNQ9H1K0 784 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 APAF1O14727 1248 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 RUNDC1Q96C34 613 aa13.62□□□□□ -0.23
RAPGEF3-202ENST00000395358 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 TPD52L1Q16890 204 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 KDM5AP29375 1690 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 POLR3GO15318 223 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 NGEFQ8N5V2 710 aa13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-202ENST00000395358 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 EDC4Q6P2E9 1401 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 MBD3O95983 291 aa13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 USP25Q9UHP3 1055 aa13.6□□□□□ -0.23
RAPGEF3-202ENST00000395358 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 BCAR3O75815 825 aa13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 IGHDP01880 384 aa13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-202ENST00000395358 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.23
RAPGEF3-202ENST00000395358 DLC1Q96QB1 1528 aa13.58□□□□□ -0.23
RAPGEF3-202ENST00000395358 NPC1L1Q9UHC9 1359 aa13.58□□□□□ -0.23
RAPGEF3-202ENST00000395358 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 KDM2BQ8NHM5 1336 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 NRDCO43847 1150 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 TPM4P67936 248 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 ADGRB1O14514 1584 aa13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 ARGLU1Q9NWB6 273 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-202ENST00000395358 TPM3P06753 285 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 UBR1Q8IWV7 1749 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 ADGRL3Q9HAR2 1447 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 C1orf141Q5JVX7 400 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 C16orf45Q96MC5 204 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 EFCC1Q9HA90 598 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-202ENST00000395358 GOLIM4O00461 696 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 ST18O60284 1047 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 AK7Q96M32 723 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 STRN4Q9NRL3 753 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 DIP2AQ14689 1571 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 TECPR2O15040 1411 aa13.56□□□□□ -0.24
RAPGEF3-202ENST00000395358 FBLN1P23142 703 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 MYO5BQ9ULV0 1848 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 PTPRUQ92729 1446 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 ITPRIPQ8IWB1 547 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 GNL2Q13823 731 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
RAPGEF3-202ENST00000395358 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 TCP11L2Q8N4U5 519 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 ATP7BP35670 1465 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 FCHSD2O94868 740 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 TTLL5Q6EMB2 1281 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 LRSAM1Q6UWE0 723 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
RAPGEF3-202ENST00000395358 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 GCP02774 474 aa13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 POLKQ9UBT6 870 aa13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 V9GYY5 206 aaPredicted RBP13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 ADCY5O95622 1261 aa13.53□□□□□ -0.24
RAPGEF3-202ENST00000395358 DDX17Q92841 729 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms