RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
RTN1-203ENST00000395090 NLRP7Q8WX94 980 aa15.34■□□□□ 0.05
RTN1-203ENST00000395090 MON2Q7Z3U7 1717 aa15.33■□□□□ 0.05
RTN1-203ENST00000395090 MS4A1P11836 297 aa15.33■□□□□ 0.04
RTN1-203ENST00000395090 PACS2Q86VP3 889 aa15.33■□□□□ 0.04
RTN1-203ENST00000395090 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
RTN1-203ENST00000395090 MARVELD3Q96A59 401 aa15.33■□□□□ 0.04
RTN1-203ENST00000395090 TTC21BQ7Z4L5 1316 aa15.33■□□□□ 0.04
RTN1-203ENST00000395090 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
RTN1-203ENST00000395090 ATF3P18847 181 aa15.32■□□□□ 0.04
RTN1-203ENST00000395090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
RTN1-203ENST00000395090 GGNBP2Q9H3C7 697 aa15.32■□□□□ 0.04
RTN1-203ENST00000395090 PROX2Q3B8N5 592 aa15.32■□□□□ 0.04
RTN1-203ENST00000395090 PSEN2P49810 448 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 NUDT18Q6ZVK8 323 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 EYA1Q99502 592 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 MSH6P52701 1360 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 C1orf167Q5SNV9 1468 aa15.31■□□□□ 0.04
RTN1-203ENST00000395090 ARHGAP33O14559 1287 aa15.3■□□□□ 0.04
RTN1-203ENST00000395090 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
RTN1-203ENST00000395090 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
RTN1-203ENST00000395090 TTC21AQ8NDW8 1320 aa15.3■□□□□ 0.04
RTN1-203ENST00000395090 XIRP1Q702N8 1843 aaKnown RBP15.29■□□□□ 0.04
RTN1-203ENST00000395090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.29■□□□□ 0.04
RTN1-203ENST00000395090 SSTR3P32745 418 aaPredicted RBP15.29■□□□□ 0.04
RTN1-203ENST00000395090 NME9Q86XW9 330 aa15.29■□□□□ 0.04
RTN1-203ENST00000395090 TATDN2Q93075 761 aa15.29■□□□□ 0.04
RTN1-203ENST00000395090 FAM163AQ96GL9 167 aaPredicted RBP15.29■□□□□ 0.04
RTN1-203ENST00000395090 ZBED2Q9BTP6 218 aa15.29■□□□□ 0.04
RTN1-203ENST00000395090 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
RTN1-203ENST00000395090 MST1RQ04912 1400 aa15.29■□□□□ 0.04
RTN1-203ENST00000395090 NRKQ7Z2Y5 1582 aa15.28■□□□□ 0.04
RTN1-203ENST00000395090 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
RTN1-203ENST00000395090 ANKRD26Q9UPS8 1709 aa15.27■□□□□ 0.03
RTN1-203ENST00000395090 RCCD1A6NED2 376 aa15.27■□□□□ 0.03
RTN1-203ENST00000395090 FAM205CA6NFA0 338 aa15.27■□□□□ 0.03
RTN1-203ENST00000395090 C3orf80F5H4A9 247 aa15.27■□□□□ 0.03
RTN1-203ENST00000395090 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.03
RTN1-203ENST00000395090 USP31Q70CQ4 1352 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 PBX2P40425 430 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
RTN1-203ENST00000395090 MTHFSP49914 203 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 POTEEQ6S8J3 1075 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 COG3Q96JB2 828 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 KIF20BQ96Q89 1820 aa15.26■□□□□ 0.03
RTN1-203ENST00000395090 PSME1Q06323 249 aa15.25■□□□□ 0.03
RTN1-203ENST00000395090 AATKQ6ZMQ8 1374 aa15.25■□□□□ 0.03
RTN1-203ENST00000395090 AXIN2Q9Y2T1 843 aa15.25■□□□□ 0.03
RTN1-203ENST00000395090 INSRP06213 1382 aa15.24■□□□□ 0.03
RTN1-203ENST00000395090 FOXO3O43524 673 aa15.24■□□□□ 0.03
RTN1-203ENST00000395090 ZNF687Q8N1G0 1237 aa15.24■□□□□ 0.03
RTN1-203ENST00000395090 SLAIN2Q9P270 581 aa15.24■□□□□ 0.03
RTN1-203ENST00000395090 OVOS2A0A0J9YW53 1432 aa15.23■□□□□ 0.03
RTN1-203ENST00000395090 OVOS2Q6IE36 1432 aa15.23■□□□□ 0.03
RTN1-203ENST00000395090 LTBP4Q8N2S1 1624 aa15.23■□□□□ 0.03
RTN1-203ENST00000395090 DNAJB2P25686 324 aa15.23■□□□□ 0.03
RTN1-203ENST00000395090 KIAA1468Q9P260 1216 aa15.23■□□□□ 0.03
RTN1-203ENST00000395090 SLC4A5Q9BY07 1137 aa15.22■□□□□ 0.03
RTN1-203ENST00000395090 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
RTN1-203ENST00000395090 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
RTN1-203ENST00000395090 SMAPO00193 183 aa15.21■□□□□ 0.03
RTN1-203ENST00000395090 BEGAINQ9BUH8 593 aa15.21■□□□□ 0.03
RTN1-203ENST00000395090 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.03
RTN1-203ENST00000395090 DMRTA1Q5VZB9 504 aa15.21■□□□□ 0.02
RTN1-203ENST00000395090 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.02
RTN1-203ENST00000395090 ABTB2Q8N961 1025 aa15.2■□□□□ 0.02
RTN1-203ENST00000395090 CFAP53Q96M91 514 aa15.2■□□□□ 0.02
RTN1-203ENST00000395090 RABGEF1Q9UJ41 708 aa15.2■□□□□ 0.02
RTN1-203ENST00000395090 ADAMTS8Q9UP79 889 aa15.2■□□□□ 0.02
RTN1-203ENST00000395090 FBLN1P23142 703 aa15.19■□□□□ 0.02
RTN1-203ENST00000395090 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
RTN1-203ENST00000395090 HS3ST6Q96QI5 342 aa15.19■□□□□ 0.02
RTN1-203ENST00000395090 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
RTN1-203ENST00000395090 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
RTN1-203ENST00000395090 TMEM134Q9H6X4 195 aa15.18■□□□□ 0.02
RTN1-203ENST00000395090 PIK3C2AO00443 1686 aa15.18■□□□□ 0.02
RTN1-203ENST00000395090 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
RTN1-203ENST00000395090 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
RTN1-203ENST00000395090 WDR43Q15061 677 aaKnown RBP eCLIP15.17■□□□□ 0.02
RTN1-203ENST00000395090 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
RTN1-203ENST00000395090 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
RTN1-203ENST00000395090 HNRNPUQ00839 825 aaKnown RBP eCLIP15.16■□□□□ 0.02
RTN1-203ENST00000395090 COL3A1P02461 1466 aaPredicted RBP15.15■□□□□ 0.02
RTN1-203ENST00000395090 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
RTN1-203ENST00000395090 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
RTN1-203ENST00000395090 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
RTN1-203ENST00000395090 SULF1Q8IWU6 871 aa15.15■□□□□ 0.02
RTN1-203ENST00000395090 EMILIN1Q9Y6C2 1016 aa15.15■□□□□ 0.02
RTN1-203ENST00000395090 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
RTN1-203ENST00000395090 POTEB3A0JP26 581 aa15.14■□□□□ 0.01
RTN1-203ENST00000395090 POTEBQ6S5H4 581 aa15.14■□□□□ 0.01
RTN1-203ENST00000395090 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
RTN1-203ENST00000395090 VPS9D1Q9Y2B5 631 aa15.14■□□□□ 0.01
RTN1-203ENST00000395090 BLMP54132 1417 aaPredicted RBP15.14■□□□□ 0.01
RTN1-203ENST00000395090 RRS1Q15050 365 aaKnown RBP15.14■□□□□ 0.01
RTN1-203ENST00000395090 LCE2DQ5TA82 110 aaPredicted RBP15.14■□□□□ 0.01
RTN1-203ENST00000395090 NUTM2GQ5VZR2 741 aa15.14■□□□□ 0.01
RTN1-203ENST00000395090 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms